I am installing software on a server with no root privileges. I come across the following error during installation:
make[1]: *** [hgaprec] Error 1
make[1]: Leaving directory `/seq/.../SOFTWARE/hgaprec/src'
make: *** [all-recursive] Error 1
Making install in src
make[1]: Entering directory `/seq/.../SOFTWARE/hgaprec/src'
g++ -O3 -o hgaprec ratings.o main.o log.o hgaprec.o -larpack -llapack -
lblas -lgsl -lpthread -lgslcblas
/.../software/free/Linux/redhat_6_x86_64/pkgs/gcc_5.2.0/bin/ld: cannot
find -larpack
collect2: error: ld returned 1 exit status
make[1]: *** [hgaprec] Error 1
make[1]: Leaving directory `/seq/.../SOFTWARE/hgaprec/src'
make: *** [install-recursive] Error 1
Since library arpack could not be found, I then installed it here /seq/.../SOFTWARE/hgaprec/ARPACK and found that the process generated a static file libarpack_LINUX.a. To link this static library to gcc the following command was used:
gcc -larpack -L/seq/.../SOFTWARE/hgaprec/ARPACK/libarpack_LINUX.a
However, I keep getting the same error while installation of the software that larpack was not found. Am I using the linking command wrong?
You either want gcc main.c /seq/../SOFTWARE/hgaprec/ARPACK/libarpack_LINUX.a (you don't need -l and -L if you're specifying the full path to static library), or as #Julian_Cienfuegos suggested gcc main.c -L/seq/../SOFTWARE/hgaprec/ARPACK/ -larpack_LINUX. This assumes you're only compiling a single file called main.c which contains your main() function, and outputs the a.out binary.
EDIT: Added explanation of main.c.
My issue got solved after including the ARPACK library path as part of LD flag in configure like so:
./configure --prefix=/seq/.../SOFTWARE/hgaprec LDFLAGS="-L/seq/.../SOFTWARE/hgaprec/ARPACK/"
Related
I want to use the curl lib in my project (c++ QT creator on windows), I download the zip lib file from the website https://curl.se/download.html (Version 7.82.0)
and I wanted to build it using the Makefile with this commend
mingw32-make mingw32 as described in the documentation https://curl.se/docs/install.html
but unfortunately, I am getting an error
mingw32-make mingw32
[....]
gcc -s -m32 -static -o curl.exe curl.res slist_wc.o tool_binmode.o tool_bname.o
tool_cb_dbg.o tool_cb_hdr.o tool_cb_prg.o tool_cb_rea.o tool_cb_see.o tool_cb_wrt.o
tool_cfgable.o tool_dirhie.o tool_doswin.o tool_easysrc.o tool_filetime.o tool_findfile.o
tool_formparse.o tool_getparam.o tool_getpass.o tool_help.o tool_helpers.o tool_hugehelp.o
tool_libinfo.o tool_listhelp.o tool_main.o tool_msgs.o tool_operate.o tool_operhlp.o
tool_panykey.o tool_paramhlp.o tool_parsecfg.o tool_progress.o tool_strdup.o tool_setopt.o
tool_sleep.o tool_urlglob.o tool_util.o tool_vms.o tool_writeout.o tool_writeout_json.o
tool_xattr.o strtoofft.o nonblock.o warnless.o curl_ctype.o curl_multibyte.o version_win32.o
dynbuf.o -L../lib -lcurl -lwldap32 -lws2_32
../lib\libcurl.a: error adding symbols: Archive has no index; run ranlib to add one
collect2.exe: error: ld returned 1 exit status
make[1]: *** [curl.exe] Fehler 1
make[1]: Leaving directory `D:/Dev/API/curl-7.82.0/src'
make: *** [mingw32] Fehler 2
I tried to run ranlib lib\libcurl.a but the issue is still there,
does anyone have an idea about it?
One more question: is it possible also to build it with mingw64?
I'm writting a extension for pyton3.6. My develop machine run gcc7.3, and production environment os is centos6. I use the following link option to static link glibc to avoid upgrade glibc2.12 to glibc2.14+.
-Wl,-Bdynamic -lpython3.6m -Wl,-Bstatic -lboost_python36
But get error:
[ 50%] Linking CXX shared module helloext.so
/usr/bin/x86_64-linux-gnu-ld: cannot find -lgcc_s
/usr/bin/x86_64-linux-gnu-ld: cannot find -lgcc_s
collect2: error: ld returned 1 exit status
CMakeFiles/helloext.dir/build.make:94: recipe for target 'helloext.so' failed
make[2]: *** [helloext.so] Error 1
CMakeFiles/Makefile2:67: recipe for target 'CMakeFiles/helloext.dir/all' failed
make[1]: *** [CMakeFiles/helloext.dir/all] Error 2
Makefile:83: recipe for target 'all' failed
make: *** [all] Error 2
Anyone known? Thanks.
The reason might be although libgcc is present it may not be in the paths known to ldconfig. Check this by doing
/sbin/ldconfig -p | grep libgcc
Does the output show that there is a link to libgcc corresponds to paths that you have listed above?
A work around for you may be to add the link to the relevant library to your compile command e.g.
... -L /usr/lib/gcc/x86_64-linux-gnu/4.6/
Another may be to create a symbolic link to the library yourself.
ln -s /usr/lib/gcc/x86_64-linux-gnu/4.6/libgcc_s.so /usr/lib/gcc/libgcc_s.so
You have not informed us about Linux you are using. Update 4.6 with the proper number in the command above.
Can someone help me, Im having problem in compiling FingerJetFXOSE in Cygwin 32
gcc version 5.4.0 (GCC)
I used the following command:
$ make -f Makefile
make -C src/libFRFXLL
make[1]: Entering directory '/home/src/FingerJetFXOSE-master/src/libFRFXLL'
make -C src/libFRFXLL
make[2]: Entering directory '/home/src/FingerJetFXOSE- master/src/libFRFXLL/src/libFRFXLL'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/home/src/FingerJetFXOSE-master/src/libFRFXLL/src/libFRFXLL'
make[1]: Leaving directory '/home/src/FingerJetFXOSE-master/src/libFRFXLL'
make -C src/libfjfx
make[1]: Entering directory '/home/src/FingerJetFXOSE-master/src/libfjfx'
g++ -O2 -Wl,--strip-all -I../../include -I../libFRFXLL/include -fno- exceptions-fno-rtti -fno-stack-protector -fPIC -shared -nodefaultlibs -Wl,--version-script
I got this error at the end:
../libFRFXLL/lib/libFRFXLL.a(FRFXLLCreateFeatureSetInPlaceFromRaw.o):FRFXLLCreat
eFeatureSetInPlaceFromRaw.cpp:(.text$_ZN14FingerJetFxOSE15FpRecEngineImpl20Featu
reExtractionObjINS0_8Embedded24FeatureExtractionInPlaceEE16CreateFeatureSetIhEEi
PT_jjjjjPPv[__ZN14FingerJetFxOSE15FpRecEngineImpl20FeatureExtractionObjINS0_8Emb
edded24FeatureExtractionInPlaceEE16CreateFeatureSetIhEEiPT_jjjjjPPv]+0x159c): un
defined reference to `memmove'
collect2: error: ld returned 1 exit status
make[1]: *** [Makefile:62: ../../lib/libfjfx.so.5.2.0] Error 1
make[1]: Leaving directory '/home/usr/FingerJetFXOSE-master/src/libfjfx'
make: *** [Makefile:50: src/libfjfx] Error 2
Thanks
I looked at the makefiles for the FingerJetFXOSE project here:
https://github.com/FingerJetFXOSE/FingerJetFXOSE
The makefiles do not support Cygwin. The README says that Windows is supported, but I suspect they mean a Visual-Studio-based build after a manual source import.
I think you either have to compile on GNU/Linux, or compile this code without the upstream makefiles.
I've recently updated all msys2 packages and now I can't build my project.
The error occurs at the moment of linking one of .dlls - target_library.dll.
The error message isn't clear to me. What does status 5 mean?
collect2.exe: error: ld returned 5 exit status
Full message:
g++ -Wl,-s,--relax,--gc-sections -shared -Wl,-subsystem,windows -mthreads -Wl,--out-implib,C:/msys64/workspace/Project_Root_Directory/project/src/../build/release/plugins/libtarget_library.dll.a -o ../../../../build/release/plugins/target_library.dll object_script.target_library.Release -lglu32 -lopengl32 -luser32 -LC:/msys64/workspace/Project_Root_Directory/project/build/release -LC:/msys64/workspace/Project_Root_Directory/project/third-party/out/lib -LC:/msys64/workspace/Project_Root_Directory/project/deps/lib -lexif -ldecimal -lsqlite3 -lutils -LC:/Python35/libs -lpython35 -lkmlbase -lkmlengine -lkmldom -lkmlxsd -lminizip -luriparser -lkmlconvenience -lcore -lrender -lraster -lgui -LC:/msys64/workspace/Project_Root_Directory/project/deps/lib/target_library/win64 -LC:/msys64/mingw64/lib C:/msys64/mingw64/lib/libQt5Widgets.dll.a C:/msys64/mingw64/lib/libQt5WinExtras.dll.a C:/msys64/mingw64/lib/libQt5Gui.dll.a C:/msys64/mingw64/lib/libQt5Network.dll.a C:/msys64/mingw64/lib/libQt5Concurrent.dll.a C:/msys64/mingw64/lib/libQt5Xml.dll.a C:/msys64/mingw64/lib/libQt5Core.dll.a
collect2.exe: error: ld returned 5 exit status
make[4]: *** [Makefile.Release:159: ../../../../build/release/plugins/target_library.dll] Error 1
make[4]: Leaving directory '/workspace/Project_Root_Directory/project/src/modules/plugins/target_library'
make[3]: Leaving directory '/workspace/Project_Root_Directory/project/src/modules/plugins/target_library'
make[2]: *** [Makefile:384: sub-target_library-make_first] Error 2
make[2]: Leaving directory '/workspace/Project_Root_Directory/project/src/modules/plugins'
make[1]: *** [Makefile:297: sub-plugins-make_first] Error 2
make[1]: Leaving directory '/workspace/Project_Root_Directory/project/src/modules'
make: *** [Makefile:44: sub-modules-make_first] Error 2
gcc 7.1.0, Qt5 5.9.1, qmake, Win7 x64
I had the same issue.
I link my project with static library.
After mingw64 upgrade, my project stoped building with the same error.
I found out that debug version built successfully. So i compared linker flags. In release version Qt add this flags "-Wl,-s,--relax,--gc-section".
I couldn't find any information about "-s" flag, but due to this link i figured out that -gc-section flag was the reason of fail.
I added the following code to my .pro-file, and it worked
mingw {
contains(QT_ARCH, x86_64): {
LIBS+=-Wl,--no-gc-sections
}
}
Just in case someone finds this due the same problem, please, add the following flag to your compiler -Wl,--verbose (or --verbose to the linker). This will show which library was not found or give you more information about the problem.
I am trying to compile some code downloaded from a git repository (OpenNI2, https://github.com/occipital/OpenNI2). I am getting the following errors after running make:
make -C Source/Tools/NiViewer
make[1]: Entering directory `/home/karnivaurus/Data/Libraries/OpenNI2/Source/Tools/NiViewer'
g++ -o ../../../Bin/x64-Release/NiViewer ./../../../Bin/Intermediate/x64-Release/NiViewer/Device.o ./../../../Bin/Intermediate/x64-Release/NiViewer/Draw.o ./../../../Bin/Intermediate/x64-Release/NiViewer/Keyboard.o ./../../../Bin/Intermediate/x64-Release/NiViewer/Menu.o ./../../../Bin/Intermediate/x64-Release/NiViewer/MouseInput.o ./../../../Bin/Intermediate/x64-Release/NiViewer/NiViewer.o ./../../../Bin/Intermediate/x64-Release/NiViewer/Capture.o -L../../../ThirdParty/PSCommon/XnLib/Bin/x64-Release -L../../../Bin/x64-Release -lglut -lGL -lOpenNI2 -lXnLib -Wl,-rpath ./
/usr/bin/ld: ../../../ThirdParty/PSCommon/XnLib/Bin/x64-Release/libXnLib.a(XnLinuxMutex.o): undefined reference to symbol 'pthread_mutexattr_settype##GLIBC_2.2.5'
//lib/x86_64-linux-gnu/libpthread.so.0: error adding symbols: DSO missing from command line
collect2: error: ld returned 1 exit status
make[1]: *** [../../../Bin/x64-Release/NiViewer] Error 1
make[1]: Leaving directory `/home/karnivaurus/Data/Libraries/OpenNI2/Source/Tools/NiViewer'
make: *** [Source/Tools/NiViewer] Error 2
Any ideas on how I should go about solving this?
You have to add the directive "-lpthread" to your compiler and it is solved.
for instance if your previous code was:
g++ mycode.cpp -o myexecutable
Now you have to put
g++ mycode.cpp -lpthread -o myexecutable
You need add the pthread library into the target_link_libraries. You can edit your CMakeLists.txt file as follow. This solution works for me.
target_link_libraries(ExcutableFileName ${Existed_LIBRARY})
-->
target_link_libraries(ExcutableFileName ${Existed_LIBRARY} pthread)