Successful Makefile fails with "identical" CMake in CLion - c++

I am trying to use CLion to work with IBM ILOG CPLEX 12.7.1 on my Mac OS 10.13.1 (macOS High Sierra). Here is a very simple piece of C++ code.
#include <iostream>
#include <ilcplex/ilocplex.h>
using namespace std;
int main() {
std::cout << "Hello, World!" << std::endl;
IloEnv env;
x: IloCplex cplex(env);
std::cout << env.getVersion() << endl;
return 0;
}
The following in my Makefile.
SYSTEM = x86-64_osx
LIBFORMAT = static_pic
CPLEXDIR = /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex
CONCERTDIR = /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/concert
# ---------------------------------------------------------------------
# Compiler selection
# ---------------------------------------------------------------------
CCC = clang++ -O0
# ---------------------------------------------------------------------
# Compiler options
# ---------------------------------------------------------------------
CCOPT = -m64 -O -fPIC -fexceptions -DNDEBUG -DIL_STD -stdlib=libc++
# ---------------------------------------------------------------------
# Link options and libraries
# ---------------------------------------------------------------------
CPLEXBINDIR = $(CPLEXDIR)/bin/$(BINDIST)
CPLEXLIBDIR = $(CPLEXDIR)/lib/$(SYSTEM)/$(LIBFORMAT)
CONCERTLIBDIR = $(CONCERTDIR)/lib/$(SYSTEM)/$(LIBFORMAT)
CCLNDIRS = -L$(CPLEXLIBDIR) -L$(CONCERTLIBDIR)
CCLNFLAGS = -lconcert -lilocplex -lcplex -lm -lpthread -ldl #-framework CoreFoundation -framework IOKit -stdlib=libc++
all:
make main
CONCERTINCDIR = $(CONCERTDIR)/include
CPLEXINCDIR = $(CPLEXDIR)/include
CCFLAGS = $(CCOPT) -I$(CPLEXINCDIR) -I$(CONCERTINCDIR)
# ------------------------------------------------------------
main: main.o
$(CCC) $(CCFLAGS) $(CCLNDIRS) -o main main.o $(CCLNFLAGS)
main.o: ./main.cpp
$(CCC) -c $(CCFLAGS) ./main.cpp -o main.o
Here is the CMakeLists.txt, which I have tried to create it with parameters exactly as mentioned in the Makefile.
cmake_minimum_required(VERSION 3.14)
project(cplextest)
add_executable(cplextest main.cpp)
set(CMAKE_CXX_COMPILER clang++)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m64 -O -fPIC -fexceptions -DNDEBUG -DIL_STD -stdlib=libc++")
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex/include/)
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex/include/ilcplex)
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/concert/include)
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/concert/include/ilconcert)
find_library(lib1 NAMES libcplex.a PATHS /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex/lib/x86-64_osx/static_pic/)
find_library(lib2 NAMES libilocplex.a PATHS /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex/lib/x86-64_osx/static_pic/)
find_library(lib3 NAMES libcplexdistmip.a PATHS /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex/lib/x86-64_osx/static_pic/)
set (CMAKE_SHARED_LINKER_FLAGS "-lconcert -lilocplex -lcplex -lm -lpthread -ldl #-framework CoreFoundation -framework IOKit -stdlib=libc++")
target_link_libraries(cplextest PUBLIC ${lib1})
target_link_libraries(cplextest PUBLIC ${lib2})
target_link_libraries(cplextest PUBLIC ${lib3})
However, while Makefile works flawlessly (i.e., I can successfully run my program from a terminal), CLion produces the following error messages.
====================[ Build | cplextest | Debug ]===============================
/Applications/CLion.app/Contents/bin/cmake/mac/bin/cmake --build /Users/soheilmn/CLionProjects/CplexTest/cmake-build-debug --target cplextest -- -j 2
[ 50%] Linking CXX executable cplextest
Undefined symbols for architecture x86_64:
"IloCplex::IloCplex(IloEnv)", referenced from:
_main in main.cpp.o
"IloCplexI::getVersion() const", referenced from:
_main in main.cpp.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[3]: *** [cplextest] Error 1
make[2]: *** [CMakeFiles/cplextest.dir/all] Error 2
make[1]: *** [CMakeFiles/cplextest.dir/rule] Error 2
make: *** [cplextest] Error 2
Interestingly, if I comment out the line (x) in my C++ code, I can successfully run my code from CLion. This is indeed very confusing to me, because my understanding is both procedures use clang++ and the same libraries/header files. Any help will be highly appreciated. (Sorry for the long post in advance!)
Thanks!

CMAKE_SHARED_LINKER_FLAGS specifies flags to use when creating new shared libraries. But your project doesn't create shared libraries, it creates an executable. You should just pass all the library names to target_link_libraries like this:
target_link_libraries(cplextest PUBLIC "concert;cplex;ilocplex;cplexdistmip")
Then you may need to add the library search path (/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio1271/cplex/lib/x86-64_osx/static_pic/) and it should all work. Run make VERBOSE=1 after running cmake if you want to see what linker command is actually run.
To enable pthreads, see cmake and libpthread

Special thanks go to "John Zwinck" for his help. I thought it makes sense to share the final CMake file that perfectly works with IBM ILOG CPLEX 12.9 under macOS 10.13.1 / CLion 2109.2.3. Here it is:
cmake_minimum_required(VERSION 3.14)
project(cplextest)
add_executable(cplextest main.cpp)
set(CMAKE_CXX_COMPILER clang++)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -m64 -O -fPIC -fexceptions -DNDEBUG -DIL_STD -stdlib=libc++")
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/cplex/include/)
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/cplex/include/ilcplex)
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/concert/include)
include_directories(/Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/concert/include/ilconcert)
target_link_libraries(cplextest PUBLIC /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/cplex/lib/x86-64_osx/static_pic/libcplex.a)
target_link_libraries(cplextest PUBLIC /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/cplex/lib/x86-64_osx/static_pic/libilocplex.a)
target_link_libraries(cplextest PUBLIC /Users/soheilmn/Applications/IBM/ILOG/CPLEX_Studio129/concert/lib/x86-64_osx/static_pic/libconcert.a)
set (target_link_options "-lconcert -lilocplex -lcplex -lm -lpthread -ldl -framework CoreFoundation -framework IOKit -stdlib=libc++")

Related

How to compile DPDK application such as examples to support C++?

How should I modify Makefiles of DPDK to support c++ compilation? I tried by adding CFLAGS += -lstdc++ to the Makefile of the helloworld example but it seems not working. Is there a more standard way to do that?
Edited:
I'm using the makefile of helloworld example in DPDK 20.08 with some small modifications. I'm building it on ubuntu 20.04 ,and which is not cross-compilation. The DPDK is built with dpdk-setup script and not meson. The makefile is
# SPDX-License-Identifier: BSD-3-Clause
# Copyright(c) 2010-2014 Intel Corporation
# binary name
APP = rss_helper
# all source are stored in SRCS-y
# SRCS-y := main.c
SRCS-y := test.cpp
# Build using pkg-config variables if possible
ifeq ($(shell pkg-config --exists libdpdk && echo 0),0)
all: shared
# all: static
.PHONY: shared static
shared: build/$(APP)-shared
ln -sf $(APP)-shared build/$(APP)
static: build/$(APP)-static
ln -sf $(APP)-static build/$(APP)
PKGCONF ?= pkg-config
PC_FILE := $(shell $(PKGCONF) --path libdpdk 2>/dev/null)
CFLAGS += -O3 $(shell $(PKGCONF) --cflags libdpdk)
LDFLAGS_SHARED = $(shell $(PKGCONF) --libs libdpdk)
LDFLAGS_STATIC = $(shell $(PKGCONF) --static --libs libdpdk)
build/$(APP)-shared: $(SRCS-y) Makefile $(PC_FILE) | build
$(CC) $(CFLAGS) $(SRCS-y) -o $# $(LDFLAGS) $(LDFLAGS_SHARED)
build/$(APP)-static: $(SRCS-y) Makefile $(PC_FILE) | build
$(CC) $(CFLAGS) $(SRCS-y) -o $# $(LDFLAGS) $(LDFLAGS_STATIC)
build:
#mkdir -p $#
.PHONY: clean
clean:
rm -f build/$(APP) build/$(APP)-static build/$(APP)-shared
test -d build && rmdir -p build || true
else
ifeq ($(RTE_SDK),)
$(error "Please define RTE_SDK environment variable")
endif
# Default target, detect a build directory, by looking for a path with a .config
RTE_TARGET ?= $(notdir $(abspath $(dir $(firstword $(wildcard $(RTE_SDK)/*/.config)))))
include $(RTE_SDK)/mk/rte.vars.mk
CPPFLAGS += -O3
CPPFLAGS += $(WERROR_FLAGS)
CPPFLAGS += -DALLOW_EXPERIMENTAL_API
CPPFLAGS += -lstdc++
include $(RTE_SDK)/mk/rte.extapp.mk
endif
I changed the name of the source file and flags. The source file test.cpp contains only iostream header and an empty main function (just for test). There are two errors:
can't find the test.cpp with cpp on. It works find when replace test.cpp in makefile with test.c while keeping the actual source file name as test.cpp.
LD rss_helper
gcc: error: test.cpp: No such file or directory
make[1]: *** [/home/syk/dpdk-20.08/mk/rte.app.mk:456: rss_helper] Error 1
make: *** [/home/syk/dpdk-20.08/mk/rte.extapp.mk:15: all] Error 2
Error for LD like below
g++ -O3 -W -Wall -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wold-style-definition -Wpointer-arith -Wcast-align -Wnested-externs -Wcast-qual -Wformat-nonliteral -Wformat-security -Wundef -Wwrite-strings -Wdeprecated -Wno-missing-field-initializers -Wimplicit-fallthrough=2 -Wno-format-truncation -Wno-address-of-packed-member -DALLOW_EXPERIMENTAL_API -lstdc++ -c -o test.o /home/syk/loadbalancing/rss_helper_demo/test.cpp
cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
cc1plus: warning: command line option ‘-Wmissing-prototypes’ is valid for C/ObjC but not for C++
cc1plus: warning: command line option ‘-Wold-style-definition’ is valid for C/ObjC but not for C++
cc1plus: warning: command line option ‘-Wnested-externs’ is valid for C/ObjC but not for C++
LD rss_helper
/usr/bin/ld: test.o: in function `_GLOBAL__sub_I_main':
test.cpp:(.text.startup+0x20): undefined reference to `std::ios_base::Init::Init()'
/usr/bin/ld: test.cpp:(.text.startup+0x27): undefined reference to `std::ios_base::Init::~Init()'
collect2: error: ld returned 1 exit status
make[1]: *** [/home/syk/dpdk-20.08/mk/rte.app.mk:456: rss_helper] Error 1
make: *** [/home/syk/dpdk-20.08/mk/rte.extapp.mk:15: all] Error 2
I tried to resolve it by added -lstdc++ but still had it.
Edited-2:
The source file:
#include <iostream>
#include <rte_eal.h>
using namespace std;
class A{
int a;
};
int
main(void){
return 0;
}
It can't include iostream and rte_eal either.
there are 2 possible ways to solve this issue
set environment set CC=g++. Then execute make
edit Makefile to add CC = g++
with these changes I am able build and run the sample code.
linux-vdso.so.1 (0x00007fff0a3e6000)
libstdc++.so.6 => /usr/lib/x86_64-linux-gnu/libstdc++.so.6 (0x00007f1389440000)
libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00007f138904f000)
libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f1388cb1000)
/lib64/ld-linux-x86-64.so.2 (0x00007f13899cb000)
libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 (0x00007f1388a99000)
and
ELF 64-bit LSB shared object, x86-64, version 1 (SYSV), dynamically linked, interpreter /lib64/ld-linux-x86-64.so.2, for GNU/Linux 3.2.0, BuildID[sha1]=6e3fb6ed5f48b8f66fe4c05118f7b6bf6a9a1235, not stripped
You need to modify the makefile inorder to adapt C++:
You need to change CFLAGS to CPPFLAGS
See below reference example:
ifeq ($(RTE_SDK),)
$(error "Please define RTE_SDK environment variable")
endif
# Default target, can be overriden by command line or environment
RTE_TARGET ?= x86_64-native-linuxapp-gcc
include $(RTE_SDK)/mk/rte.vars.mk
# binary name
APP = dpdkrecv
# all source are stored in SRCS-y
SRCS-y := main.c syncshm.c cqf.cpp countingquotientfilter.cpp murmurhash3.cpp
CPPFLAGS += -O3 -mbmi2
CFLAGS += $(WERROR_FLAGS)
include $(RTE_SDK)/mk/rte.extapp.mk
Please share the Makefile,
I am adding
#include algorithm
dpdk ver: dpdk-stable-18.11.2 ,
build with
sudo make install T=x86_64-native-linuxapp-gcc DESTDIR=install

Why two targets linking differently using cmake?

I have this target that compiles ok.
#
file(GLOB SOURCE_FILES
8021QBG/*.h
8021QBG/*.cpp
)
add_library(8021qbg SHARED
${SOURCE_FILES}
)
set_target_properties(8021qbg PROPERTIES LINKER_LANGUAGE CXX)
set(CMAKE_CXX_FLAGS_CUSTOM " ")
set_target_properties(8021qbg PROPERTIES COMPILE_FLAGS " ${CMAKE_CXX_FLAGS_CUSTOM} ${CMAKE_CXX_FLAGS_COMMON}")
add_dependencies(8021qbg core )
target_link_libraries(8021qbg -L${PROJECT_BINARY_DIR})
target_link_libraries(8021qbg -L/home/user/protocol_so )
target_link_libraries(8021qbg -L${PROJECT_SOURCE_DIR}/lib64 )
target_link_libraries(8021qbg -L${PROJECT_SOURCE_DIR})
target_link_libraries(8021qbg protocol_common thread vip core m xml2)
target_include_directories(8021qbg PUBLIC
8021QBG
nte-encap
)
and this that fails.
#
file(GLOB SOURCE_FILES
Agent/*.h
Agent/*.cpp
)
add_library(agent SHARED
${SOURCE_FILES}
)
set_target_properties(agent PROPERTIES LINKER_LANGUAGE CXX)
set(CMAKE_CXX_FLAGS_CUSTOM " ")
set_target_properties(agent PROPERTIES COMPILE_FLAGS " ${CMAKE_CXX_FLAGS_CUSTOM} ${CMAKE_CXX_FLAGS_COMMON}")
add_dependencies(agent core)
target_link_libraries(agent -L${PROJECT_BINARY_DIR})
target_link_libraries(agent -L/home/user/protocol_so )
target_link_libraries(agent -L${PROJECT_SOURCE_DIR}/lib64 )
target_link_libraries(agent -L${PROJECT_SOURCE_DIR})
target_link_libraries(agent protocol_common thread vip core xml2 pthread)
target_include_directories(agent PUBLIC
Agent
nte-encap
)
Also these targets have the same flags:
set (CMAKE_CXX_FLAGS_COMMON "-g -fpermissive -std=gnu89 -Wall -O0 -m64 -fPIC -DLINUX -DCPU_64 -DXSTREAM ")
set (CMAKE_SHARED_LINKER_FLAGS "-Wl,--unresolved-symbols=ignore-in-shared-libs -shared -Wl,-rpath,/home/user/protocol_so:/home/user/cmake_libs/lib64:libwifi")
if(NOT CMAKE_CXX_CREATE_SHARED_LIBRARY)
set(CMAKE_CXX_CREATE_SHARED_LIBRARY
"<CMAKE_CXX_COMPILER> <CMAKE_SHARED_LIBRARY_CXX_FLAGS> <LANGUAGE_COMPILE_FLAGS> <LINK_FLAGS> <CMAKE_SHARED_LIBRARY_CREATE_CXX_FLAGS> <SONAME_FLAG><TARGET_SONAME> -o <TARGET> <OBJECTS> <LINK_LIBRARIES>")
endif()
This is linker stage
/usr/bin/g++ -fPIC -g -Wl,--unresolved-symbols=ignore-in-shared-libs -shared -Wl,-rpath,/home/user/protocol_so:/home/user/cmake_libs/lib64:libwifi -shared -Wl,-soname,libagent.so -o libagent.so CMakeFiles/agent.dir/Agent/agent_common.cpp.o CMakeFiles/agent.dir/Agent/agent_main.cpp.o CMakeFiles/agent.dir/Agent/agent_client.cpp.o CMakeFiles/agent.dir/Agent/agent_cmd.cpp.o CMakeFiles/agent.dir/Agent/agent_go.cpp.o -L/home/user/cmake_libs/cmake-build-debug-rurem -L/home/user/protocol_so -L/home/user/cmake_libs/lib64 -L/home/user/cmake_libs -lprotocol_common -lthread -lvip libcore.so -lxml2 -lpthread -L/home/user/cmake_libs/lib64 -lprotocol_common -lthread -lvip -lcrypto -lglib-2.0 -lm -lxml2 -lpthread -Wl,-rpath,/home/user/cmake_libs/cmake-build-debug-rurem
This is error codes
/home/user/cmake_libs/Agent/agent_main.cpp:47: undefined reference to `agent_client_register'
/home/user/cmake_libs/Agent/agent_main.cpp:48: undefined reference to `agent_client_unregister'
/home/user/cmake_libs/Agent/agent_main.cpp:49: undefined reference to `agent_client_register_task'
/home/user/cmake_libs/Agent/agent_main.cpp:50: undefined reference to `agent_client_unregister_task'
Cmake compiles each *.cpp file to *.o object and than linker combine them in one *.so lib -> in the linker stage I got this error.
Sources located in "Agent" folder and I add it to the target 'agent'.
UDP>
simple makefile and GCC build this library.
makefile part:
libagent.so: ${wildcard Agent/*.[c,h]} libcore.so
$(CC) $(CFLAGS) -fPIC -shared -o $# $(filter %.c,$^) $(IPATH) $(RPATH) $(TE_VIP) -lcore -lxml2 -lpthread
gcc command
gcc -g -Wall -O0 -m64 -Wl,--unresolved-symbols=ignore-in-shared-libs -fPIC -shared -o libagent.so -Inte-include -Ixst_inc -Ixst_tls -L./lib64 -L./cmake-build-debug-rurem -Wl,-rpath,/home/user/protocol_so:/home/user/lib64:libwifi -DLINUX -DCPU_64 -DXSTREAM -lprotocol_common -lthread -lvip -lcore -lxml2 -lpthread
UDP#2.
on arm machine with gcc v9.1.0 it builds successfully via makefile.
on x86 machine with gcc v4.3.4 I have such undefined referencies.
this is compiling command
g++ -g -Wall -O0 -m64 -Wl,--unresolved-symbols=ignore-in-shared-libs -fPIC -shared -o 0libagent.so -Inte-include -Iinc -Itls -L/home/user/cmake_libs/lib64 -L/home/user/cmake_libs -Wl,-rpath,/home/user/protocol_so:/home/user/cmake_libs/lib64:libwifi -DLINUX -DCPU_64 -DXSTREAM -lprotocol_common -lthread -lvip -lcore -lxml2 -lpthread Agent/agent_main.cpp Agent/agent_cmd.cpp Agent/agent_client.cpp Agent/agent_go.cpp Agent/agent_common.cpp
This is piece of agent_main.cpp that causes errors:
This is function that defined in agent_client.cpp that causes undefined reference
UPD#3
nm says that definitions are in objects.
> nm CMakeFiles/agent.dir/Agent/agent_client.cpp.o
...
00000000000007e2 T _Z21agent_client_registeriP20_protocol_callback_t
0000000000000000 T _Z21agent_client_run_taskiPv
0000000000000033 T _Z22agent_client_do_actionPviS_S_
...
x86 machine - SUSE 11 sp3 x64
Why it fails?
How to fix it?
The main point was not in cmake, and even not in make commands. I think this is about gcc versions support. On x86 I have gcc v4.3.4.
As #AlexCohn said in the comments
I would try to declare agent_client_register() and the rest of them as
extern "C" in agent_client.h and make sure this header is included in
both agent_client.cpp and agent_main.cpp

Problems linking Bonmin using Cmake under macOS High Sierra with "ld: framework not found -lAccelerate"

I am currently trying to link Bonmin using cmake in my project under macOS High Sierra (10.13.4) with Xcode version 9.3. Before I describe the setup I should mention that the Bonmin example (/PATH_TO_BONMIN/Bonmin/examples/CppExample) compiles with the included make files. Later example I try to get to work in my environment, but it is not working. Thus, I think there must be an incompatibility.
Bonmin 1.8 (https://www.coin-or.org/Tarballs/Bonmin/) was build on my Mac using
../configure -C --disable-shared F77="/usr/local/bin/gfortran" FFLAGS="-fexceptions -m64 -fbackslash" CFLAGS="-fno-common -no-cpp-precomp -fexceptions -arch x86_64 -m64" CXXFLAGS="-fno-common -no-cpp-precomp -fexceptions -arch x86_64 -m64"
My FindBonmin.cmake uses the package configuration files from "${BONMIN_LIBRARY_DIR}/pkgconfig":
find_path(BONMIN_LIBRARY_DIR
NAMES libbonmin.a
HINTS ...
HINTS /usr/local/include/coin
HINTS ${BONMIN_ROOT_DIR}/include/coin
HINTS ${BONMIN_ROOT_DIR}/include
)
if(IS_DIRECTORY "${BONMIN_LIBRARY_DIR}/pkgconfig")
set(CMAKE_PREFIX_PATH "${BONMIN_LIBRARY_DIR}/pkgconfig")
set(ENV{PKG_CONFIG_PATH} "${BONMIN_LIBRARY_DIR}/pkgconfig")
else()
message("Directory ${BONMIN_LIBRARY_DIR}/pkgconfig does not exist!")
endif()
From this I get the following:
${BONMIN_LIBRARY_DIR}/pkgconfig =
/Users/<PATH>/Bonmin-1.8/build/lib/pkgconfig
${PKG_BONMIN_INCLUDE_DIRS} =
/Users/<PATH>/Bonmin-1.8/build/include/coin;/Users/<PATH>/Bonmin-1.8/build/include/coin/ThirdParty;/Users/<PATH>/Bonmin-1.8/build/include/coin;/Users/<PATH>/Bonmin-1.8/build/include/coin/ThirdParty
${PKG_BONMIN_LDFLAGS} = -L/Users/<PATH>/Bonmin-1.8/build/lib;-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64;-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../../x86_64;-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3;-L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../..;-lbonmin;-lCbcSolver;-lCbc;-lCgl;-lOsiClp;-lClpSolver;-lClp;-lcoinasl;-lm;-ldl;-lOsi;-lCoinUtils;-lbz2;-lz;-framework;Accelerate;-lm;-lipopt;-framework;Accelerate;-lm;-ldl;-lcoinmumps;-framework;Accelerate;-lgfortranbegin;-lgfortran;-lSystem
This is used for the example:
include_directories(${PKG_BONMIN_INCLUDE_DIRS} )
add_executable(bonminExample runnables/bonminExample.cpp)
target_link_libraries(bonminExample ${PKG_BONMIN_LDFLAGS})
Additional information:
cmake_minimum_required(VERSION 3.6)
project(MyProject CXX)
# The version number.
set (MyProject_VERSION_MAJOR 1)
set (MyProject_VERSION_MINOR 0)
set(CMAKE_C_COMPILER "/usr/local/Cellar/llvm/5.0.1/bin/clang" CACHE FILEPATH "Path to the used C compiler; default clang." FORCE)
set(CMAKE_CXX_COMPILER "/usr/local/Cellar/llvm/5.0.1/bin/clang++" CACHE FILEPATH "Path to the used C++ compiler; default clang++." FORCE)
set(OPENMP_LIBRARIES "/usr/local/Cellar/llvm/5.0.1/lib" CACHE FILEPATH "Path to the OpenMP libraries." FORCE)
set(OPENMP_INCLUDES "/usr/local/Cellar/llvm/5.0.1/include" CACHE FILEPATH "Path to the OpenMP includes." FORCE)
## Set c++14
set(CMAKE_CXX_STANDARD 14)
if(CMAKE_CXX_COMPILER_ID MATCHES "GNU|Clang")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -march=native")
endif()
...
The error message I get, while trying to link Bonmin is:
ld: framework not found -lAccelerate
clang-5.0: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [/Users/<PATH>/myproject/bin/bonminExample] Error 1
make[1]: *** [src/CMakeFiles/bonminExample.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
With the details:
[ 3%] Linking CXX executable /Users/<PATH>/myproject/bin/bonminExample
cd /Users/<PATH>/build_debug/src && /opt/local/bin/cmake -E cmake_link_script CMakeFiles/bonminExample.dir/link.txt --verbose=1
cd /Users/<PATH>/build_debug && /opt/local/bin/cmake -E cmake_depends "Unix Makefiles" /Users/<PATH>/myproject /Users/<PATH>/build_debug/googletest-src/googlemock /Users/<PATH>/build_debug /Users/<PATH>/build_debug/googletest-build/googlemock /Users/<PATH>/build_debug/googletest-build/googlemock/CMakeFiles/gmock_autogen.dir/DependInfo.cmake --color=
cd /Users/<PATH>/build_debug && /opt/local/bin/cmake -E cmake_depends "Unix Makefiles" /Users/<PATH>/myproject/ /Users/<PATH>/myproject/src /Users/<PATH>/build_debug /Users/<PATH>/build_debug/src /Users/<PATH>/build_debug/src/CMakeFiles/PGT.dir/DependInfo.cmake --color=
/usr/local/Cellar/llvm/5.0.1/bin/clang++ -fopenmp=libomp -Wno-unused-command-line-argument -DCOIN_USE_MUMPS_MPI_H -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -m64 -DBONMIN_BUILD -march=native -g -Wall -ggdb -Wl,-search_paths_first -Wl,-headerpad_max_install_names CMakeFiles/bonminExample.dir/runnables/BonminExample.cpp.o CMakeFiles/bonminExample.dir/bonminExample_autogen/mocs_compilation.cpp.o -o /Users/<PATH>/myproject/bin/bonminExample -L/usr/local/Cellar/llvm/5.0.1/lib -L/Users/<PATH>/external_libraries/ogdf20170723 -Wl,-rpath,/usr/local/Cellar/llvm/5.0.1/lib -Wl,-rpath,/Users/<PATH>/external_libraries/ogdf20170723 -L/Users/<PATH>/external_libraries/Bonming-1.8/build/lib -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../../x86_64 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3 -L/usr/local/lib/gcc/i686-apple-darwin8/4.2.3/../../.. -lbonmin -lCbcSolver -lCbc -lCgl -lOsiClp -lClpSolver -lClp -lcoinasl -lm -ldl -lOsi -lCoinUtils -lbz2 -lz -framework -lAccelerate -lm -lipopt -framework -lAccelerate -lm -ldl -lcoinmumps -framework -lAccelerate -lgfortranbegin -lgfortran -lSystem -lm -ldl -lOsi -lCoinUtils -lbz2 -lz -lipopt -lcoinmumps -lgfortranbegin -lgfortran -lSystem
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f googletest-build/googlemock/CMakeFiles/gmock_autogen.dir/build.make googletest-build/googlemock/CMakeFiles/gmock_autogen.dir/build
[ 4%] Automatic MOC for target gmock
cd /Users/<PATH>/build_debug/googletest-build/googlemock && /opt/local/bin/cmake -E cmake_autogen /Users/<PATH>/build_debug/googletest-build/googlemock/CMakeFiles/gmock_autogen.dir Debug
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f src/CMakeFiles/PGT.dir/build.make src/CMakeFiles/PGT.dir/build
ld: framework not found -lAccelerate
clang-5.0: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [/Users/<PATH>/myproject/bin/bonminExample] Error 1
make[1]: *** [src/CMakeFiles/bonminExample.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
/Applications/Xcode.app/Contents/Developer/usr/bin/make -f src/CMakeFiles/PGTIP.dir/build.make src/CMakeFiles/PGTIP.dir/build
Does anybody know what might be an issue or even has a solution to it?
Note that the make file from the Bonmin example gives me the following:
MBP:CppExample myname$ make VERBOSE=1
clang++ -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -m64 -DBONMIN_BUILD `PKG_CONFIG_PATH=/Users/<PATH>/Bonmin-1.8/build/lib64/pkgconfig:/Users/<PATH>/Bonmin-1.8/build/lib/pkgconfig:/Users/<PATH>/Bonmin-1.8/build/share/pkgconfig:/opt/X11/lib/pkgconfig pkg-config --cflags bonmin` -c -o MyBonmin.o `test -f '../../../../Bonmin/examples/CppExample/MyBonmin.cpp' || echo '../../../../Bonmin/examples/CppExample/'`../../../../Bonmin/examples/CppExample/MyBonmin.cpp
clang++ -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -m64 -DBONMIN_BUILD `PKG_CONFIG_PATH=/Users/<PATH>/Bonmin-1.8/build/lib64/pkgconfig:/Users/<PATH>/Bonmin-1.8/build/lib/pkgconfig:/Users/<PATH>/Bonmin-1.8/build/share/pkgconfig:/opt/X11/lib/pkgconfig pkg-config --cflags bonmin` -c -o MyTMINLP.o `test -f '../../../../Bonmin/examples/CppExample/MyTMINLP.cpp' || echo '../../../../Bonmin/examples/CppExample/'`../../../../Bonmin/examples/CppExample/MyTMINLP.cpp
bla=;\
for file in MyBonmin.o MyTMINLP.o; do bla="$bla `echo $file`"; done; \
clang++ -fno-common -no-cpp-precomp -fexceptions -arch x86_64 -m64 -DBONMIN_BUILD -o CppExample $bla `PKG_CONFIG_PATH=/Users/<PATH>/Bonmin-1.8/build/lib64/pkgconfig:/Users/<PATH>/Bonmin-1.8/build/lib/pkgconfig:/Users/<PATH>/Bonmin-1.8/build/share/pkgconfig:/opt/X11/lib/pkgconfig pkg-config --libs bonmin`
Before XXX_LDFLAGS variable, obtained from PkgConfig module, is used in target_link_libraries call, modify that variable:
string(REPLACE "-framework;" "-framework " PKG_BONMIN_LDFLAGS "${PKG_BONMIN_LDFLAGS}")
(The quotation marks at "${PKG_BONMIN_LDFLAGS}" are important.)
After that, -framework option will be processed correctly:
target_link_libraries(... ${PKG_BONMIN_LDFLAGS})
Explanations
It seems that CMake incorrectly works with pkg-config when framework is used. When extract
-framework Acceletate
from the pkg-config output, these 2 words are interpreted as separate arguments. So, when passed to target_link_libraries:
target_link_libraries(... -framework Acceletate)
-l is appended to the second word according to the command's rules:
ld .... -framework -lAccelerate
Proper command's call should be
target_link_libraries(... "-framework Acceletate")
And this is exactly the purpose of above-mentioned string(REPLACE): It replaces CMake arguments delimiter ;, following -framework option, with normal space .

Adding json library to clang libtooling project

I am writing a RecursiveASTVisitor using clang libtool.
Right now I'm trying to read in a json file and have downloaded the json library from https://github.com/open-source-parsers/jsoncpp
I have copied over the folder "include/json" to my project path "llvm/tools/clang/include"
When compiling using the ninja command, the include command isn't throwing any error include "json/json.h"
However, when I try entering a line of code Json::Value root, it throws a linking error..
Full error log:
ninja -v
[1/1] : && /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++ -fPIC -fvisibility-inlines-hidden -Wall -W -Wno-unused-parameter -Wwrite-strings -Wcast-qual -Wmissing-field-initializers -pedantic -Wno-long-long -Wcovered-switch-default -Wnon-virtual-dtor -Wdelete-non-virtual-dtor -Werror=date-time -std=c++11 -fcolor-diagnostics -fno-common -Woverloaded-virtual -Wno-nested-anon-types -g -Wl,-search_paths_first -Wl,-headerpad_max_install_names tools/clang/tools/extra/myASTChecker/CMakeFiles/MyASTChecker.dir/MyASTChecker.cpp.o -o bin/MyASTChecker lib/libLLVMSupport.a lib/libclangTooling.a lib/libclangASTMatchers.a lib/libclangFormat.a lib/libclangFrontend.a lib/libclangDriver.a lib/libLLVMOption.a lib/libclangParse.a lib/libLLVMMCParser.a lib/libclangSerialization.a lib/libclangSema.a lib/libclangEdit.a lib/libclangAnalysis.a lib/libLLVMBitReader.a lib/libLLVMProfileData.a lib/libclangToolingCore.a lib/libclangAST.a lib/libclangRewrite.a lib/libclangLex.a lib/libclangBasic.a lib/libLLVMCore.a lib/libLLVMMC.a lib/libLLVMSupport.a -lcurses -lpthread -lz -lm -Wl,-rpath,#executable_path/../lib && :
FAILED: bin/MyASTChecker
: && /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang++ -fPIC -fvisibility-inlines-hidden -Wall -W -Wno-unused-parameter -Wwrite-strings -Wcast-qual -Wmissing-field-initializers -pedantic -Wno-long-long -Wcovered-switch-default -Wnon-virtual-dtor -Wdelete-non-virtual-dtor -Werror=date-time -std=c++11 -fcolor-diagnostics -fno-common -Woverloaded-virtual -Wno-nested-anon-types -g -Wl,-search_paths_first -Wl,-headerpad_max_install_names tools/clang/tools/extra/myASTChecker/CMakeFiles/MyASTChecker.dir/MyASTChecker.cpp.o -o bin/MyASTChecker lib/libLLVMSupport.a lib/libclangTooling.a lib/libclangASTMatchers.a lib/libclangFormat.a lib/libclangFrontend.a lib/libclangDriver.a lib/libLLVMOption.a lib/libclangParse.a lib/libLLVMMCParser.a lib/libclangSerialization.a lib/libclangSema.a lib/libclangEdit.a lib/libclangAnalysis.a lib/libLLVMBitReader.a lib/libLLVMProfileData.a lib/libclangToolingCore.a lib/libclangAST.a lib/libclangRewrite.a lib/libclangLex.a lib/libclangBasic.a lib/libLLVMCore.a lib/libLLVMMC.a lib/libLLVMSupport.a -lcurses -lpthread -lz -lm -Wl,-rpath,#executable_path/../lib && :
Undefined symbols for architecture x86_64:
"Json::Value::Value(Json::ValueType)", referenced from:
MyASTFrontendAction::CreateASTConsumer(clang::CompilerInstance&, llvm::StringRef) in MyASTChecker.cpp.o
"Json::Value::~Value()", referenced from:
MyASTFrontendAction::CreateASTConsumer(clang::CompilerInstance&, llvm::StringRef) in MyASTChecker.cpp.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
ninja: build stopped: subcommand failed.
What am I missing or should be doing instead??
When compiling using the ninja command, the include command isn't throwing any error include "json/json.h"
When you copy paste the header files into a folder that's already in the compiler's include search path. You won't get issues in #include "json/json.h" because yeah the file is there and you haven't used anything from it yet so it's just some function, class declarations which will be ignored.
However, when I try entering a line of code Json::Value root, it throws a linking error.
Now, when wrote Json::Value root; what happened was that you called the constructor for Json::Value which is declared in the included header files, but is implemented in the source files. Hence, the compiler is not able to find that implementation of the constructor and is complaining about it.
It might have worked the whole Json parser library was implemented in the included header files. As then the compiler would have found the declaration with the definition.
What you really want to do is have the include files in the compiler's include search directory and then a compiled library file of json parser, which you link to your ASTVisitor.
Resolution:
First of all, I will discourage copy pasting json parsers include files into clang's include directory. Instead, you can do two things here:
Paste your include files in a general include directory like /usr/local/include
Add your include directory to CPLUS_INCLUDE_PATH.
Once you have that include files setup done, you will want to have the json parser from github compiled and then link your recursiveASTVisitor to it.
Answer
I see that jsonparser you linked has a cmakelist file which is really helpful if you just want to let it do the job.
once you clone the repo, do as they say to compile their library.
mkdir -p build/debug
cd build/debug
cmake -DCMAKE_BUILD_TYPE=debug -DBUILD_STATIC_LIBS=ON -DBUILD_SHARED_LIBS=OFF -DARCHIVE_INSTALL_DIR=. -G "Unix Makefiles" ../..
make
After this you can call sudo make install this will copy the include files in a proper include directory which is indexed for search by your OS and also do the same for the compiled library. After this linking to your library is as simple as
CFLAGS = `pkg-config --cflags opencv`
LIBS = `pkg-config --libs opencv`
% : %.cpp
g++ $(CFLAGS) $(LIBS) -o $# $<
if you using MAKEFILE to compile your ASTVisitor (make ASTvisitor.cpp). OR
target_link_library(target jsoncpp)
if you are using a CMAKELIST to compile your ASTVisitor

clang: error: linker command failed with exit code 1 (use -v to see invocation) - Qt Creator 3.3

Alright, I know that there are other posts on this error, but I can't seem to find one that fixes my problem. The issue is that when I try to build my C++ project in Qt Creator I get two errors: 1) symbol(s) not found for architecture x86_64 and 2) linker command failed with exit code 1 (use -v to see invocation). The code builds and runs fine until I try to implement the FFT using the FFTW-3.3.4 library. The complete compiler output is:
14:55:10: Running steps for project RFdata...
14:55:10: Configuration unchanged, skipping qmake step.
14:55:10: Starting: "/usr/bin/make"
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr /bin/clang++ -c -pipe -g -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDK s/MacOSX10.9.sdk -mmacosx-version-min=10.7 -Wall -W -fPIE -DQT_CORE_LIB - I../Qt/5.4/clang_64/mkspecs/macx-clang -I../RFdata -I../RFdata/fftw- 3.3.4/libbench2 -I../Qt/5.4/clang_64/lib/QtCore.framework/Versions/5/Headers -I. - I. -F/Users/Mike/Desktop/Qt/5.4/clang_64/lib -o main.o ../RFdata/main.cpp
../RFdata/main.cpp:93:22: warning: comparison of integers of different signs: 'long' and 'size_type' (aka 'unsigned long') [-Wsign-compare]
for (long i = 0; i < str.length(); ++i) //M:for loop that iterates through the length of the string and //replaces each occurance of a ch1 with ch2
~ ^ ~~~~~~~~~~~~
1 warning generated.
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr /bin/clang++ -c -pipe -g -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDK s/MacOSX10.9.sdk -mmacosx-version-min=10.7 -Wall -W -fPIE -DQT_CORE_LIB - I../Qt/5.4/clang_64/mkspecs/macx-clang -I../RFdata -I../RFdata/fftw- 3.3.4/libbench2 -I../Qt/5.4/clang_64/lib/QtCore.framework/Versions/5/Headers -I. - I. -F/Users/Mike/Desktop/Qt/5.4/clang_64/lib -o display_vector.o ../RFdata/display_vector.cpp
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr /bin/clang++ -c -pipe -g -isysroot /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDK s/MacOSX10.9.sdk -mmacosx-version-min=10.7 -Wall -W -fPIE -DQT_CORE_LIB - I../Qt/5.4/clang_64/mkspecs/macx-clang -I../RFdata -I../RFdata/fftw- 3.3.4/libbench2 -I../Qt/5.4/clang_64/lib/QtCore.framework/Versions/5/Headers -I. - I. -F/Users/Mike/Desktop/Qt/5.4/clang_64/lib -o convert_string.o ../RFdata/convert_string.cpp
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr /bin/clang++ -headerpad_max_install_names -Wl,- syslibroot,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/De veloper/SDKs/MacOSX10.9.sdk -mmacosx-version-min=10.7 -Wl,- rpath,/Users/Mike/Desktop/Qt/5.4/clang_64/lib -o RFdata main.o display_vector.o convert_string.o -F/Users/Mike/Desktop/Qt/5.4/clang_64/lib - L/Users/Mike/Desktop/RFdata/fftw-3.3.4/libbench2/ -lbench2 -framework QtCore - framework DiskArbitration -framework IOKit
Undefined symbols for architecture x86_64:
"_fftw_cleanup", referenced from:
hilbert() in main.o
"_fftw_destroy_plan", referenced from:
hilbert() in main.o
"_fftw_execute", referenced from:
hilbert() in main.o
"_fftw_plan_dft_1d", referenced from:
hilbert() in main.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [RFdata] Error 1
14:55:11: The process "/usr/bin/make" exited with code 2.
Error while building/deploying project RFdata (kit: Desktop Qt 5.4.0 clang 64bit)
When executing step "Make"
14:55:11: Elapsed time: 00:01.
I have absolutely no experience with linking libraries so any help would be absolutely amazing! I should probably show what my .pro file says since from what I can understand, adding the correct lines in the .pro file can be the difference between successfully linking to a library and not being as successful!
.pro:
QT += core
QT -= gui
TARGET = RFdata
CONFIG += console
CONFIG -= app_bundle
TEMPLATE = app
SOURCES += main.cpp \
display_vector.cpp \
convert_string.cpp
HEADERS += \
display_vector.h \
convert_string.h
macx: LIBS += -L$$PWD/fftw-3.3.4/libbench2/ -lbench2
INCLUDEPATH += $$PWD/fftw-3.3.4/libbench2
DEPENDPATH += $$PWD/fftw-3.3.4/libbench2
macx: PRE_TARGETDEPS += $$PWD/fftw-3.3.4/libbench2/libbench2.a
So, I guess the overarching question, though I realize it is a very general and possibly simple one, is how do I go about successfully linking the fftw-3.3.4 library to my c++ project in Qt creator 3.3 on my mac (OSX 10.9.5)????? This has been driving me insane!
It looks like you are trying to link a 32bit library into a 64bit executable. Either look for a 64bit library or compile it as a 32bit program.