Why is faketime command skipping section of code - c++

I have a cpp code that I'm trying to run with faketime command. I'm running it on two identical computers. They're both running RHEL 7. I noticed that when I run my code, on one computer, it totally skips my popen call.
My code is essentially
char ntp[]= "192.168.1.200";
FILE *jitter;
char line[100];
char *start;
char * eol;
char pps[] = "NTPS";
jitter = popen("chronyc sources", "r");
int i;
cout<<"reached here"<<endl;
while(fgets(line,sizeof(line),jitter))
{
cout<<"line is\n"<<line<<endl;
if(strstr(line,pps)){
start = strpbrk(line,"#0+-");
cout<<"PPS is "<<start<<endl;
//find new line character and replace it with comma
eol = strrchr(start,'\n');
i=eol-start;
start[i]=',';
myfile<<start;
}
if(strstr(line,ntp)){
myfile<<start;
}
}
pclose(jitter);
}
I added a print statement of
cout<<"reached here"<<endl;
but when I run it with "faketime 'last friday 5pm' ./code", on one computer it never reaches the print statement for some reason while on the other it does. I searched online to no success (I'm not running a approximating algorithm, they have the same compiler and make file, etc. I'm literally doing a git pull of the code and running it).
Does anyone know why?
Thanks

So it appears the issue was with SELinux. Apparently chrony doesn't interact well when SELinux is in enforced mode. I switched it to permissive and it behaves as expected now. I can call faketime 'last friday 5pm' chronyc sources as well as use it in my popen code

Related

GDB Skips While Loop Condition When Used With File Input

Alright Stack Overflow, I am running into a decently persistent problem in my C++ code. I'm sure this is one of those dumb mistake moments, but I have tried everything and cannot seem to squish this bug.
I have a bit of code here, and it's behavior is very odd. I have a main function that opens a file containing text I want to read in. I was taught in programming fundamentals class at my university that I could use getline() as a condition for the while loop, which is nice since it automatically terminates when it reaches the end of the file.
#include <iostream>
#include <fstream>
using namespace std;
int main()
{
fstream input_mem_traces("gcc.txt");
string trace_to_parse = "";
while(getline(input_mem_traces, trace_to_parse))
{
cout << trace_to_parse << endl;
}
}
When I compile and run it, it works just fine. It reads out every single line of the file I pass it, and returns with no problems.
However, when I try to use gdb, and set a breakpoint at the line
cout << trace_to_parse << endl;
it didn't hit the breakpoint. Curious as to why that was, I broke above the loop, and tried single stepping through the code. When I got to the while loop, and tried to step, it simply skipped to the line after it, which happened to be the end of the program.
This behavior occurs both using the VSCode GUI front end for gdb, as well as straight gdb from the command line. I am running this on Windows using Ubuntu under WSL2, and VSCode as my IDE with the Remote - WSL extension enabled.
Turns out there was some weirdness going on with the working directory with GDB. For some reason, my working directory was changing under the VSCode GUI, thus the file was not able to be opened, and the while loop condition performed as expected for that circumstance by not entering the loop. Upon the recommendation by Retired Ninja in the comments, I used an absolute path in the fstream object constructor, and that solved the issue.

Running the command line dot program from a Qt application generates no output, what is wrong?

I have an app that generates a dependencies.dot file which I then want to convert to an SVG image.
When I do that from a simple application like so:
int main(int argc, char * argv[])
{
system("dot -Tsvg ../BUILD/dependencies.dot > ../BUILD/dependencies.svg");
return 0;
}
It works great. The SVG image is present and working.
When I instead run it from my Qt application, the SVG file is created (by the shell), but it remains empty.
Any idea what could prevent dot from outputting data to its stdout?
Just in case, I also tried a cat to send the input through stdin instead of a filename:
system("cat ../BUILD/dependencies.dot | dot -Tsvg > ../BUILD/dependencies.svg");
And that didn't make any differences.
Also using the full path (/usr/bin/dot) did not help either.
Another test, I tried to use popen() and the first fread() immediately returns 0 (i.e. the mark of EOF).
It may not be Qt, but something is interacting with dot's ability to do anything. Any pointers on why that is would be wonderful.
Maybe an important note? I start my app. from a console, so stdin, stdout and stderr should all work as expected. I actually can see debug logs appearing there and other apps seem to work just as expected (i.e. My Qt app. can successfully run make, for example).
Here is an example of the resulting SVG (when I don't run it from within my Qt app):
For reference, the source code can be found on github. This is part of the snapbuilder. A tool that I use to run a build on launchpad. It's still incomplete, but it's getting there.
https://github.com/m2osw/snapcpp/tree/master/snapbuilder
The specific function to look for: project::generate_svg().
I still have no clue what side effect Qt has on system() that the dot command would fail. However, if using my own fork() + execve(), then it works.
I wanted a new process class for my environment, so I implemented that. This newer version is using FIFOs or directly opening closing files that it passes to the process.
...
// write the script in `std::stringstream dot` then:
//
std::string script(dot.str());
g_dot_process = std::make_shared<cppprocess::process>("dependencies");
g_dot_process->set_command("/usr/bin/dot");
g_dot_process->add_argument("-Tsvg");
g_dot_process->add_input(cppprocess::buffer_t(script.data(),
script.data() + script.length()));
g_dot_process->set_capture_output();
g_dot_process->set_output_capture_done(output_captured);
g_dot_process->start(); // TODO: check return value for errors
...
// and in output_captured()
//
void snap_builder::svg_ready(std::string const & svg)
{
std::string const svg_filename(...);
{
std::ofstream out;
out.open(svg_filename);
if(!out.is_open())
{
std::cerr << "error: \n";
return;
}
out.write(svg.c_str(), svg.size());
}
dependency_tree->load(QString::fromUtf8(svg_filename.c_str()));
}
Now the dot file is generated and displayed as expected.
This is rather strange since most everything else I've done with a simple system() call works as expected. There must be something about stdin or stdout that makes dot not do its work.

Should C++ file read be slower than Ruby or C#?

Completely new to C++.
I'm comparing various aspects of C++, C# and Ruby to see if there's need for mirroring a library. Currently, simple read of a file (post update).
Compiling C++ and C# in VS 2017. C++ is in release(x64) mode (or at least compile then run)
The libraries more or less read a file and split the lines into three which make up the members of an object which are then stored in an array member.
For stress testing I tried a large file 380MB(7M lines) (after update) now getting similar performance with C++ and Ruby,
Purely reading the file and doing nothing else the performance is as below:
Ruby: 7s
C#: 2.5s
C++: 500+s (stopped running after awhile, something's clearly wrong)
C++(release build x64): 7.5s
The code:
#Ruby
file = File.open "test_file.txt"
while !file.eof
line = file.readline
end
//C#
StreamReader file = new StreamReader("test_file.txt");
file.Open();
while((line = file.ReadLine()) != null){
}
//C++
#include "stdafx.h"
#include "string"
#include "iostream"
#include "ctime"
#include "fstream"
int main()
{
std::ios::sync_with_stdio(false);
std::ifstream file;
file.open("c:/sandboxCPP/test_file.txt");
std::string line;
std::clock_t start;
double duration;
start = std::clock();
while (std::getline(file, line)) {
}
duration = (std::clock() - start) / (double)CLOCKS_PER_SEC;
std::cout << "\nDuration: " << duration;
while (true)
{
}
return 0;
}
Edit: The following performed incredibly well. 0.03s
vector<string> lines;
string tempString = str.str();
boost::split(lines, tempString, boost::is_any_of("\n"));
start = clock();
cout << "\nCount: " << lines.size();
int count = lines.size();
string s;
for (int i = 0; i < count; i++) {
s = lines[i];
}
s = on the likelihood that I don't know what boost is doing. Changed performance.
Tested with a cout of a random record at the end of the loop.
Thanks
Based on the comments and the originally posted code (it has now been fixed [now deleted]) there was previously a coding error (i++ missing) that stopped the C++ program from outputting anything. This plus the while(true) loop in the complete code sample would present symptoms consistent with those stated in the question (i.e. user waits 500s sees no output and force terminates the program). This is because it would complete reading the file without outputting anything and enter into the deliberately added infinite loop.
The revised complete source code correctly completes (according to the comments) in ~1.6s for a 1.2 million file. My advice for improving performance would be as follows:
Make sure you are compiling in release mode (not debug mode). Given the user has specified they are using Visual Studio 2017, I would recommend viewing the official Microsoft documentation (https://msdn.microsoft.com/en-us/library/wx0123s5.aspx) for a thorough explanation.
To make it easier to diagnose problems do not add an infinite loop at the end of your program. Instead run the executable from powershell / (cmd) and confirm that it terminates correctly.
EDIT: I would also add:
For accurate timings you also need to take into account the OS disk cache. Run each benchmark multiple times to 'warm-up' the disk cache.
C++ doesn’t automatically write everything the instant you tell it to. Instead, it buffers the data so it can write it all at once, which is usually faster. To say “I really want to write this now.”, you need to say something like std::cout << std::flush (if you use std::endl to end your lines it does this automatically).
Usually you don’t need to do this; the buffers are flushed when the program exits, or when you ask for input from the user, or things like that. However, your program doesn’t exit, so it never flushes its buffer. You read the input, and then the program is executing while(true) forever, never giving the output.
The solution to this is simple: remove the while loop at the end of the program. You should not have that; people usually assume a console program exits when it’s finished. I would’ve guessed you had that because Visual Studio automatically closed the console window when the program was finished, but apparently it doesn’t do that with Ctrl+F5, which you use, so I’m not sure.

C++ Opening file with *i pointer, Overrides in Linux but not in Windows

So I've got this program working in Windows, and I'm trying to make it also work on a Linux machine. I believe the Linux machine is running an outdated version of g++ compiler but that is out of my control. Anyway, heres my function:
for (vector<string>::iterator i = groups.begin(); i != groups.end(); ++i)
{
inStream.open((*i + "List.txt").c_str());
while (getline(inStream, next))
{
if (next == n) {
memberOf.push_back(*i);
}
}
inStream.close();
}
The issue lies with the inStream.open() call. In windows this works fine, but in Linux it seems that *i (for example lets say that *i is pointing to "Tigers") is being overridden and therefore the call is just inStream.open("List.txt"); as opposed to inStream.open("TigersList.txt");
I've tried various ways of solving this, such as setting string k = *i; which works in itself in the sense that if I call cout << k; it prints "Tigers". However as soon as I try to concatenate "List.txt" to the end it just overrides "Tigers" and I'm left with only "List.txt"
ex:
k += "List.txt";
k.append("List.txt");
etc. Nothing seems to work in Linux, however everything I've tried has the same (correct) end result in windows.
What am I doing wrong???
Edit: inStream is an ifStream object.
memberOf is another vector of strings.
It sounds like you are reading Tigers from a file that contains Windows line endings. If you read this file in Linux, then reading the line:
Tigers\r\n
will result in your string in memory being Tigers\r. Then when you concatenate to it, even though the result actually ends up being Tigers\rList.txt, when you print it out then your terminal treats \r as carriage return and so List.txt overwrites Tigers on your screen.
Of course, opening the file fails because the filename didn't contain an embedded \r.
To fix this you could do one of the following:
In Linux, make sure that the file you're opening has Linux line endings (e.g. run dos2unix on it)
Update your program to look for and discard a \r on the end of a line that it has read from the file.

pidof from a background script for another background process

I wrote a c++ program to check if a process is running or not . this process is independently launched at background . my program works fine when I run it on foreground but when I time schedule it, it do not work .
int PID= ReadCommanOutput("pidof /root/test/testProg1"); /// also tested with pidof -m
I made a script in /etc/cron.d/myscript to time schedule it as follows :-
45 15 * * * root /root/ProgramMonitor/./testBkg > /root/ProgramMonitor/OutPut.txt
what could be the reason for this ?
string ReadCommanOutput(string command)
{
string output="";
int its=system((command+" > /root/ProgramMonitor/macinfo.txt").c_str());
if(its==0)
{
ifstream reader1("/root/ProgramMonitor/macinfo.txt",fstream::in);
if(!reader1.fail())
{
while(!reader1.eof())
{
string line;
getline(reader1,line);
if(reader1.fail())// for last read
break;
if(!line.empty())
{
stringstream ss(line.c_str());
ss>>output;
cout<<command<<" output = ["<<output<<"]"<<endl;
break;
}
}
reader1.close();
remove("/root/ProgramMonitor/macinfo.txt");
}
else
cout<<"/root/ProgramMonitor/macinfo.txt not found !"<<endl;
}
else
cout<<"ERROR: code = "<<its<<endl;
return output;
}
its output coming as "ERROR: code = 256"
thanks in advacee .
If you really wanted to pipe(2), fork(2), execve(2) then read the output of a pidof command, you should at least use popen(3) since ReadCommandOutput is not in the Posix API; at the very least
pid_t thepid = 0;
FILE* fpidof = popen("pidof /root/test/testProg1");
if (fpidof) {
int p=0;
if (fscanf(fpidof, "%d", &p)>0 && p>0)
thepid = (pid_t)p;
pclose(fpidof);
}
BTW, you did not specify what should happen if several processes (or none) are running the testProg1....; you also need to check the result of pclose
But you don't need to; actually you'll want to build, perhaps using snprintf, the pidof command (and you should be scared of code injection into that command, so quote arguments appropriately). You could simply find your command by accessing the proc(5) file system: you would opendir(3) on "/proc/", then loop on readdir(3) and for every entry which has a numerical name like 1234 (starts with a digit) readlink(2) its exe entry like e.g. /proc/1234/exe ...). Don't forget the closedir and test every syscall.
Please read Advanced Linux Programming
Notice that libraries like Poco or toolkits like Qt (which has a layer QCore without any GUI, and providing QProcess ....) could be useful to you.
As to why your pidof is failing, we can't guess (perhaps a permission issue, or perhaps there is no more any process like you want). Try to run it as root in another terminal at least. Test its exit code, and display both its stdout & stderr at least for debugging purposes.
Also, a better way (assuming that testProg1 is some kind of a server application, to be run in at most one single process) might be to define different conventions. Your testProg1 might start by writing its own pid into /var/run/testProg1.pid and your current application might then read the pid from that file and check, with kill(2) and a 0 signal number, that the process is still existing.
BTW, you could also improve your crontab(5) entry. You could make it run some shell script which uses logger(1) and (for debugging) runs pidof with its output redirected elsewhere. You might also read the mail perhaps sent to root by cron.
Finally I solved this problem by using su command
I have used
ReadCommanOutput("su -c 'pidof /root/test/testProg1' - root");
insteadof
ReadCommanOutput("pidof /root/test/testProg1");