After installing the apache arrow library on my computer, I tried running the c++ code example in the website (https://github.com/apache/arrow/blob/master/cpp/examples/arrow/row-wise-conversion-example.cc) but consistently kept getting the same error. I though it was because of the compiler couldnot find the arrow directory but after putting the library in the same folder as the test, it still didnt run and kept giving the same error.
g++ test.cpp
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `VectorToColumnarTable(std::vector<data_row, std::allocator<data_row> > const&, std::shared_ptr<arrow::Table>*)':
test.cpp:(.text+0x5c): undefined reference to `arrow::default_memory_pool()'
/usr/bin/ld: test.cpp:(.text+0x49b): undefined reference to `arrow::ArrayBuilder::Finish(std::shared_ptr<arrow::Array>*)'
/usr/bin/ld: test.cpp:(.text+0x555): undefined reference to `arrow::ArrayBuilder::Finish(std::shared_ptr<arrow::Array>*)'
/usr/bin/ld: test.cpp:(.text+0x60f): undefined reference to `arrow::ArrayBuilder::Finish(std::shared_ptr<arrow::Array>*)'
/usr/bin/ld: test.cpp:(.text+0x6b6): undefined reference to `arrow::int64()'
/usr/bin/ld: test.cpp:(.text+0x70b): undefined reference to `arrow::field(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<arrow::DataType> const&, bool, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: test.cpp:(.text+0x72e): undefined reference to `arrow::float64()'
/usr/bin/ld: test.cpp:(.text+0x783): undefined reference to `arrow::field(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<arrow::DataType> const&, bool, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: test.cpp:(.text+0x7a6): undefined reference to `arrow::float64()'
/usr/bin/ld: test.cpp:(.text+0x7bf): undefined reference to `arrow::list(std::shared_ptr<arrow::DataType> const&)'
/usr/bin/ld: test.cpp:(.text+0x814): undefined reference to `arrow::field(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<arrow::DataType> const&, bool, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: test.cpp:(.text+0xa1a): undefined reference to `arrow::Table::Make(std::shared_ptr<arrow::Schema> const&, std::vector<std::shared_ptr<arrow::Array>, std::allocator<std::shared_ptr<arrow::Array> > > const&, long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `ColumnarTableToVector(std::shared_ptr<arrow::Table> const&, std::vector<data_row, std::allocator<data_row> >*)':
test.cpp:(.text+0xef0): undefined reference to `arrow::int64()'
/usr/bin/ld: test.cpp:(.text+0xf45): undefined reference to `arrow::field(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<arrow::DataType> const&, bool, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: test.cpp:(.text+0xf68): undefined reference to `arrow::float64()'
/usr/bin/ld: test.cpp:(.text+0xfbd): undefined reference to `arrow::field(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<arrow::DataType> const&, bool, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: test.cpp:(.text+0xfe0): undefined reference to `arrow::float64()'
/usr/bin/ld: test.cpp:(.text+0xff9): undefined reference to `arrow::list(std::shared_ptr<arrow::DataType> const&)'
/usr/bin/ld: test.cpp:(.text+0x1048): undefined reference to `arrow::field(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<arrow::DataType> const&, bool, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: test.cpp:(.text+0x11eb): undefined reference to `arrow::Schema::Equals(arrow::Schema const&, bool) const'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::detail::Fingerprintable::Fingerprintable()':
test.cpp:(.text._ZN5arrow6detail15FingerprintableC2Ev[_ZN5arrow6detail15FingerprintableC5Ev]+0xf): undefined reference to `vtable for arrow::detail::Fingerprintable'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::DataType::DataType(arrow::Type::type)':
test.cpp:(.text._ZN5arrow8DataTypeC2ENS_4Type4typeE[_ZN5arrow8DataTypeC5ENS_4Type4typeE]+0x45): undefined reference to `vtable for arrow::DataType'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NestedType::~NestedType()':
test.cpp:(.text._ZN5arrow10NestedTypeD2Ev[_ZN5arrow10NestedTypeD5Ev]+0x26): undefined reference to `arrow::DataType::~DataType()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::ListType::ListType(std::shared_ptr<arrow::Field> const&)':
test.cpp:(.text._ZN5arrow8ListTypeC2ERKSt10shared_ptrINS_5FieldEE[_ZN5arrow8ListTypeC5ERKSt10shared_ptrINS_5FieldEE]+0x3c): undefined reference to `vtable for arrow::ListType'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Buffer::ZeroPadding()':
test.cpp:(.text._ZN5arrow6Buffer11ZeroPaddingEv[_ZN5arrow6Buffer11ZeroPaddingEv]+0x18): undefined reference to `arrow::Buffer::CheckMutable() const'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Buffer::mutable_data()':
test.cpp:(.text._ZN5arrow6Buffer12mutable_dataEv[_ZN5arrow6Buffer12mutable_dataEv]+0x18): undefined reference to `arrow::Buffer::CheckMutable() const'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::TypeTraits<arrow::Int64Type>::type_singleton()':
test.cpp:(.text._ZN5arrow10TypeTraitsINS_9Int64TypeEE14type_singletonEv[_ZN5arrow10TypeTraitsINS_9Int64TypeEE14type_singletonEv]+0x27): undefined reference to `arrow::int64()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::TypeTraits<arrow::DoubleType>::type_singleton()':
test.cpp:(.text._ZN5arrow10TypeTraitsINS_10DoubleTypeEE14type_singletonEv[_ZN5arrow10TypeTraitsINS_10DoubleTypeEE14type_singletonEv]+0x27): undefined reference to `arrow::float64()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BufferBuilder::Resize(long, bool)':
test.cpp:(.text._ZN5arrow13BufferBuilder6ResizeElb[_ZN5arrow13BufferBuilder6ResizeElb]+0x76): undefined reference to `arrow::AllocateResizableBuffer(arrow::MemoryPool*, long, std::shared_ptr<arrow::ResizableBuffer>*)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BufferBuilder::Finish(std::shared_ptr<arrow::Buffer>*, bool)':
test.cpp:(.text._ZN5arrow13BufferBuilder6FinishEPSt10shared_ptrINS_6BufferEEb[_ZN5arrow13BufferBuilder6FinishEPSt10shared_ptrINS_6BufferEEb]+0x121): undefined reference to `arrow::AllocateBuffer(arrow::MemoryPool*, long, std::shared_ptr<arrow::Buffer>*)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::ArrayBuilder::ArrayBuilder(arrow::MemoryPool*)':
test.cpp:(.text._ZN5arrow12ArrayBuilderC2EPNS_10MemoryPoolE[_ZN5arrow12ArrayBuilderC5EPNS_10MemoryPoolE]+0x17): undefined reference to `vtable for arrow::ArrayBuilder'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::ArrayBuilder::UnsafeAppendToBitmap(unsigned char const*, long)':
test.cpp:(.text._ZN5arrow12ArrayBuilder20UnsafeAppendToBitmapEPKhl[_ZN5arrow12ArrayBuilder20UnsafeAppendToBitmapEPKhl]+0x2e): undefined reference to `arrow::ArrayBuilder::UnsafeSetNotNull(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::ArrayBuilder::UnsafeAppendToBitmap(long, bool)':
test.cpp:(.text._ZN5arrow12ArrayBuilder20UnsafeAppendToBitmapElb[_ZN5arrow12ArrayBuilder20UnsafeAppendToBitmapElb]+0x2e): undefined reference to `arrow::ArrayBuilder::UnsafeSetNotNull(long)'
/usr/bin/ld: test.cpp:(.text._ZN5arrow12ArrayBuilder20UnsafeAppendToBitmapElb[_ZN5arrow12ArrayBuilder20UnsafeAppendToBitmapElb]+0x43): undefined reference to `arrow::ArrayBuilder::UnsafeSetNull(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::ArrayBuilder::~ArrayBuilder()':
test.cpp:(.text._ZN5arrow12ArrayBuilderD2Ev[_ZN5arrow12ArrayBuilderD5Ev]+0x13): undefined reference to `vtable for arrow::ArrayBuilder'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::Int64Type>::NumericBuilder<arrow::Int64Type>(std::enable_if<std::integral_constant<bool, arrow::TypeTraits<arrow::Int64Type>::is_parameter_free>::value, arrow::MemoryPool*>::type)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_9Int64TypeEEC2IS1_EENSt9enable_ifIXsrSt17integral_constantIbXsrNS_10TypeTraitsIT_EE17is_parameter_freeEE5valueEPNS_10MemoryPoolEE4typeE[_ZN5arrow14NumericBuilderINS_9Int64TypeEEC5IS1_EENSt9enable_ifIXsrSt17integral_constantIbXsrNS_10TypeTraitsIT_EE17is_parameter_freeEE5valueEPNS_10MemoryPoolEE4typeE]+0x61): undefined reference to `arrow::default_memory_pool()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::DoubleType>::NumericBuilder<arrow::DoubleType>(std::enable_if<std::integral_constant<bool, arrow::TypeTraits<arrow::DoubleType>::is_parameter_free>::value, arrow::MemoryPool*>::type)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_10DoubleTypeEEC2IS1_EENSt9enable_ifIXsrSt17integral_constantIbXsrNS_10TypeTraitsIT_EE17is_parameter_freeEE5valueEPNS_10MemoryPoolEE4typeE[_ZN5arrow14NumericBuilderINS_10DoubleTypeEEC5IS1_EENSt9enable_ifIXsrSt17integral_constantIbXsrNS_10TypeTraitsIT_EE17is_parameter_freeEE5valueEPNS_10MemoryPoolEE4typeE]+0x61): undefined reference to `arrow::default_memory_pool()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BaseListBuilder<arrow::ListType>::BaseListBuilder(arrow::MemoryPool*, std::shared_ptr<arrow::ArrayBuilder> const&)':
test.cpp:(.text._ZN5arrow15BaseListBuilderINS_8ListTypeEEC2EPNS_10MemoryPoolERKSt10shared_ptrINS_12ArrayBuilderEE[_ZN5arrow15BaseListBuilderINS_8ListTypeEEC5EPNS_10MemoryPoolERKSt10shared_ptrINS_12ArrayBuilderEE]+0x59): undefined reference to `arrow::list(std::shared_ptr<arrow::DataType> const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Status arrow::Status::FromArgs<char const (&) [33]>(arrow::StatusCode, char const (&) [33])':
test.cpp:(.text._ZN5arrow6Status8FromArgsIJRA33_KcEEES0_NS_10StatusCodeEDpOT_[_ZN5arrow6Status8FromArgsIJRA33_KcEEES0_NS_10StatusCodeEDpOT_]+0x59): undefined reference to `arrow::Status::Status(arrow::StatusCode, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Status arrow::Status::FromArgs<char const (&) [23]>(arrow::StatusCode, char const (&) [23])':
test.cpp:(.text._ZN5arrow6Status8FromArgsIJRA23_KcEEES0_NS_10StatusCodeEDpOT_[_ZN5arrow6Status8FromArgsIJRA23_KcEEES0_NS_10StatusCodeEDpOT_]+0x59): undefined reference to `arrow::Status::Status(arrow::StatusCode, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BaseListBuilder<arrow::ListType>::BaseListBuilder(arrow::MemoryPool*, std::shared_ptr<arrow::ArrayBuilder> const&, std::shared_ptr<arrow::DataType> const&)':
test.cpp:(.text._ZN5arrow15BaseListBuilderINS_8ListTypeEEC2EPNS_10MemoryPoolERKSt10shared_ptrINS_12ArrayBuilderEERKS5_INS_8DataTypeEE[_ZN5arrow15BaseListBuilderINS_8ListTypeEEC5EPNS_10MemoryPoolERKSt10shared_ptrINS_12ArrayBuilderEERKS5_INS_8DataTypeEE]+0xdd): undefined reference to `arrow::Field::WithType(std::shared_ptr<arrow::DataType> const&) const'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Status arrow::Status::FromArgs<char const (&) [26]>(arrow::StatusCode, char const (&) [26])':
test.cpp:(.text._ZN5arrow6Status8FromArgsIJRA26_KcEEES0_NS_10StatusCodeEDpOT_[_ZN5arrow6Status8FromArgsIJRA26_KcEEES0_NS_10StatusCodeEDpOT_]+0x59): undefined reference to `arrow::Status::Status(arrow::StatusCode, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > arrow::util::StringBuilder<char const (&) [33]>(char const (&) [33])':
test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x2c): undefined reference to `arrow::util::detail::StringStreamWrapper::StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x65): undefined reference to `arrow::util::detail::StringStreamWrapper::str[abi:cxx11]()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x72): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA33_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x97): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > arrow::util::StringBuilder<char const (&) [23]>(char const (&) [23])':
test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x2c): undefined reference to `arrow::util::detail::StringStreamWrapper::StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x65): undefined reference to `arrow::util::detail::StringStreamWrapper::str[abi:cxx11]()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x72): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA23_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x97): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > arrow::util::StringBuilder<char const (&) [26]>(char const (&) [26])':
test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x2c): undefined reference to `arrow::util::detail::StringStreamWrapper::StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x65): undefined reference to `arrow::util::detail::StringStreamWrapper::str[abi:cxx11]()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x72): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA26_KcEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x97): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Status arrow::Status::FromArgs<char const (&) [37], long, char const (&) [17], char const (&) [7], long const&>(arrow::StatusCode, char const (&) [37], long&&, char const (&) [17], char const (&) [7], long const&)':
test.cpp:(.text._ZN5arrow6Status8FromArgsIJRA37_KclRA17_S2_RA7_S2_RKlEEES0_NS_10StatusCodeEDpOT_[_ZN5arrow6Status8FromArgsIJRA37_KclRA17_S2_RA7_S2_RKlEEES0_NS_10StatusCodeEDpOT_]+0xbe): undefined reference to `arrow::Status::Status(arrow::StatusCode, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > arrow::util::StringBuilder<char const (&) [37], long, char const (&) [17], char const (&) [7], long const&>(char const (&) [37], long&&, char const (&) [17], char const (&) [7], long const&)':
test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x44): undefined reference to `arrow::util::detail::StringStreamWrapper::StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0xc5): undefined reference to `arrow::util::detail::StringStreamWrapper::str[abi:cxx11]()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0xd2): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA37_KclRA17_S2_RA7_S2_RKlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0xf7): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `void __gnu_cxx::new_allocator<arrow::Schema>::construct<arrow::Schema, std::vector<std::shared_ptr<arrow::Field>, std::allocator<std::shared_ptr<arrow::Field> > >&>(arrow::Schema*, std::vector<std::shared_ptr<arrow::Field>, std::allocator<std::shared_ptr<arrow::Field> > >&)':
test.cpp:(.text._ZN9__gnu_cxx13new_allocatorIN5arrow6SchemaEE9constructIS2_JRSt6vectorISt10shared_ptrINS1_5FieldEESaIS8_EEEEEvPT_DpOT0_[_ZN9__gnu_cxx13new_allocatorIN5arrow6SchemaEE9constructIS2_JRSt6vectorISt10shared_ptrINS1_5FieldEESaIS8_EEEEEvPT_DpOT0_]+0x70): undefined reference to `arrow::Schema::Schema(std::vector<std::shared_ptr<arrow::Field>, std::allocator<std::shared_ptr<arrow::Field> > > const&, std::shared_ptr<arrow::KeyValueMetadata const> const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTVN5arrow12BaseListTypeE[_ZTVN5arrow12BaseListTypeE]+0x20): undefined reference to `arrow::DataType::ComputeFingerprint[abi:cxx11]() const'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTVN5arrow12BaseListTypeE[_ZTVN5arrow12BaseListTypeE]+0x28): undefined reference to `arrow::DataType::ComputeMetadataFingerprint[abi:cxx11]() const'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTVN5arrow10NestedTypeE[_ZTVN5arrow10NestedTypeE]+0x20): undefined reference to `arrow::DataType::ComputeFingerprint[abi:cxx11]() const'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTVN5arrow10NestedTypeE[_ZTVN5arrow10NestedTypeE]+0x28): undefined reference to `arrow::DataType::ComputeMetadataFingerprint[abi:cxx11]() const'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTIN5arrow14NumericBuilderINS_10DoubleTypeEEE[_ZTIN5arrow14NumericBuilderINS_10DoubleTypeEEE]+0x10): undefined reference to `typeinfo for arrow::ArrayBuilder'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTIN5arrow14NumericBuilderINS_9Int64TypeEEE[_ZTIN5arrow14NumericBuilderINS_9Int64TypeEEE]+0x10): undefined reference to `typeinfo for arrow::ArrayBuilder'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTIN5arrow15BaseListBuilderINS_8ListTypeEEE[_ZTIN5arrow15BaseListBuilderINS_8ListTypeEEE]+0x10): undefined reference to `typeinfo for arrow::ArrayBuilder'
/usr/bin/ld: /tmp/ccvG1aV8.o:(.data.rel.ro._ZTIN5arrow10NestedTypeE[_ZTIN5arrow10NestedTypeE]+0x18): undefined reference to `typeinfo for arrow::DataType'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::DoubleType>::Resize(long)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_10DoubleTypeEE6ResizeEl[_ZN5arrow14NumericBuilderINS_10DoubleTypeEE6ResizeEl]+0x16a): undefined reference to `arrow::ArrayBuilder::Resize(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::DoubleType>::AppendNulls(long)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_10DoubleTypeEE11AppendNullsEl[_ZN5arrow14NumericBuilderINS_10DoubleTypeEE11AppendNullsEl]+0xd7): undefined reference to `arrow::ArrayBuilder::UnsafeSetNull(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::DoubleType>::FinishInternal(std::shared_ptr<arrow::ArrayData>*)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_10DoubleTypeEE14FinishInternalEPSt10shared_ptrINS_9ArrayDataEE[_ZN5arrow14NumericBuilderINS_10DoubleTypeEE14FinishInternalEPSt10shared_ptrINS_9ArrayDataEE]+0x266): undefined reference to `arrow::ArrayData::Make(std::shared_ptr<arrow::DataType> const&, long, std::vector<std::shared_ptr<arrow::Buffer>, std::allocator<std::shared_ptr<arrow::Buffer> > >&&, long, long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::Int64Type>::Resize(long)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_9Int64TypeEE6ResizeEl[_ZN5arrow14NumericBuilderINS_9Int64TypeEE6ResizeEl]+0x16a): undefined reference to `arrow::ArrayBuilder::Resize(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::Int64Type>::AppendNulls(long)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_9Int64TypeEE11AppendNullsEl[_ZN5arrow14NumericBuilderINS_9Int64TypeEE11AppendNullsEl]+0xd8): undefined reference to `arrow::ArrayBuilder::UnsafeSetNull(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::NumericBuilder<arrow::Int64Type>::FinishInternal(std::shared_ptr<arrow::ArrayData>*)':
test.cpp:(.text._ZN5arrow14NumericBuilderINS_9Int64TypeEE14FinishInternalEPSt10shared_ptrINS_9ArrayDataEE[_ZN5arrow14NumericBuilderINS_9Int64TypeEE14FinishInternalEPSt10shared_ptrINS_9ArrayDataEE]+0x266): undefined reference to `arrow::ArrayData::Make(std::shared_ptr<arrow::DataType> const&, long, std::vector<std::shared_ptr<arrow::Buffer>, std::allocator<std::shared_ptr<arrow::Buffer> > >&&, long, long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BaseListBuilder<arrow::ListType>::Resize(long)':
test.cpp:(.text._ZN5arrow15BaseListBuilderINS_8ListTypeEE6ResizeEl[_ZN5arrow15BaseListBuilderINS_8ListTypeEE6ResizeEl]+0x19a): undefined reference to `arrow::ArrayBuilder::Resize(long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BaseListBuilder<arrow::ListType>::Reset()':
test.cpp:(.text._ZN5arrow15BaseListBuilderINS_8ListTypeEE5ResetEv[_ZN5arrow15BaseListBuilderINS_8ListTypeEE5ResetEv]+0x18): undefined reference to `arrow::ArrayBuilder::Reset()'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BaseListBuilder<arrow::ListType>::FinishInternal(std::shared_ptr<arrow::ArrayData>*)':
test.cpp:(.text._ZN5arrow15BaseListBuilderINS_8ListTypeEE14FinishInternalEPSt10shared_ptrINS_9ArrayDataEE[_ZN5arrow15BaseListBuilderINS_8ListTypeEE14FinishInternalEPSt10shared_ptrINS_9ArrayDataEE]+0x568): undefined reference to `arrow::ArrayData::Make(std::shared_ptr<arrow::DataType> const&, long, std::vector<std::shared_ptr<arrow::Buffer>, std::allocator<std::shared_ptr<arrow::Buffer> > > const&, std::vector<std::shared_ptr<arrow::ArrayData>, std::allocator<std::shared_ptr<arrow::ArrayData> > > const&, long, long)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::BaseListBuilder<arrow::ListType>::type() const':
test.cpp:(.text._ZNK5arrow15BaseListBuilderINS_8ListTypeEE4typeEv[_ZNK5arrow15BaseListBuilderINS_8ListTypeEE4typeEv]+0x70): undefined reference to `arrow::Field::WithType(std::shared_ptr<arrow::DataType> const&) const'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `arrow::Status arrow::Status::FromArgs<char const (&) [47], long, char const (&) [6], long&>(arrow::StatusCode, char const (&) [47], long&&, char const (&) [6], long&)':
test.cpp:(.text._ZN5arrow6Status8FromArgsIJRA47_KclRA6_S2_RlEEES0_NS_10StatusCodeEDpOT_[_ZN5arrow6Status8FromArgsIJRA47_KclRA6_S2_RlEEES0_NS_10StatusCodeEDpOT_]+0x9c): undefined reference to `arrow::Status::Status(arrow::StatusCode, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: /tmp/ccvG1aV8.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > arrow::util::StringBuilder<char const (&) [47], long, char const (&) [6], long&>(char const (&) [47], long&&, char const (&) [6], long&)':
test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0x3e): undefined reference to `arrow::util::detail::StringStreamWrapper::StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0xad): undefined reference to `arrow::util::detail::StringStreamWrapper::str[abi:cxx11]()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0xba): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
/usr/bin/ld: test.cpp:(.text._ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_[_ZN5arrow4util13StringBuilderIJRA47_KclRA6_S2_RlEEENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEDpOT_]+0xdf): undefined reference to `arrow::util::detail::StringStreamWrapper::~StringStreamWrapper()'
collect2: error: ld returned 1 exit status
The code compiles correctly but fails to link. You need to supply the arrow library also to the g++ command:
g++ -L<directoy-of-libarrow.so> -larrow test.cpp
e.g.
g++ -L/usr/local/lib -larrow test.cpp
First step: make a file named
CMakeLists.txt
Second step: Paste the following text to the CMakeLists.txt file
cmake_minimum_required(VERSION 3.0)
project(test)
find_package(Arrow REQUIRED)
add_executable(test.o test.cpp)
target_link_libraries(test.o PRIVATE arrow_shared)
Third step:
cmake .
make
Fourth step (execute the test project):
./test.o
Related
I want to run through this demo, https://github.com/sea2357/HeDemo
I installed OpencV4.6 and made sure it was compiled and installed successfully, Since it can display images using g++ command line.
enter image description here
But when I was compiling the HeDemo project, I got an error
/home/caesar/code/HeDemo/knn.cpp:39: undefined reference to cv::Mat::Mat()' ... /usr/bin/ld: /usr/local/include/opencv4/opencv2/core/mat.hpp:3563: undefined reference to cv::Mat::~Mat()'
====================[ Build | main | Debug ]====================================
/home/caesar/clion-2020.1.3/bin/cmake/linux/bin/cmake --build /home/caesar/code/HeDemo/cmake-build-debug --target main -- -j 8
gmake[1]: Entering directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake[2]: Entering directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake[3]: Entering directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake[3]: Leaving directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake[3]: Entering directory '/home/caesar/code/HeDemo/cmake-build-debug'
[ 33%] Linking CXX executable main
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `KNN::read_mnist_image(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned long)':
/home/caesar/code/HeDemo/knn.cpp:39: undefined reference to `cv::Mat::Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:57: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:79: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `KNN::read_mnist_label(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, unsigned long)':
/home/caesar/code/HeDemo/knn.cpp:86: undefined reference to `cv::Mat::Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:99: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:116: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `KNN::test(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long)':
/home/caesar/code/HeDemo/knn.cpp:148: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:161: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:161: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:161: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o:/home/caesar/code/HeDemo/knn.cpp:161: more undefined references to `cv::Mat::~Mat()' follow
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `KNN::recognize(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long)':
/home/caesar/code/HeDemo/knn.cpp:171: undefined reference to `cv::imread(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:177: undefined reference to `cv::Mat::Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:178: undefined reference to `cv::resize(cv::_InputArray const&, cv::_OutputArray const&, cv::Size_<int>, double, double, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:179: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:180: undefined reference to `cv::threshold(cv::_InputArray const&, cv::_OutputArray const&, double, double, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:181: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:218: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:218: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:218: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:218: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:218: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o:/home/caesar/code/HeDemo/knn.cpp:218: more undefined references to `cv::Mat::~Mat()' follow
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `KNN::ciphertext_recognize(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, unsigned long)':
/home/caesar/code/HeDemo/knn.cpp:255: undefined reference to `cv::imread(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:261: undefined reference to `cv::Mat::Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:262: undefined reference to `cv::resize(cv::_InputArray const&, cv::_OutputArray const&, cv::Size_<int>, double, double, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:263: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:264: undefined reference to `cv::threshold(cv::_InputArray const&, cv::_OutputArray const&, double, double, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:265: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:355: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:355: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:355: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:355: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:355: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o:/home/caesar/code/HeDemo/knn.cpp:355: more undefined references to `cv::Mat::~Mat()' follow
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `KNN::ciphertext_recognize_compressed(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
/home/caesar/code/HeDemo/knn.cpp:393: undefined reference to `cv::imread(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:399: undefined reference to `cv::Mat::Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:400: undefined reference to `cv::resize(cv::_InputArray const&, cv::_OutputArray const&, cv::Size_<int>, double, double, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:401: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:402: undefined reference to `cv::threshold(cv::_InputArray const&, cv::_OutputArray const&, double, double, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:403: undefined reference to `cv::Mat::zeros(int, int, int)'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:506: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:506: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:506: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:506: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /home/caesar/code/HeDemo/knn.cpp:506: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o:/home/caesar/code/HeDemo/knn.cpp:506: more undefined references to `cv::Mat::~Mat()' follow
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `cv::Mat::row(int) const':
/usr/local/include/opencv4/opencv2/core/mat.inl.hpp:597: undefined reference to `cv::Mat::Mat(cv::Mat const&, cv::Range const&, cv::Range const&)'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `cv::MatExpr::operator cv::Mat() const':
/usr/local/include/opencv4/opencv2/core/mat.inl.hpp:3077: undefined reference to `cv::Mat::Mat()'
/usr/bin/ld: /usr/local/include/opencv4/opencv2/core/mat.inl.hpp:3080: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: CMakeFiles/main.dir/knn.cpp.o: in function `cv::MatExpr::~MatExpr()':
/usr/local/include/opencv4/opencv2/core/mat.hpp:3563: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /usr/local/include/opencv4/opencv2/core/mat.hpp:3563: undefined reference to `cv::Mat::~Mat()'
/usr/bin/ld: /usr/local/include/opencv4/opencv2/core/mat.hpp:3563: undefined reference to `cv::Mat::~Mat()'
collect2: error: ld returned 1 exit status
gmake[3]: *** [CMakeFiles/main.dir/build.make:101: main] Error 1
gmake[3]: Leaving directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake[2]: *** [CMakeFiles/Makefile2:76: CMakeFiles/main.dir/all] Error 2
gmake[2]: Leaving directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake[1]: *** [CMakeFiles/Makefile2:83: CMakeFiles/main.dir/rule] Error 2
gmake[1]: Leaving directory '/home/caesar/code/HeDemo/cmake-build-debug'
gmake: *** [Makefile:118: main] Error 2
I can run through the demo showing the images, so I think cmakelist.txt is not written properly
The include directory in cmakelist.txt is configured
So I think maybe the dynamic library is not set up properly
But I do not know how to write the right, check some data did not solve
I am new to linux and c++. I am trying to run veins gym on Ubuntu-18.04. When I run snakemake -jall (see the link) I receive an error:
make: Entering directory '/home/rost/serpentine-env/src'
Creating executable: out/gcc-debug//experiment_dbg
/usr/bin/ld: cannot find -lprotobuf
collect2: error: ld returned 1 exit status
Makefile:96: recipe for target 'out/gcc-debug//experiment_dbg' failed
make: *** [out/gcc-debug//experiment_dbg] Error 1
make: Leaving directory '/home/rost/serpentine-env/src'
[Thu Dec 30 12:34:46 2021]
Error in rule build:
jobid: 1
output: src/experiment_dbg
shell:
make -j8 -C src MODE=debug
(one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)
Shutting down, this might take some time.
Exiting because a job execution failed. Look above for error message
Complete log: /home/rost/serpentine-env/.snakemake/log/2021-12-30T123446.742985.snakemake.log
To obtain a little more information, I run (source)
ld -lprotobuf --verbose
and I get
attempt to open //usr/local/lib/x86_64-linux-gnu/libprotobuf.so failed
attempt to open //usr/local/lib/x86_64-linux-gnu/libprotobuf.a failed
attempt to open //lib/x86_64-linux-gnu/libprotobuf.so failed
attempt to open //lib/x86_64-linux-gnu/libprotobuf.a failed
attempt to open //usr/lib/x86_64-linux-gnu/libprotobuf.so failed
attempt to open //usr/lib/x86_64-linux-gnu/libprotobuf.a failed
attempt to open //usr/lib/x86_64-linux-gnu64/libprotobuf.so failed
attempt to open //usr/lib/x86_64-linux-gnu64/libprotobuf.a failed
attempt to open //usr/local/lib64/libprotobuf.so failed
attempt to open //usr/local/lib64/libprotobuf.a failed
attempt to open //lib64/libprotobuf.so failed
attempt to open //lib64/libprotobuf.a failed
attempt to open //usr/lib64/libprotobuf.so failed
attempt to open //usr/lib64/libprotobuf.a failed
attempt to open //usr/local/lib/libprotobuf.so failed
attempt to open //usr/local/lib/libprotobuf.a failed
attempt to open //lib/libprotobuf.so failed
attempt to open //lib/libprotobuf.a failed
attempt to open //usr/lib/libprotobuf.so failed
attempt to open //usr/lib/libprotobuf.a failed
attempt to open //usr/x86_64-linux-gnu/lib64/libprotobuf.so failed
attempt to open //usr/x86_64-linux-gnu/lib64/libprotobuf.a failed
attempt to open //usr/x86_64-linux-gnu/lib/libprotobuf.so failed
attempt to open //usr/x86_64-linux-gnu/lib/libprotobuf.a failed
ld: cannot find -lprotobuf
I guess, I would have to make symlink manually, but I do not find any .so files in the archives from protobuf. Or maybe my interpretation is wrong. If some information is missing - I will provide.
Thank you!
UPDATE:
after runningsudo apt install libprotobuf-dev, command snakemake -jall produces
make: Entering directory '/home/rost/serpentine-env/src'
Creating executable: out/gcc-debug//experiment_dbg
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:563: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:571: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:579: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:593: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:644: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:690: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:757: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:946: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:954: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:962: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:976: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1027: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1073: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1140: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::Init(veinsgym::proto::Init const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1166: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1174: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1182: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::Clear()':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1233: undefined reference to `google::protobuf::internal::ArenaStringPtr::ClearToEmpty()'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1234: undefined reference to `google::protobuf::internal::ArenaStringPtr::ClearToEmpty()'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1235: undefined reference to `google::protobuf::internal::ArenaStringPtr::ClearToEmpty()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1249: undefined reference to `google::protobuf::internal::InlineGreedyStringParser(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, char const*, google::protobuf::internal::ParseContext*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1259: undefined reference to `google::protobuf::internal::InlineGreedyStringParser(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, char const*, google::protobuf::internal::ParseContext*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1269: undefined reference to `google::protobuf::internal::InlineGreedyStringParser(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, char const*, google::protobuf::internal::ParseContext*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1284: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1335: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1371: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::MergeFrom(veinsgym::proto::Init const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.h:2983: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.h:3034: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.h:3085: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1441: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Shutdown::Shutdown(veinsgym::proto::Shutdown const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1456: undefined reference to `google::protobuf::internal::ZeroFieldsBase::~ZeroFieldsBase()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Shutdown::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1480: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1580: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1588: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1602: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1639: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1668: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1724: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1992: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2000: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2008: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2016: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2024: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
out/gcc-debug//protobuf/veinsgym.pb.o:/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2032: more undefined references to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)' follow
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2046: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2115: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2177: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2252: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::Box(google::protobuf::Arena*, bool)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2264: undefined reference to `google::protobuf::RepeatedField<double>::RepeatedField(google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2264: undefined reference to `google::protobuf::RepeatedField<double>::~RepeatedField()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::Box(veinsgym::proto::Box const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2273: undefined reference to `google::protobuf::RepeatedField<double>::RepeatedField(google::protobuf::RepeatedField<double> const&)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2273: undefined reference to `google::protobuf::RepeatedField<double>::~RepeatedField()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::~Box()':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2281: undefined reference to `google::protobuf::RepeatedField<double>::~RepeatedField()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::Clear()':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2308: undefined reference to `google::protobuf::RepeatedField<double>::Clear()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2321: undefined reference to `google::protobuf::internal::PackedDoubleParser(void*, char const*, google::protobuf::internal::ParseContext*)'
...
/home/rost/serpentine-env/src/./protobuf/veinsgym.pb.h:780: undefined reference to `google::protobuf::internal::ZeroFieldsBase::InternalSwap(google::protobuf::internal::ZeroFieldsBase*)'
out/gcc-debug//serpentine/GymSplitter.o: In function `veinsgym::proto::Shutdown::CopyFrom(veinsgym::proto::Shutdown const&)':
/home/rost/serpentine-env/src/./protobuf/veinsgym.pb.h:835: undefined reference to `google::protobuf::internal::ZeroFieldsBase::CopyImpl(google::protobuf::Message*, google::protobuf::Message const&)'
out/gcc-debug//serpentine/GymSplitter.o: In function `veinsgym::proto::Box::set_values(int, double)':
/home/rost/serpentine-env/src/./protobuf/veinsgym.pb.h:3778: undefined reference to `google::protobuf::RepeatedField<double>::Set(int, double const&)'
out/gcc-debug//serpentine/GymSplitter.o: In function `void google::protobuf::RepeatedField<double>::Add<double const*>(double const*, double const*)':
/usr/local/include/google/protobuf/repeated_field.h:705: undefined reference to `google::protobuf::RepeatedField<double>::size() const'
/usr/local/include/google/protobuf/repeated_field.h:712: undefined reference to `google::protobuf::RepeatedField<double>::elements() const'
/usr/local/include/google/protobuf/repeated_field.h:712: undefined reference to `google::protobuf::RepeatedField<double>::size() const'
/usr/local/include/google/protobuf/repeated_field.h:713: undefined reference to `google::protobuf::RepeatedField<double>::size() const'
out/gcc-debug//serpentine/GymSplitter.o: In function `google::protobuf::RepeatedField<double>::FastAdderImpl<0, true>::FastAdderImpl(google::protobuf::RepeatedField<double>*)':
/usr/local/include/google/protobuf/repeated_field.h:448: undefined reference to `google::protobuf::RepeatedField<double>::unsafe_elements() const'
out/gcc-debug//serpentine/GymSplitter.o: In function `google::protobuf::RepeatedField<double>::FastAdderImpl<0, true>::Add(double)':
/usr/local/include/google/protobuf/repeated_field.h:457: undefined reference to `google::protobuf::RepeatedField<double>::unsafe_elements() const'
collect2: error: ld returned 1 exit status
Makefile:96: recipe for target 'out/gcc-debug//experiment_dbg' failed
make: *** [out/gcc-debug//experiment_dbg] Error 1
make: Leaving directory '/home/rost/serpentine-env/src'
My code was working fine on windows, now that I am trying to compile on ubuntu 20.4; I am getting this error; I am copying part of the error as there are a lot:
after runing : mpicc C.cpp -o C
usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xb8): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_capacity(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xc4): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_data() const'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xda): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_copy_chars(char*, char*, char*)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xed): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_set_length(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x10b): undefined reference to `__cxa_begin_catch'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x117): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x11c): undefined reference to `__cxa_rethrow'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x128): undefined reference to `__cxa_end_catch'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::deallocate(int*, unsigned long)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim[_ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim]+0x20): undefined reference to `operator delete(void*)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::allocate(unsigned long, void const*)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x30): undefined reference to `std::__throw_bad_alloc()'
/usr/bin/ld: C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x40): undefined reference to `operator new(unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o:(.data.rel.ro._ZTVN3MPI3WinE[_ZTVN3MPI3WinE]+0x48): undefined reference to `MPI::Win::Free()'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Intercomm::~Intercomm()':
C.cpp:(.text._ZN3MPI9IntercommD0Ev[_ZN3MPI9IntercommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Graphcomm::~Graphcomm()':
C.cpp:(.text._ZN3MPI9GraphcommD0Ev[_ZN3MPI9GraphcommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Cartcomm::~Cartcomm()':
when I check mpirun --version: I get this : mpirun (Open MPI) 4.0.3
This error:
usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xb8): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_capacity(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xc4): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_data() const'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xda): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_copy_chars(char*, char*, char*)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xed): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_set_length(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x10b): undefined reference to `__cxa_begin_catch'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x117): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x11c): undefined reference to `__cxa_rethrow'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x128): undefined reference to `__cxa_end_catch'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::deallocate(int*, unsigned long)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim[_ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim]+0x20): undefined reference to `operator delete(void*)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::allocate(unsigned long, void const*)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x30): undefined reference to `std::__throw_bad_alloc()'
/usr/bin/ld: C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x40): undefined reference to `operator new(unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o:(.data.rel.ro._ZTVN3MPI3WinE[_ZTVN3MPI3WinE]+0x48): undefined reference to `MPI::Win::Free()'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Intercomm::~Intercomm()':
C.cpp:(.text._ZN3MPI9IntercommD0Ev[_ZN3MPI9IntercommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Graphcomm::~Graphcomm()':
C.cpp:(.text._ZN3MPI9GraphcommD0Ev[_ZN3MPI9GraphcommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Cartcomm::~Cartcomm()':
Because you are compiling with mpicc:
Compiles and links MPI programs written in C
but you should be using in this case mpic++
mpic++ -- Open MPI C++ wrapper compiler
I'm trying to build the pmp-library (https://github.com/pmp-library/pmp-library) under Ubuntu 20 in the Windows subsystem for Linux (WSL). More than half way through the build, I get lots of undefined references like this one:
[ 59%] Linking CXX executable ../../mconvert
/usr/bin/ld: CMakeFiles/mconvert.dir/mconvert.cpp.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(char const*, std::allocator<char> const&) [clone .isra.19]':
mconvert.cpp:(.text+0x86): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
I found that it might be related to the compiler version. However, as far as I understand I am compiling all dependencies myself and I get the same error using gcc/g++-6, 7, and 9 (>https://github.com/preshing/junction/issues/37>, and Converting std::__cxx11::string to std::string)
I also found that it might be related to the command used for compiling. Using gcc the c standard lib has to linked explicitly, using g++ it is linked automatically. But did not find the information in the make files.
Any idea how to fix this error? I posted the entire output below...
[ 59%] Linking CXX executable ../../mconvert
/usr/bin/ld: CMakeFiles/mconvert.dir/mconvert.cpp.o: in function `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::basic_string(char const*, std::allocator<char> const&) [clone .isra.19]':
mconvert.cpp:(.text+0x86): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_create(unsigned long&, unsigned long)'
/usr/bin/ld: mconvert.cpp:(.text+0xbc): undefined reference to `std::__throw_logic_error(char const*)'
/usr/bin/ld: CMakeFiles/mconvert.dir/mconvert.cpp.o: in function `usage_and_exit()':
mconvert.cpp:(.text+0xca): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text+0xd8): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::__ostream_insert<char, std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*, long)'
/usr/bin/ld: mconvert.cpp:(.text+0xe6): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text+0xf0): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::__ostream_insert<char, std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*, long)'
/usr/bin/ld: mconvert.cpp:(.text+0xf7): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text+0x103): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*)'
/usr/bin/ld: CMakeFiles/mconvert.dir/mconvert.cpp.o: in function `main':
mconvert.cpp:(.text.startup+0xff): undefined reference to `operator delete(void*)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x116): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x120): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::__ostream_insert<char, std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*, long)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x127): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x12f): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x13e): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x19d): undefined reference to `operator delete(void*)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x1b0): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x1ba): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::__ostream_insert<char, std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*, long)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x1c1): undefined reference to `std::cerr'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x1c9): undefined reference to `std::basic_ostream<char, std::char_traits<char> >& std::operator<< <std::char_traits<char> >(std::basic_ostream<char, std::char_traits<char> >&, char const*)'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x1ee): undefined reference to `operator delete(void*)'
/usr/bin/ld: CMakeFiles/mconvert.dir/mconvert.cpp.o: in function `_GLOBAL__sub_I__Z14usage_and_exitv':
mconvert.cpp:(.text.startup+0x21c): undefined reference to `std::ios_base::Init::Init()'
/usr/bin/ld: mconvert.cpp:(.text.startup+0x223): undefined reference to `std::ios_base::Init::~Init()'
/usr/bin/ld: CMakeFiles/mconvert.dir/mconvert.cpp.o:(.data.rel.local.DW.ref.__gxx_personality_v0[DW.ref.__gxx_personality_v0]+0x0): undefined reference to `__gxx_personality_v0'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ostream& std::ostream::_M_insert<unsigned long>(unsigned long)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_ios<char, std::char_traits<char> >::init(std::basic_streambuf<char, std::char_traits<char> >*)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ctype<char>::_M_widen_init() const'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `VTT for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::_Rb_tree_decrement(std::_Rb_tree_node_base*)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ios_base::~ios_base()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `operator new[](unsigned long)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `typeinfo for std::bad_alloc'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_end_catch'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >::~basic_ostringstream()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_ofstream<char, std::char_traits<char> >::~basic_ofstream()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_allocate_exception'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base const*)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::bad_alloc::~bad_alloc()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `atan2'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::__cxx11::basic_ostringstream<char, std::char_traits<char>, std::allocator<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ios_base::ios_base()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::compare(char const*) const'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::cout'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::basic_ios<char, std::char_traits<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::locale::locale()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_filebuf<char, std::char_traits<char> >::open(char const*, std::_Ios_Openmode)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `typeinfo for float'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ostream& std::ostream::_M_insert<double>(double)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `VTT for std::basic_ofstream<char, std::char_traits<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_guard_release'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ostream::flush()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `acos'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `typeinfo for double'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `typeinfo for bool'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ostream::put(char)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_assign(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_filebuf<char, std::char_traits<char> >::close()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::~basic_string()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::basic_streambuf<char, std::char_traits<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_pure_virtual'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_filebuf<char, std::char_traits<char> >::~basic_filebuf()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_throw_bad_array_new_length'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__dynamic_cast'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `sin'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__throw_bad_cast()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::__cxx11::basic_stringbuf<char, std::char_traits<char>, std::allocator<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `operator delete[](void*)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `sqrtf'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::clog'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_ios<char, std::char_traits<char> >::clear(std::_Ios_Iostate)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::bad_alloc'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `tan'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::_Rb_tree_rebalance_for_erase(std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_begin_catch'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_rethrow'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_throw'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::rfind(char const*, unsigned long, unsigned long) const'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::locale::~locale()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::basic_ofstream<char, std::char_traits<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `cos'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `typeinfo for int'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for __cxxabiv1::__si_class_type_info'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::basic_filebuf<char, std::char_traits<char> >::basic_filebuf()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `operator new(unsigned long)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__basic_file<char>::~__basic_file()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `sqrt'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `sincosf'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for std::basic_filebuf<char, std::char_traits<char> >'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__throw_length_error(char const*)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for __cxxabiv1::__class_type_info'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::ostream::operator<<(int)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `std::__throw_bad_alloc()'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `vtable for __cxxabiv1::__vmi_class_type_info'
/usr/bin/ld: ../../libpmp.so.1.2.1: undefined reference to `__cxa_guard_acquire'
collect2: error: ld returned 1 exit status
make[2]: *** [src/apps/CMakeFiles/mconvert.dir/build.make:85: mconvert] Error 1
make[1]: *** [CMakeFiles/Makefile2:544: src/apps/CMakeFiles/mconvert.dir/all] Error 2
make: *** [Makefile:163: all] Error 2
Try using g++ compiler for compiling like this
g++ <cpp file name> -o <desired file name>
To install it you may use
$ sudo apt-get install g++
Hope it works
I did a project in manjaro, then decided to switch to ubuntu and everything flew to hell. I've installed libpoco-dev, libtinyxml2-dev and libyaml-cpp-dev
my cmakelist file:
cmake_minimum_required(VERSION 3.13)
project(auchan_handler_microservice)
set(CMAKE_CXX_STANDARD 17)
set(GCC_COVERAGE_COMPILE_FLAGS "-Wall -Werror")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${GCC_COVERAGE_COMPILE_FLAGS}")
set(LIB_DIR "${PROJECT_SOURCE_DIR}/extern")
add_executable(auchan_handler_microservice main.cc)
include_directories(src)
add_subdirectory(src)
option(PACKAGE_TESTS "Build the tests" ON)
if (PACKAGE_TESTS)
enable_testing()
add_subdirectory(tests)
endif ()
find_package(Poco REQUIRED Foundation Net Util DataMySQL)
target_link_libraries(auchan_handler_microservice src)
target_link_libraries(auchan_handler_microservice yaml-cpp tinyxml2)
target_link_libraries(auchan_handler_microservice Poco::Net Poco::Util Poco::DataMySQL)
error:
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `Application::main(std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&)':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:29: undefined reference to `YAML::LoadFile(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:31: undefined reference to `YAML::operator<<(std::ostream&, YAML::Node const&)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::HTTPServerParams::HTTPServerParams()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::ServerSocket::ServerSocket(unsigned short, int)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::HTTPServer::HTTPServer(Poco::SharedPtr<Poco::Net::HTTPRequestHandlerFactory, Poco::ReferenceCounter, Poco::ReleasePolicy<Poco::Net::HTTPRequestHandlerFactory> >, Poco::Net::ServerSocket const&, Poco::AutoPtr<Poco::Net::HTTPServerParams>)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::ServerSocket::~ServerSocket()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:39: undefined reference to `Poco::Net::TCPServer::start()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:41: undefined reference to `Poco::Util::ServerApplication::waitForTerminationRequest()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::HTTPServer::~HTTPServer()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::ServerSocket::~ServerSocket()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.cc:38: undefined reference to `Poco::Net::HTTPServer::~HTTPServer()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `Poco::Net::Impl::IPv4SocketAddressImpl::host() const':
/usr/include/Poco/Net/SocketAddressImpl.h:81: undefined reference to `Poco::Net::IPAddress::IPAddress(void const*, unsigned int)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `Poco::Net::Impl::IPv6SocketAddressImpl::host() const':
/usr/include/Poco/Net/SocketAddressImpl.h:143: undefined reference to `Poco::Net::IPAddress::IPAddress(void const*, unsigned int, unsigned int)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::Exception::Exception(YAML::Mark const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
/usr/include/yaml-cpp/exceptions.h:122: undefined reference to `vtable for YAML::Exception'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::RepresentationException::RepresentationException(YAML::Mark const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
/usr/include/yaml-cpp/exceptions.h:155: undefined reference to `vtable for YAML::RepresentationException'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::InvalidNode::InvalidNode()':
/usr/include/yaml-cpp/exceptions.h:198: undefined reference to `vtable for YAML::InvalidNode'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::BadSubscript::BadSubscript()':
/usr/include/yaml-cpp/exceptions.h:228: undefined reference to `vtable for YAML::BadSubscript'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::detail::memory_holder::create_node()':
/usr/include/yaml-cpp/node/detail/memory.h:37: undefined reference to `YAML::detail::memory::create_node()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::detail::node_ref::mark_defined()':
/usr/include/yaml-cpp/node/detail/node_ref.h:30: undefined reference to `YAML::detail::node_data::mark_defined()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::detail::node_ref::set_null()':
/usr/include/yaml-cpp/node/detail/node_ref.h:36: undefined reference to `YAML::detail::node_data::set_null()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::detail::node_ref::set_scalar(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
/usr/include/yaml-cpp/node/detail/node_ref.h:37: undefined reference to `YAML::detail::node_data::set_scalar(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::Node::EnsureNodeExists() const':
/usr/include/yaml-cpp/node/impl.h:54: undefined reference to `YAML::InvalidNode::~InvalidNode()'
/usr/bin/ld: /usr/include/yaml-cpp/node/impl.h:54: undefined reference to `typeinfo for YAML::InvalidNode'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::Node::Type() const':
/usr/include/yaml-cpp/node/impl.h:78: undefined reference to `YAML::InvalidNode::~InvalidNode()'
/usr/bin/ld: /usr/include/yaml-cpp/node/impl.h:78: undefined reference to `typeinfo for YAML::InvalidNode'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::Node::Scalar[abi:cxx11]() const':
/usr/include/yaml-cpp/node/impl.h:158: undefined reference to `YAML::InvalidNode::~InvalidNode()'
/usr/bin/ld: /usr/include/yaml-cpp/node/impl.h:158: undefined reference to `typeinfo for YAML::InvalidNode'
/usr/bin/ld: /usr/include/yaml-cpp/node/impl.h:159: undefined reference to `YAML::detail::node_data::empty_scalar[abi:cxx11]'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `void YAML::Node::Assign<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
/usr/include/yaml-cpp/node/impl.h:222: undefined reference to `YAML::InvalidNode::~InvalidNode()'
/usr/bin/ld: /usr/include/yaml-cpp/node/impl.h:222: undefined reference to `typeinfo for YAML::InvalidNode'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `HandlerFactory::HandlerFactory()':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler_factory/handler_factory.h:9: undefined reference to `Poco::Net::HTTPRequestHandlerFactory::HTTPRequestHandlerFactory()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::Node YAML::Node::operator[]<char [5]>(char const (&) [5])':
/usr/include/yaml-cpp/node/impl.h:388: undefined reference to `YAML::InvalidNode::~InvalidNode()'
/usr/bin/ld: /usr/include/yaml-cpp/node/impl.h:388: undefined reference to `typeinfo for YAML::InvalidNode'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::detail::node& YAML::detail::node_data::get<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<YAML::detail::memory_holder>)':
/usr/include/yaml-cpp/node/detail/impl.h:112: undefined reference to `YAML::detail::node_data::convert_to_map(std::shared_ptr<YAML::detail::memory_holder>)'
/usr/bin/ld: /usr/include/yaml-cpp/node/detail/impl.h:115: undefined reference to `YAML::BadSubscript::~BadSubscript()'
/usr/bin/ld: /usr/include/yaml-cpp/node/detail/impl.h:115: undefined reference to `typeinfo for YAML::BadSubscript'
/usr/bin/ld: /usr/include/yaml-cpp/node/detail/impl.h:126: undefined reference to `YAML::detail::node_data::insert_map_pair(YAML::detail::node&, YAML::detail::node&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `YAML::detail::node& YAML::detail::node_data::convert_to_node<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::shared_ptr<YAML::detail::memory_holder>)':
/usr/include/yaml-cpp/node/detail/impl.h:179: undefined reference to `YAML::detail::memory_holder::merge(YAML::detail::memory_holder&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x20): undefined reference to `Poco::Util::Application::name() const'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x28): undefined reference to `Poco::Util::Application::initialize(Poco::Util::Application&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x30): undefined reference to `Poco::Util::Application::uninitialize()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x38): undefined reference to `Poco::Util::Application::reinitialize(Poco::Util::Application&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x40): undefined reference to `Poco::Util::ServerApplication::defineOptions(Poco::Util::OptionSet&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x48): undefined reference to `Poco::Util::ServerApplication::run()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTV11Application[_ZTV11Application]+0x50): undefined reference to `Poco::Util::Application::handleOption(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `Application::~Application()':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/server_application/app.h:11: undefined reference to `Poco::Util::ServerApplication::~ServerApplication()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTVN4Poco3Net4Impl21IPv6SocketAddressImplE[_ZTVN4Poco3Net4Impl21IPv6SocketAddressImplE]+0x50): undefined reference to `Poco::Net::Impl::IPv6SocketAddressImpl::toString[abi:cxx11]() const'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `Poco::Net::Impl::IPv6SocketAddressImpl::~IPv6SocketAddressImpl()':
/usr/include/Poco/Net/SocketAddressImpl.h:118: undefined reference to `Poco::Net::Impl::SocketAddressImpl::~SocketAddressImpl()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTVN4Poco3Net4Impl21IPv4SocketAddressImplE[_ZTVN4Poco3Net4Impl21IPv4SocketAddressImplE]+0x50): undefined reference to `Poco::Net::Impl::IPv4SocketAddressImpl::toString[abi:cxx11]() const'
/usr/bin/ld: ../src/libsrc.a(app.cc.o): in function `Poco::Net::Impl::IPv4SocketAddressImpl::~IPv4SocketAddressImpl()':
/usr/include/Poco/Net/SocketAddressImpl.h:56: undefined reference to `Poco::Net::Impl::SocketAddressImpl::~SocketAddressImpl()'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTIN4Poco3Net4Impl21IPv6SocketAddressImplE[_ZTIN4Poco3Net4Impl21IPv6SocketAddressImplE]+0x10): undefined reference to `typeinfo for Poco::Net::Impl::SocketAddressImpl'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTIN4Poco3Net4Impl21IPv4SocketAddressImplE[_ZTIN4Poco3Net4Impl21IPv4SocketAddressImplE]+0x10): undefined reference to `typeinfo for Poco::Net::Impl::SocketAddressImpl'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.ro._ZTI11Application[_ZTI11Application]+0x10): undefined reference to `typeinfo for Poco::Util::ServerApplication'
/usr/bin/ld: ../src/libsrc.a(app.cc.o):(.data.rel.local.DW.ref._ZTIN4YAML9ExceptionE[DW.ref._ZTIN4YAML9ExceptionE]+0x0): undefined reference to `typeinfo for YAML::Exception'
/usr/bin/ld: ../src/libsrc.a(handler_factory.cc.o): in function `RequestHandler::RequestHandler()':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.h:9: undefined reference to `Poco::Net::HTTPRequestHandler::HTTPRequestHandler()'
/usr/bin/ld: ../src/libsrc.a(handler_factory.cc.o): in function `HandlerFactory::~HandlerFactory()':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler_factory/handler_factory.h:9: undefined reference to `Poco::Net::HTTPRequestHandlerFactory::~HTTPRequestHandlerFactory()'
/usr/bin/ld: ../src/libsrc.a(handler_factory.cc.o):(.data.rel.ro._ZTI14HandlerFactory[_ZTI14HandlerFactory]+0x10): undefined reference to `typeinfo for Poco::Net::HTTPRequestHandlerFactory'
/usr/bin/ld: ../src/libsrc.a(request_handler.cc.o): in function `RequestHandler::handleRequest(Poco::Net::HTTPServerRequest&, Poco::Net::HTTPServerResponse&)':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:20: undefined reference to `Poco::Net::HTTPMessage::getContentLength() const'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:22: undefined reference to `Poco::Net::HTTPResponse::setStatus(Poco::Net::HTTPResponse::HTTPStatus)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:24: undefined reference to `Poco::Net::HTTPMessage::getContentLength() const'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:27: undefined reference to `Poco::Net::HTTPRequest::HTTP_POST[abi:cxx11]'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:29: undefined reference to `Poco::Net::HTTPMessage::getContentLength() const'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:32: undefined reference to `tinyxml2::XMLDocument::XMLDocument(bool, tinyxml2::Whitespace)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:33: undefined reference to `tinyxml2::XMLDocument::Parse(char const*, unsigned long)'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:36: undefined reference to `tinyxml2::XMLElement::GetText() const'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:32: undefined reference to `tinyxml2::XMLDocument::~XMLDocument()'
/usr/bin/ld: /home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.cc:32: undefined reference to `tinyxml2::XMLDocument::~XMLDocument()'
/usr/bin/ld: ../src/libsrc.a(request_handler.cc.o): in function `RequestHandler::~RequestHandler()':
/home/sschiz/CLionProjects/auchan-handler-microservice/src/request_handler/request_handler.h:9: undefined reference to `Poco::Net::HTTPRequestHandler::~HTTPRequestHandler()'
/usr/bin/ld: ../src/libsrc.a(request_handler.cc.o):(.data.rel.ro._ZTI14RequestHandler[_ZTI14RequestHandler]+0x10): undefined reference to `typeinfo for Poco::Net::HTTPRequestHandler'
collect2: error: ld returned 1 exit status
make[2]: *** [tests/CMakeFiles/list_status_path_test.dir/build.make:100: tests/list_status_path_test] Ошибка 1
make[1]: *** [CMakeFiles/Makefile2:190: tests/CMakeFiles/list_status_path_test.dir/all] Ошибка 2
make: *** [Makefile:141: all]