Error in gauss-newton implementation for pose optimization - c++

I’m using a modified version of a gauss-newton method to refine a pose estimate using OpenCV. The unmodified code can be found here: http://people.rennes.inria.fr/Eric.Marchand/pose-estimation/tutorial-pose-gauss-newton-opencv.html
The details of this approach are outlined in the corresponding paper:
Marchand, Eric, Hideaki Uchiyama, and Fabien Spindler. "Pose
estimation for augmented reality: a hands-on survey." IEEE
transactions on visualization and computer graphics 22.12 (2016):
2633-2651.
A PDF can be found here: https://hal.inria.fr/hal-01246370/document
The part that is relevant (Pages 4 and 5) are screencapped below:
Here is what I have done. First, I’ve (hopefully) “corrected” some errors: (a) dt and dR can be passed by reference to exponential_map() (even though cv::Mat is essentially a pointer). (b) The last entry of each 2x6 Jacobian matrix, J.at<double>(i*2+1,5), was -x[i].y but should be -x[i].x. (c) I’ve also tried using a different formula for the projection. Specifically, one that includes the focal length and principal point:
xq.at<double>(i*2,0) = cx + fx * cX.at<double>(0,0) / cX.at<double>(2,0);
xq.at<double>(i*2+1,0) = cy + fy * cX.at<double>(1,0) / cX.at<double>(2,0);
Here is the relevant code I am using, in its entirety (control starts at optimizePose3()):
void exponential_map(const cv::Mat &v, cv::Mat &dt, cv::Mat &dR)
{
double vx = v.at<double>(0,0);
double vy = v.at<double>(1,0);
double vz = v.at<double>(2,0);
double vtux = v.at<double>(3,0);
double vtuy = v.at<double>(4,0);
double vtuz = v.at<double>(5,0);
cv::Mat tu = (cv::Mat_<double>(3,1) << vtux, vtuy, vtuz); // theta u
cv::Rodrigues(tu, dR);
double theta = sqrt(tu.dot(tu));
double sinc = (fabs(theta) < 1.0e-8) ? 1.0 : sin(theta) / theta;
double mcosc = (fabs(theta) < 2.5e-4) ? 0.5 : (1.-cos(theta)) / theta / theta;
double msinc = (fabs(theta) < 2.5e-4) ? (1./6.) : (1.-sin(theta)/theta) / theta / theta;
dt.at<double>(0,0) = vx*(sinc + vtux*vtux*msinc)
+ vy*(vtux*vtuy*msinc - vtuz*mcosc)
+ vz*(vtux*vtuz*msinc + vtuy*mcosc);
dt.at<double>(1,0) = vx*(vtux*vtuy*msinc + vtuz*mcosc)
+ vy*(sinc + vtuy*vtuy*msinc)
+ vz*(vtuy*vtuz*msinc - vtux*mcosc);
dt.at<double>(2,0) = vx*(vtux*vtuz*msinc - vtuy*mcosc)
+ vy*(vtuy*vtuz*msinc + vtux*mcosc)
+ vz*(sinc + vtuz*vtuz*msinc);
}
void optimizePose3(const PoseEstimation &pose,
std::vector<FeatureMatch> &feature_matches,
PoseEstimation &optimized_pose) {
//Set camera parameters
double fx = camera_matrix.at<double>(0, 0); //Focal length
double fy = camera_matrix.at<double>(1, 1);
double cx = camera_matrix.at<double>(0, 2); //Principal point
double cy = camera_matrix.at<double>(1, 2);
auto inlier_matches = getInliers(pose, feature_matches);
std::vector<cv::Point3d> wX;
std::vector<cv::Point2d> x;
const unsigned int npoints = inlier_matches.size();
cv::Mat J(2*npoints, 6, CV_64F);
double lambda = 0.25;
cv::Mat xq(npoints*2, 1, CV_64F);
cv::Mat xn(npoints*2, 1, CV_64F);
double residual=0, residual_prev;
cv::Mat Jp;
for(auto i = 0u; i < npoints; i++) {
//Model points
const cv::Point2d &M = inlier_matches[i].model_point();
wX.emplace_back(M.x, M.y, 0.0);
//Imaged points
const cv::Point2d &I = inlier_matches[i].image_point();
xn.at<double>(i*2,0) = I.x; // x
xn.at<double>(i*2+1,0) = I.y; // y
x.push_back(I);
}
//Initial estimation
cv::Mat cRw = pose.rotation_matrix;
cv::Mat ctw = pose.translation_vector;
int nIters = 0;
// Iterative Gauss-Newton minimization loop
do {
for (auto i = 0u; i < npoints; i++) {
cv::Mat cX = cRw * cv::Mat(wX[i]) + ctw; // Update cX, cY, cZ
// Update x(q)
//xq.at<double>(i*2,0) = cX.at<double>(0,0) / cX.at<double>(2,0); // x(q) = cX/cZ
//xq.at<double>(i*2+1,0) = cX.at<double>(1,0) / cX.at<double>(2,0); // y(q) = cY/cZ
xq.at<double>(i*2,0) = cx + fx * cX.at<double>(0,0) / cX.at<double>(2,0);
xq.at<double>(i*2+1,0) = cy + fy * cX.at<double>(1,0) / cX.at<double>(2,0);
// Update J using equation (11)
J.at<double>(i*2,0) = -1 / cX.at<double>(2,0); // -1/cZ
J.at<double>(i*2,1) = 0;
J.at<double>(i*2,2) = x[i].x / cX.at<double>(2,0); // x/cZ
J.at<double>(i*2,3) = x[i].x * x[i].y; // xy
J.at<double>(i*2,4) = -(1 + x[i].x * x[i].x); // -(1+x^2)
J.at<double>(i*2,5) = x[i].y; // y
J.at<double>(i*2+1,0) = 0;
J.at<double>(i*2+1,1) = -1 / cX.at<double>(2,0); // -1/cZ
J.at<double>(i*2+1,2) = x[i].y / cX.at<double>(2,0); // y/cZ
J.at<double>(i*2+1,3) = 1 + x[i].y * x[i].y; // 1+y^2
J.at<double>(i*2+1,4) = -x[i].x * x[i].y; // -xy
J.at<double>(i*2+1,5) = -x[i].x; // -x
}
cv::Mat e_q = xq - xn; // Equation (7)
cv::Mat Jp = J.inv(cv::DECOMP_SVD); // Compute pseudo inverse of the Jacobian
cv::Mat dq = -lambda * Jp * e_q; // Equation (10)
cv::Mat dctw(3, 1, CV_64F), dcRw(3, 3, CV_64F);
exponential_map(dq, dctw, dcRw);
cRw = dcRw.t() * cRw; // Update the pose
ctw = dcRw.t() * (ctw - dctw);
residual_prev = residual; // Memorize previous residual
residual = e_q.dot(e_q); // Compute the actual residual
std::cout << "residual_prev: " << residual_prev << std::endl;
std::cout << "residual: " << residual << std::endl << std::endl;
nIters++;
} while (fabs(residual - residual_prev) > 0);
//} while (nIters < 30);
optimized_pose.rotation_matrix = cRw;
optimized_pose.translation_vector = ctw;
cv::Rodrigues(optimized_pose.rotation_matrix, optimized_pose.rotation_vector);
}
Even when I use the functions as given, it does not produce the correct results. My initial pose estimate is very close to optimal, but when I try run the program, the method takes a very long time to converge - and when it does, the results are very wrong. I’m not sure what could be wrong and I’m out of ideas. I’m confident my inliers are actually inliers (they were chosen using an M-estimator). I’ve compared the results from exponential map with those from other implementations, and they seem to agree.
So, where is the error in this gauss-newton implementation for pose optimization? I’ve tried to make things as easy as possible for anyone willing to lend a hand. Let me know if there is anymore information I can provide. Any help would be greatly appreciated. Thanks.

Edit: 2019/05/13
There is now solvePnPRefineVVS function in OpenCV.
Also, you should use x and y calculated from the current estimated pose instead.
In the cited paper, they expressed the measurements x in the normalized camera frame (at z=1).
When working with real data, you have:
(u,v): 2D image coordinates (e.g. keypoints, corner locations, etc.)
K: the intrinsic parameters (obtained after calibrating the camera)
D: the distortion coefficients (obtained after calibrating the camera)
To compute the 2D image coordinates in the normalized camera frame, you can use in OpenCV the function cv::undistortPoints() (link to my answer about cv::projectPoints() and cv::undistortPoints()).
When there is no distortion, the computation (also called "reverse perspective transformation") is:
x = (u - cx) / fx
y = (v - cy) / fy

Related

Calibrating the output(output factor) of a smaller source using Geant4/GATE MonteCarlo simulation

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{
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how to implement a c++ function which creates a swirl on an image

imageData = new double*[imageHeight];
for(int i = 0; i < imageHeight; i++) {
imageData[i] = new double[imageWidth];
for(int j = 0; j < imageWidth; j++) {
// compute the distance and angle from the swirl center:
double pixelX = (double)i - swirlCenterX;
double pixelY = (double)j - swirlCenterY;
double pixelDistance = pow(pow(pixelX, 2) + pow(pixelY, 2), 0.5);
double pixelAngle = atan2(pixelX, pixelY);
// double swirlAmount = 1.0 - (pixelDistance/swirlRadius);
// if(swirlAmount > 0.0) {
// double twistAngle = swirlTwists * swirlAmount * PI * 2.0;
double twistAngle = swirlTwists * pixelDistance * PI * 2.0;
// adjust the pixel angle and compute the adjusted pixel co-ordinates:
pixelAngle += twistAngle;
pixelX = cos(pixelAngle) * pixelDistance;
pixelY = sin(pixelAngle) * pixelDistance;
// }
(this)->setPixel(i, j, tempMatrix[(int)(swirlCenterX + pixelX)][(int)(swirlCenterY + pixelY)]);
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}
I am trying to implement a c++ function (code above) based on the following pseudo-code
which is supposed to create a swirl on an image, but I have some continuity problems on the borders.
The function I have for the moment is able to apply the swirl on a disk of a given size and to deform it almost as I whished but its influence doesn't decrease as we get close to the borders. I tried to multiply the angle of rotation by a 1 - (r/R) factor (with r the distance between the current pixel in the function and the center of the swirl, and R the radius of the swirl), but this doesn't give the effect I hoped for.
Moreover, I noticed that at some parts of the border, a thin white line appears (which means that the values of the pixels there is equal to 1) and I can't exactly explain why.
Maybe some of the problems I have are linked to the atan2 C++ standard function.

C++ opencv : rotating image by an arbitrary number (degree)

From my previous post,
OpenCV : algorithm for simple image rotation and reduction
I still could not rotate my image by an arbitrary number but only 90 degree.
I have changed my code since then, right now is
Mat image1 = imread("Balloon.jpg", CV_LOAD_IMAGE_ANYCOLOR);
Mat rotC(image1.cols, image1.rows, image1.type());
#define PI 3.14156
void rotation(Mat image1)
{
int hwidth = image1.rows / 2;
int hheight = image1.cols / 2;
double angle = 45.00 * PI / 180.0;
for (int x = 0;x < image1.rows;x++) {
for (int y = 0; y < image1.cols;y++) {
int xt = x - hwidth;
int yt = y - hheight;
int xs = (int)round((cos(angle) * xt - sin(angle) * yt) + hwidth);
int ys = (int)round((sin(angle) * xt + cos(angle) * yt) + hheight);
rotC.at<Vec3b>(x,y) = image1.at<Vec3b>(xs, ys);
}
}
}
int main()
{
rotation(image1);
imshow("color", rotC);
waitKey(0);
}
An error came out at rotC.at<Vec3b>(x,y) = image1.at<Vec3b>(xs, ys);
is this the only part where my code have error?
I'm trying to link back my result into the new rotation then display it with imshow.
Please let me know what I'll need to do in order to make it rotate with an arbitrary number such as 30 degree, 46 degree etc.
The result of I wanted to get is shown below, the image is rotated via opencv function.
Thank you!

Rotate an image without cropping in OpenCV in C++

I'd like to rotate an image, but I can't obtain the rotated image without cropping
My original image:
Now I use this code:
#include <opencv2/core/core.hpp>
#include <opencv2/highgui/highgui.hpp>
#include <opencv2/imgproc/imgproc.hpp>
// Compile with g++ code.cpp -lopencv_core -lopencv_highgui -lopencv_imgproc
int main()
{
cv::Mat src = cv::imread("im.png", CV_LOAD_IMAGE_UNCHANGED);
cv::Mat dst;
cv::Point2f pc(src.cols/2., src.rows/2.);
cv::Mat r = cv::getRotationMatrix2D(pc, -45, 1.0);
cv::warpAffine(src, dst, r, src.size()); // what size I should use?
cv::imwrite("rotated_im.png", dst);
return 0;
}
And obtain the following image:
But I'd like to obtain this:
My answer is inspired by the following posts / blog entries:
Rotate cv::Mat using cv::warpAffine offsets destination image
http://john.freml.in/opencv-rotation
Main ideas:
Adjusting the rotation matrix by adding a translation to the new image center
Using cv::RotatedRect to rely on existing opencv functionality as much as possible
Code tested with opencv 3.4.1:
#include "opencv2/opencv.hpp"
int main()
{
cv::Mat src = cv::imread("im.png", CV_LOAD_IMAGE_UNCHANGED);
double angle = -45;
// get rotation matrix for rotating the image around its center in pixel coordinates
cv::Point2f center((src.cols-1)/2.0, (src.rows-1)/2.0);
cv::Mat rot = cv::getRotationMatrix2D(center, angle, 1.0);
// determine bounding rectangle, center not relevant
cv::Rect2f bbox = cv::RotatedRect(cv::Point2f(), src.size(), angle).boundingRect2f();
// adjust transformation matrix
rot.at<double>(0,2) += bbox.width/2.0 - src.cols/2.0;
rot.at<double>(1,2) += bbox.height/2.0 - src.rows/2.0;
cv::Mat dst;
cv::warpAffine(src, dst, rot, bbox.size());
cv::imwrite("rotated_im.png", dst);
return 0;
}
Just try the code below, the idea is simple:
You need to create a blank image with the maximum size you're expecting while rotating at any angle. Here you should use Pythagoras as mentioned in the above comments.
Now copy the source image to the newly created image and pass it to warpAffine. Here you should use the centre of newly created image for rotation.
After warpAffine if you need to crop exact image for this translate four corners of source image in enlarged image using rotation matrix as described here
Find minimum x and minimum y for top corner, and maximum x and maximum y for bottom corner from the above result to crop image.
This is the code:
int theta = 0;
Mat src,frame, frameRotated;
src = imread("rotate.png",1);
cout<<endl<<endl<<"Press '+' to rotate anti-clockwise and '-' for clockwise 's' to save" <<endl<<endl;
int diagonal = (int)sqrt(src.cols*src.cols+src.rows*src.rows);
int newWidth = diagonal;
int newHeight =diagonal;
int offsetX = (newWidth - src.cols) / 2;
int offsetY = (newHeight - src.rows) / 2;
Mat targetMat(newWidth, newHeight, src.type());
Point2f src_center(targetMat.cols/2.0F, targetMat.rows/2.0F);
while(1){
src.copyTo(frame);
double radians = theta * M_PI / 180.0;
double sin = abs(std::sin(radians));
double cos = abs(std::cos(radians));
frame.copyTo(targetMat.rowRange(offsetY, offsetY + frame.rows).colRange(offsetX, offsetX + frame.cols));
Mat rot_mat = getRotationMatrix2D(src_center, theta, 1.0);
warpAffine(targetMat, frameRotated, rot_mat, targetMat.size());
//Calculate bounding rect and for exact image
//Reference:- https://stackoverflow.com/questions/19830477/find-the-bounding-rectangle-of-rotated-rectangle/19830964?noredirect=1#19830964
Rect bound_Rect(frame.cols,frame.rows,0,0);
int x1 = offsetX;
int x2 = offsetX+frame.cols;
int x3 = offsetX;
int x4 = offsetX+frame.cols;
int y1 = offsetY;
int y2 = offsetY;
int y3 = offsetY+frame.rows;
int y4 = offsetY+frame.rows;
Mat co_Ordinate = (Mat_<double>(3,4) << x1, x2, x3, x4,
y1, y2, y3, y4,
1, 1, 1, 1 );
Mat RotCo_Ordinate = rot_mat * co_Ordinate;
for(int i=0;i<4;i++){
if(RotCo_Ordinate.at<double>(0,i)<bound_Rect.x)
bound_Rect.x=(int)RotCo_Ordinate.at<double>(0,i); //access smallest
if(RotCo_Ordinate.at<double>(1,i)<bound_Rect.y)
bound_Rect.y=RotCo_Ordinate.at<double>(1,i); //access smallest y
}
for(int i=0;i<4;i++){
if(RotCo_Ordinate.at<double>(0,i)>bound_Rect.width)
bound_Rect.width=(int)RotCo_Ordinate.at<double>(0,i); //access largest x
if(RotCo_Ordinate.at<double>(1,i)>bound_Rect.height)
bound_Rect.height=RotCo_Ordinate.at<double>(1,i); //access largest y
}
bound_Rect.width=bound_Rect.width-bound_Rect.x;
bound_Rect.height=bound_Rect.height-bound_Rect.y;
Mat cropedResult;
Mat ROI = frameRotated(bound_Rect);
ROI.copyTo(cropedResult);
imshow("Result", cropedResult);
imshow("frame", frame);
imshow("rotated frame", frameRotated);
char k=waitKey();
if(k=='+') theta+=10;
if(k=='-') theta-=10;
if(k=='s') imwrite("rotated.jpg",cropedResult);
if(k==27) break;
}
Cropped Image
Thanks Robula!
Actually, you do not need to compute sine and cosine twice.
import cv2
def rotate_image(mat, angle):
# angle in degrees
height, width = mat.shape[:2]
image_center = (width/2, height/2)
rotation_mat = cv2.getRotationMatrix2D(image_center, angle, 1.)
abs_cos = abs(rotation_mat[0,0])
abs_sin = abs(rotation_mat[0,1])
bound_w = int(height * abs_sin + width * abs_cos)
bound_h = int(height * abs_cos + width * abs_sin)
rotation_mat[0, 2] += bound_w/2 - image_center[0]
rotation_mat[1, 2] += bound_h/2 - image_center[1]
rotated_mat = cv2.warpAffine(mat, rotation_mat, (bound_w, bound_h))
return rotated_mat
Thanks #Haris! Here's the Python version:
def rotate_image(image, angle):
'''Rotate image "angle" degrees.
How it works:
- Creates a blank image that fits any rotation of the image. To achieve
this, set the height and width to be the image's diagonal.
- Copy the original image to the center of this blank image
- Rotate using warpAffine, using the newly created image's center
(the enlarged blank image center)
- Translate the four corners of the source image in the enlarged image
using homogenous multiplication of the rotation matrix.
- Crop the image according to these transformed corners
'''
diagonal = int(math.sqrt(pow(image.shape[0], 2) + pow(image.shape[1], 2)))
offset_x = (diagonal - image.shape[0])/2
offset_y = (diagonal - image.shape[1])/2
dst_image = np.zeros((diagonal, diagonal, 3), dtype='uint8')
image_center = (diagonal/2, diagonal/2)
R = cv2.getRotationMatrix2D(image_center, angle, 1.0)
dst_image[offset_x:(offset_x + image.shape[0]), \
offset_y:(offset_y + image.shape[1]), \
:] = image
dst_image = cv2.warpAffine(dst_image, R, (diagonal, diagonal), flags=cv2.INTER_LINEAR)
# Calculate the rotated bounding rect
x0 = offset_x
x1 = offset_x + image.shape[0]
x2 = offset_x
x3 = offset_x + image.shape[0]
y0 = offset_y
y1 = offset_y
y2 = offset_y + image.shape[1]
y3 = offset_y + image.shape[1]
corners = np.zeros((3,4))
corners[0,0] = x0
corners[0,1] = x1
corners[0,2] = x2
corners[0,3] = x3
corners[1,0] = y0
corners[1,1] = y1
corners[1,2] = y2
corners[1,3] = y3
corners[2:] = 1
c = np.dot(R, corners)
x = int(c[0,0])
y = int(c[1,0])
left = x
right = x
up = y
down = y
for i in range(4):
x = int(c[0,i])
y = int(c[1,i])
if (x < left): left = x
if (x > right): right = x
if (y < up): up = y
if (y > down): down = y
h = down - up
w = right - left
cropped = np.zeros((w, h, 3), dtype='uint8')
cropped[:, :, :] = dst_image[left:(left+w), up:(up+h), :]
return cropped
Increase the image canvas (equally from the center without changing the image size) so that it can fit the image after rotation, then apply warpAffine:
Mat img = imread ("/path/to/image", 1);
double offsetX, offsetY;
double angle = -45;
double width = img.size().width;
double height = img.size().height;
Point2d center = Point2d (width / 2, height / 2);
Rect bounds = RotatedRect (center, img.size(), angle).boundingRect();
Mat resized = Mat::zeros (bounds.size(), img.type());
offsetX = (bounds.width - width) / 2;
offsetY = (bounds.height - height) / 2;
Rect roi = Rect (offsetX, offsetY, width, height);
img.copyTo (resized (roi));
center += Point2d (offsetX, offsetY);
Mat M = getRotationMatrix2D (center, angle, 1.0);
warpAffine (resized, resized, M, resized.size());
After searching around for a clean and easy to understand solution and reading through the answers above trying to understand them, I eventually came up with a solution using trigonometry.
I hope this helps somebody :)
import cv2
import math
def rotate_image(mat, angle):
height, width = mat.shape[:2]
image_center = (width / 2, height / 2)
rotation_mat = cv2.getRotationMatrix2D(image_center, angle, 1)
radians = math.radians(angle)
sin = math.sin(radians)
cos = math.cos(radians)
bound_w = int((height * abs(sin)) + (width * abs(cos)))
bound_h = int((height * abs(cos)) + (width * abs(sin)))
rotation_mat[0, 2] += ((bound_w / 2) - image_center[0])
rotation_mat[1, 2] += ((bound_h / 2) - image_center[1])
rotated_mat = cv2.warpAffine(mat, rotation_mat, (bound_w, bound_h))
return rotated_mat
EDIT: Please refer to #Remi Cuingnet's answer below.
A python version of rotating an image and take control of the padded black coloured region you can use the scipy.ndimage.rotate. Here is an example:
from skimage import io
from scipy import ndimage
image = io.imread('https://www.pyimagesearch.com/wp-
content/uploads/2019/12/tensorflow2_install_ubuntu_header.jpg')
io.imshow(image)
plt.show()
rotated = ndimage.rotate(image, angle=234, mode='nearest')
rotated = cv2.resize(rotated, (image.shape[:2]))
# rotated = cv2.cvtColor(rotated, cv2.COLOR_BGR2RGB)
# cv2.imwrite('rotated.jpg', rotated)
io.imshow(rotated)
plt.show()
If you have a rotation and a scaling of the image:
#include "opencv2/opencv.hpp"
#include <functional>
#include <vector>
bool compareCoords(cv::Point2f p1, cv::Point2f p2, char coord)
{
assert(coord == 'x' || coord == 'y');
if (coord == 'x')
return p1.x < p2.x;
return p1.y < p2.y;
}
int main(int argc, char** argv)
{
cv::Mat image = cv::imread("lenna.png");
float angle = 45.0; // degrees
float scale = 0.5;
cv::Mat_<float> rot_mat = cv::getRotationMatrix2D( cv::Point2f( 0.0f, 0.0f ), angle, scale );
// Image corners
cv::Point2f pA = cv::Point2f(0.0f, 0.0f);
cv::Point2f pB = cv::Point2f(image.cols, 0.0f);
cv::Point2f pC = cv::Point2f(image.cols, image.rows);
cv::Point2f pD = cv::Point2f(0.0f, image.rows);
std::vector<cv::Point2f> pts = { pA, pB, pC, pD };
std::vector<cv::Point2f> ptsTransf;
cv::transform(pts, ptsTransf, rot_mat );
using namespace std::placeholders;
float minX = std::min_element(ptsTransf.begin(), ptsTransf.end(), std::bind(compareCoords, _1, _2, 'x'))->x;
float maxX = std::max_element(ptsTransf.begin(), ptsTransf.end(), std::bind(compareCoords, _1, _2, 'x'))->x;
float minY = std::min_element(ptsTransf.begin(), ptsTransf.end(), std::bind(compareCoords, _1, _2, 'y'))->y;
float maxY = std::max_element(ptsTransf.begin(), ptsTransf.end(), std::bind(compareCoords, _1, _2, 'y'))->y;
float newW = maxX - minX;
float newH = maxY - minY;
cv::Mat_<float> trans_mat = (cv::Mat_<float>(2,3) << 0, 0, -minX, 0, 0, -minY);
cv::Mat_<float> M = rot_mat + trans_mat;
cv::Mat warpedImage;
cv::warpAffine( image, warpedImage, M, cv::Size(newW, newH) );
cv::imshow("lenna", image);
cv::imshow("Warped lenna", warpedImage);
cv::waitKey();
cv::destroyAllWindows();
return 0;
}
Thanks to everyone for this post, it has been super useful. However, I have found some black lines left and up (using Rose's python version) when rotating 90º. The problem seemed to be some int() roundings. In addition to that, I have changed the sign of the angle to make it grow clockwise.
def rotate_image(image, angle):
'''Rotate image "angle" degrees.
How it works:
- Creates a blank image that fits any rotation of the image. To achieve
this, set the height and width to be the image's diagonal.
- Copy the original image to the center of this blank image
- Rotate using warpAffine, using the newly created image's center
(the enlarged blank image center)
- Translate the four corners of the source image in the enlarged image
using homogenous multiplication of the rotation matrix.
- Crop the image according to these transformed corners
'''
diagonal = int(math.ceil(math.sqrt(pow(image.shape[0], 2) + pow(image.shape[1], 2))))
offset_x = (diagonal - image.shape[0])/2
offset_y = (diagonal - image.shape[1])/2
dst_image = np.zeros((diagonal, diagonal, 3), dtype='uint8')
image_center = (float(diagonal-1)/2, float(diagonal-1)/2)
R = cv2.getRotationMatrix2D(image_center, -angle, 1.0)
dst_image[offset_x:(offset_x + image.shape[0]), offset_y:(offset_y + image.shape[1]), :] = image
dst_image = cv2.warpAffine(dst_image, R, (diagonal, diagonal), flags=cv2.INTER_LINEAR)
# Calculate the rotated bounding rect
x0 = offset_x
x1 = offset_x + image.shape[0]
x2 = offset_x + image.shape[0]
x3 = offset_x
y0 = offset_y
y1 = offset_y
y2 = offset_y + image.shape[1]
y3 = offset_y + image.shape[1]
corners = np.zeros((3,4))
corners[0,0] = x0
corners[0,1] = x1
corners[0,2] = x2
corners[0,3] = x3
corners[1,0] = y0
corners[1,1] = y1
corners[1,2] = y2
corners[1,3] = y3
corners[2:] = 1
c = np.dot(R, corners)
x = int(round(c[0,0]))
y = int(round(c[1,0]))
left = x
right = x
up = y
down = y
for i in range(4):
x = c[0,i]
y = c[1,i]
if (x < left): left = x
if (x > right): right = x
if (y < up): up = y
if (y > down): down = y
h = int(round(down - up))
w = int(round(right - left))
left = int(round(left))
up = int(round(up))
cropped = np.zeros((w, h, 3), dtype='uint8')
cropped[:, :, :] = dst_image[left:(left+w), up:(up+h), :]
return cropped
Go version (using gocv) of #robula and #remi-cuingnet
func rotateImage(mat *gocv.Mat, angle float64) *gocv.Mat {
height := mat.Rows()
width := mat.Cols()
imgCenter := image.Point{X: width/2, Y: height/2}
rotationMat := gocv.GetRotationMatrix2D(imgCenter, -angle, 1.0)
absCos := math.Abs(rotationMat.GetDoubleAt(0, 0))
absSin := math.Abs(rotationMat.GetDoubleAt(0, 1))
boundW := float64(height) * absSin + float64(width) * absCos
boundH := float64(height) * absCos + float64(width) * absSin
rotationMat.SetDoubleAt(0, 2, rotationMat.GetDoubleAt(0, 2) + (boundW / 2) - float64(imgCenter.X))
rotationMat.SetDoubleAt(1, 2, rotationMat.GetDoubleAt(1, 2) + (boundH / 2) - float64(imgCenter.Y))
gocv.WarpAffine(*mat, mat, rotationMat, image.Point{ X: int(boundW), Y: int(boundH) })
return mat
}
I rotate in the same matrice in-memory, make a new matrice if you don't want to alter it
For anyone using Emgu.CV or OpenCvSharp wrapper in .NET, there's a C# implement of Lars Schillingmann's answer:
Emgu.CV:
using Emgu.CV;
using Emgu.CV.CvEnum;
using Emgu.CV.Structure;
public static class MatExtension
{
/// <summary>
/// <see>https://stackoverflow.com/questions/22041699/rotate-an-image-without-cropping-in-opencv-in-c/75451191#75451191</see>
/// </summary>
public static Mat Rotate(this Mat src, float degrees)
{
degrees = -degrees; // counter-clockwise to clockwise
var center = new PointF((src.Width - 1) / 2f, (src.Height - 1) / 2f);
var rotationMat = new Mat();
CvInvoke.GetRotationMatrix2D(center, degrees, 1, rotationMat);
var boundingRect = new RotatedRect(new(), src.Size, degrees).MinAreaRect();
rotationMat.Set(0, 2, rotationMat.Get<double>(0, 2) + (boundingRect.Width / 2f) - (src.Width / 2f));
rotationMat.Set(1, 2, rotationMat.Get<double>(1, 2) + (boundingRect.Height / 2f) - (src.Height / 2f));
var rotatedSrc = new Mat();
CvInvoke.WarpAffine(src, rotatedSrc, rotationMat, boundingRect.Size);
return rotatedSrc;
}
/// <summary>
/// <see>https://stackoverflow.com/questions/32255440/how-can-i-get-and-set-pixel-values-of-an-emgucv-mat-image/69537504#69537504</see>
/// </summary>
public static unsafe void Set<T>(this Mat mat, int row, int col, T value) where T : struct =>
_ = new Span<T>(mat.DataPointer.ToPointer(), mat.Rows * mat.Cols * mat.ElementSize)
{
[(row * mat.Cols) + col] = value
};
public static unsafe T Get<T>(this Mat mat, int row, int col) where T : struct =>
new ReadOnlySpan<T>(mat.DataPointer.ToPointer(), mat.Rows * mat.Cols * mat.ElementSize)
[(row * mat.Cols) + col];
}
OpenCvSharp:
OpenCvSharp already has Mat.Set<> method that functions same as mat.at<> in the original OpenCV, so we don't have to copy these methods from How can I get and set pixel values of an EmguCV Mat image?
using OpenCvSharp;
public static class MatExtension
{
/// <summary>
/// <see>https://stackoverflow.com/questions/22041699/rotate-an-image-without-cropping-in-opencv-in-c/75451191#75451191</see>
/// </summary>
public static Mat Rotate(this Mat src, float degrees)
{
degrees = -degrees; // counter-clockwise to clockwise
var center = new Point2f((src.Width - 1) / 2f, (src.Height - 1) / 2f);
var rotationMat = Cv2.GetRotationMatrix2D(center, degrees, 1);
var boundingRect = new RotatedRect(new(), new Size2f(src.Width, src.Height), degrees).BoundingRect();
rotationMat.Set(0, 2, rotationMat.Get<double>(0, 2) + (boundingRect.Width / 2f) - (src.Width / 2f));
rotationMat.Set(1, 2, rotationMat.Get<double>(1, 2) + (boundingRect.Height / 2f) - (src.Height / 2f));
var rotatedSrc = new Mat();
Cv2.WarpAffine(src, rotatedSrc, rotationMat, boundingRect.Size);
return rotatedSrc;
}
}
Also, you may want to mutate the src param instead of returning a new clone of it during rotation, for that you can just set the det param of WrapAffine() as the same with src: c++, opencv: Is it safe to use the same Mat for both source and destination images in filtering operation?
CvInvoke.WarpAffine(src, src, rotationMat, boundingRect.Size);
This is being called as in-place mode: https://answers.opencv.org/question/24/do-all-opencv-functions-support-in-place-mode-for-their-arguments/
Can the OpenCV function cvtColor be used to convert a matrix in place?
If it is just to rotate 90 degrees, maybe this code could be useful.
Mat img = imread("images.jpg");
Mat rt(img.rows, img.rows, CV_8U);
Point2f pc(img.cols / 2.0, img.rows / 2.0);
Mat r = getRotationMatrix2D(pc, 90, 1);
warpAffine(img, rt, r, rt.size());
imshow("rotated", rt);
Hope it's useful.
By the way, for 90º rotations only, here is a more efficient + accurate function:
def rotate_image_90(image, angle):
angle = -angle
rotated_image = image
if angle == 0:
pass
elif angle == 90:
rotated_image = np.rot90(rotated_image)
elif angle == 180 or angle == -180:
rotated_image = np.rot90(rotated_image)
rotated_image = np.rot90(rotated_image)
elif angle == -90:
rotated_image = np.rot90(rotated_image)
rotated_image = np.rot90(rotated_image)
rotated_image = np.rot90(rotated_image)
return rotated_image

Is there an easy way/algorithm to match 2 clouds of 2D points?

I am wondering if there is an easy way to match (register) 2 clouds of 2d points.
Let's say I have an object represented by points and an cluttered 2nd image with the object points and noise (noise in a way of points that are useless).
Basically the object can be 2d rotated as well as translated and scaled.
I know there is the ICP - Algorithm but I think that this is not a good approach due to high noise.
I hope that you understand what i mean. please ask if (im sure it is) anything is unclear.
cheers
Here is the function that finds translation and rotation. Generalization to scaling, weighted points, and RANSAC are straight forward. I used openCV library for visualization and SVD. The function below combines data generation, Unit Test , and actual solution.
// rotation and translation in 2D from point correspondences
void rigidTransform2D(const int N) {
// Algorithm: http://igl.ethz.ch/projects/ARAP/svd_rot.pdf
const bool debug = false; // print more debug info
const bool add_noise = true; // add noise to imput and output
srand(time(NULL)); // randomize each time
/*********************************
* Creat data with some noise
**********************************/
// Simulated transformation
Point2f T(1.0f, -2.0f);
float a = 30.0; // [-180, 180], see atan2(y, x)
float noise_level = 0.1f;
cout<<"True parameters: rot = "<<a<<"deg., T = "<<T<<
"; noise level = "<<noise_level<<endl;
// noise
vector<Point2f> noise_src(N), noise_dst(N);
for (int i=0; i<N; i++) {
noise_src[i] = Point2f(randf(noise_level), randf(noise_level));
noise_dst[i] = Point2f(randf(noise_level), randf(noise_level));
}
// create data with noise
vector<Point2f> src(N), dst(N);
float Rdata = 10.0f; // radius of data
float cosa = cos(a*DEG2RAD);
float sina = sin(a*DEG2RAD);
for (int i=0; i<N; i++) {
// src
float x1 = randf(Rdata);
float y1 = randf(Rdata);
src[i] = Point2f(x1,y1);
if (add_noise)
src[i] += noise_src[i];
// dst
float x2 = x1*cosa - y1*sina;
float y2 = x1*sina + y1*cosa;
dst[i] = Point2f(x2,y2) + T;
if (add_noise)
dst[i] += noise_dst[i];
if (debug)
cout<<i<<": "<<src[i]<<"---"<<dst[i]<<endl;
}
// Calculate data centroids
Scalar centroid_src = mean(src);
Scalar centroid_dst = mean(dst);
Point2f center_src(centroid_src[0], centroid_src[1]);
Point2f center_dst(centroid_dst[0], centroid_dst[1]);
if (debug)
cout<<"Centers: "<<center_src<<", "<<center_dst<<endl;
/*********************************
* Visualize data
**********************************/
// Visualization
namedWindow("data", 1);
float w = 400, h = 400;
Mat Mdata(w, h, CV_8UC3); Mdata = Scalar(0);
Point2f center_img(w/2, h/2);
float scl = 0.4*min(w/Rdata, h/Rdata); // compensate for noise
scl/=sqrt(2); // compensate for rotation effect
Point2f dT = (center_src+center_dst)*0.5; // compensate for translation
for (int i=0; i<N; i++) {
Point2f p1(scl*(src[i] - dT));
Point2f p2(scl*(dst[i] - dT));
// invert Y axis
p1.y = -p1.y; p2.y = -p2.y;
// add image center
p1+=center_img; p2+=center_img;
circle(Mdata, p1, 1, Scalar(0, 255, 0));
circle(Mdata, p2, 1, Scalar(0, 0, 255));
line(Mdata, p1, p2, Scalar(100, 100, 100));
}
/*********************************
* Get 2D rotation and translation
**********************************/
markTime();
// subtract centroids from data
for (int i=0; i<N; i++) {
src[i] -= center_src;
dst[i] -= center_dst;
}
// compute a covariance matrix
float Cxx = 0.0, Cxy = 0.0, Cyx = 0.0, Cyy = 0.0;
for (int i=0; i<N; i++) {
Cxx += src[i].x*dst[i].x;
Cxy += src[i].x*dst[i].y;
Cyx += src[i].y*dst[i].x;
Cyy += src[i].y*dst[i].y;
}
Mat Mcov = (Mat_<float>(2, 2)<<Cxx, Cxy, Cyx, Cyy);
if (debug)
cout<<"Covariance Matrix "<<Mcov<<endl;
// SVD
cv::SVD svd;
svd = SVD(Mcov, SVD::FULL_UV);
if (debug) {
cout<<"U = "<<svd.u<<endl;
cout<<"W = "<<svd.w<<endl;
cout<<"V transposed = "<<svd.vt<<endl;
}
// rotation = V*Ut
Mat V = svd.vt.t();
Mat Ut = svd.u.t();
float det_VUt = determinant(V*Ut);
Mat W = (Mat_<float>(2, 2)<<1.0, 0.0, 0.0, det_VUt);
float rot[4];
Mat R_est(2, 2, CV_32F, rot);
R_est = V*W*Ut;
if (debug)
cout<<"Rotation matrix: "<<R_est<<endl;
float cos_est = rot[0];
float sin_est = rot[2];
float ang = atan2(sin_est, cos_est);
// translation = mean_dst - R*mean_src
Point2f center_srcRot = Point2f(
cos_est*center_src.x - sin_est*center_src.y,
sin_est*center_src.x + cos_est*center_src.y);
Point2f T_est = center_dst - center_srcRot;
// RMSE
double RMSE = 0.0;
for (int i=0; i<N; i++) {
Point2f dst_est(
cos_est*src[i].x - sin_est*src[i].y,
sin_est*src[i].x + cos_est*src[i].y);
RMSE += SQR(dst[i].x - dst_est.x) + SQR(dst[i].y - dst_est.y);
}
if (N>0)
RMSE = sqrt(RMSE/N);
// Final estimate msg
cout<<"Estimate = "<<ang*RAD2DEG<<"deg., T = "<<T_est<<"; RMSE = "<<RMSE<<endl;
// show image
printTime(1);
imshow("data", Mdata);
waitKey(-1);
return;
} // rigidTransform2D()
// --------------------------- 3DOF
// calculates squared error from two point mapping; assumes rotation around Origin.
inline float sqErr_3Dof(Point2f p1, Point2f p2,
float cos_alpha, float sin_alpha, Point2f T) {
float x2_est = T.x + cos_alpha * p1.x - sin_alpha * p1.y;
float y2_est = T.y + sin_alpha * p1.x + cos_alpha * p1.y;
Point2f p2_est(x2_est, y2_est);
Point2f dp = p2_est-p2;
float sq_er = dp.dot(dp); // squared distance
//cout<<dp<<endl;
return sq_er;
}
// calculate RMSE for point-to-point metrics
float RMSE_3Dof(const vector<Point2f>& src, const vector<Point2f>& dst,
const float* param, const bool* inliers, const Point2f center) {
const bool all_inliers = (inliers==NULL); // handy when we run QUADRTATIC will all inliers
unsigned int n = src.size();
assert(n>0 && n==dst.size());
float ang_rad = param[0];
Point2f T(param[1], param[2]);
float cos_alpha = cos(ang_rad);
float sin_alpha = sin(ang_rad);
double RMSE = 0.0;
int ninliers = 0;
for (unsigned int i=0; i<n; i++) {
if (all_inliers || inliers[i]) {
RMSE += sqErr_3Dof(src[i]-center, dst[i]-center, cos_alpha, sin_alpha, T);
ninliers++;
}
}
//cout<<"RMSE = "<<RMSE<<endl;
if (ninliers>0)
return sqrt(RMSE/ninliers);
else
return LARGE_NUMBER;
}
// Sets inliers and returns their count
inline int setInliers3Dof(const vector<Point2f>& src, const vector <Point2f>& dst,
bool* inliers,
const float* param,
const float max_er,
const Point2f center) {
float ang_rad = param[0];
Point2f T(param[1], param[2]);
// set inliers
unsigned int ninliers = 0;
unsigned int n = src.size();
assert(n>0 && n==dst.size());
float cos_ang = cos(ang_rad);
float sin_ang = sin(ang_rad);
float max_sqErr = max_er*max_er; // comparing squared values
if (inliers==NULL) {
// just get the number of inliers (e.g. after QUADRATIC fit only)
for (unsigned int i=0; i<n; i++) {
float sqErr = sqErr_3Dof(src[i]-center, dst[i]-center, cos_ang, sin_ang, T);
if ( sqErr < max_sqErr)
ninliers++;
}
} else {
// get the number of inliers and set them (e.g. for RANSAC)
for (unsigned int i=0; i<n; i++) {
float sqErr = sqErr_3Dof(src[i]-center, dst[i]-center, cos_ang, sin_ang, T);
if ( sqErr < max_sqErr) {
inliers[i] = 1;
ninliers++;
} else {
inliers[i] = 0;
}
}
}
return ninliers;
}
// fits 3DOF (rotation and translation in 2D) with least squares.
float fit3DofQUADRATICold(const vector<Point2f>& src, const vector<Point2f>& dst,
float* param, const bool* inliers, const Point2f center) {
const bool all_inliers = (inliers==NULL); // handy when we run QUADRTATIC will all inliers
unsigned int n = src.size();
assert(dst.size() == n);
// count inliers
int ninliers;
if (all_inliers) {
ninliers = n;
} else {
ninliers = 0;
for (unsigned int i=0; i<n; i++){
if (inliers[i])
ninliers++;
}
}
// under-dermined system
if (ninliers<2) {
// param[0] = 0.0f; // ?
// param[1] = 0.0f;
// param[2] = 0.0f;
return LARGE_NUMBER;
}
/*
* x1*cosx(a)-y1*sin(a) + Tx = X1
* x1*sin(a)+y1*cos(a) + Ty = Y1
*
* approximation for small angle a (radians) sin(a)=a, cos(a)=1;
*
* x1*1 - y1*a + Tx = X1
* x1*a + y1*1 + Ty = Y1
*
* in matrix form M1*h=M2
*
* 2n x 4 4 x 1 2n x 1
*
* -y1 1 0 x1 * a = X1
* x1 0 1 y1 Tx Y1
* Ty
* 1=Z
* ----------------------------
* src1 res src2
*/
// 4 x 1
float res_ar[4]; // alpha, Tx, Ty, 1
Mat res(4, 1, CV_32F, res_ar); // 4 x 1
// 2n x 4
Mat src1(2*ninliers, 4, CV_32F); // 2n x 4
// 2n x 1
Mat src2(2*ninliers, 1, CV_32F); // 2n x 1: [X1, Y1, X2, Y2, X3, Y3]'
for (unsigned int i=0, row_cnt = 0; i<n; i++) {
// use inliers only
if (all_inliers || inliers[i]) {
float x = src[i].x - center.x;
float y = src[i].y - center.y;
// first row
// src1
float* rowPtr = src1.ptr<float>(row_cnt);
rowPtr[0] = -y;
rowPtr[1] = 1.0f;
rowPtr[2] = 0.0f;
rowPtr[3] = x;
// src2
src2.at<float> (0, row_cnt) = dst[i].x - center.x;
// second row
row_cnt++;
// src1
rowPtr = src1.ptr<float>(row_cnt);
rowPtr[0] = x;
rowPtr[1] = 0.0f;
rowPtr[2] = 1.0f;
rowPtr[3] = y;
// src2
src2.at<float> (0, row_cnt) = dst[i].y - center.y;
}
}
cv::solve(src1, src2, res, DECOMP_SVD);
// estimators
float alpha_est;
Point2f T_est;
// original
alpha_est = res.at<float>(0, 0);
T_est = Point2f(res.at<float>(1, 0), res.at<float>(2, 0));
float Z = res.at<float>(3, 0);
if (abs(Z-1.0) > 0.1) {
//cout<<"Bad Z in fit3DOF(), Z should be close to 1.0 = "<<Z<<endl;
//return LARGE_NUMBER;
}
param[0] = alpha_est; // rad
param[1] = T_est.x;
param[2] = T_est.y;
// calculate RMSE
float RMSE = RMSE_3Dof(src, dst, param, inliers, center);
return RMSE;
} // fit3DofQUADRATICOLd()
// fits 3DOF (rotation and translation in 2D) with least squares.
float fit3DofQUADRATIC(const vector<Point2f>& src_, const vector<Point2f>& dst_,
float* param, const bool* inliers, const Point2f center) {
const bool debug = false; // print more debug info
const bool all_inliers = (inliers==NULL); // handy when we run QUADRTATIC will all inliers
assert(dst_.size() == src_.size());
int N = src_.size();
// collect inliers
vector<Point2f> src, dst;
int ninliers;
if (all_inliers) {
ninliers = N;
src = src_; // copy constructor
dst = dst_;
} else {
ninliers = 0;
for (int i=0; i<N; i++){
if (inliers[i]) {
ninliers++;
src.push_back(src_[i]);
dst.push_back(dst_[i]);
}
}
}
if (ninliers<2) {
param[0] = 0.0f; // default return when there is not enough points
param[1] = 0.0f;
param[2] = 0.0f;
return LARGE_NUMBER;
}
/* Algorithm: Least-Square Rigid Motion Using SVD by Olga Sorkine
* http://igl.ethz.ch/projects/ARAP/svd_rot.pdf
*
* Subtract centroids, calculate SVD(cov),
* R = V[1, det(VU')]'U', T = mean_q-R*mean_p
*/
// Calculate data centroids
Scalar centroid_src = mean(src);
Scalar centroid_dst = mean(dst);
Point2f center_src(centroid_src[0], centroid_src[1]);
Point2f center_dst(centroid_dst[0], centroid_dst[1]);
if (debug)
cout<<"Centers: "<<center_src<<", "<<center_dst<<endl;
// subtract centroids from data
for (int i=0; i<ninliers; i++) {
src[i] -= center_src;
dst[i] -= center_dst;
}
// compute a covariance matrix
float Cxx = 0.0, Cxy = 0.0, Cyx = 0.0, Cyy = 0.0;
for (int i=0; i<ninliers; i++) {
Cxx += src[i].x*dst[i].x;
Cxy += src[i].x*dst[i].y;
Cyx += src[i].y*dst[i].x;
Cyy += src[i].y*dst[i].y;
}
Mat Mcov = (Mat_<float>(2, 2)<<Cxx, Cxy, Cyx, Cyy);
Mcov /= (ninliers-1);
if (debug)
cout<<"Covariance-like Matrix "<<Mcov<<endl;
// SVD of covariance
cv::SVD svd;
svd = SVD(Mcov, SVD::FULL_UV);
if (debug) {
cout<<"U = "<<svd.u<<endl;
cout<<"W = "<<svd.w<<endl;
cout<<"V transposed = "<<svd.vt<<endl;
}
// rotation (V*Ut)
Mat V = svd.vt.t();
Mat Ut = svd.u.t();
float det_VUt = determinant(V*Ut);
Mat W = (Mat_<float>(2, 2)<<1.0, 0.0, 0.0, det_VUt);
float rot[4];
Mat R_est(2, 2, CV_32F, rot);
R_est = V*W*Ut;
if (debug)
cout<<"Rotation matrix: "<<R_est<<endl;
float cos_est = rot[0];
float sin_est = rot[2];
float ang = atan2(sin_est, cos_est);
// translation (mean_dst - R*mean_src)
Point2f center_srcRot = Point2f(
cos_est*center_src.x - sin_est*center_src.y,
sin_est*center_src.x + cos_est*center_src.y);
Point2f T_est = center_dst - center_srcRot;
// Final estimate msg
if (debug)
cout<<"Estimate = "<<ang*RAD2DEG<<"deg., T = "<<T_est<<endl;
param[0] = ang; // rad
param[1] = T_est.x;
param[2] = T_est.y;
// calculate RMSE
float RMSE = RMSE_3Dof(src_, dst_, param, inliers, center);
return RMSE;
} // fit3DofQUADRATIC()
// RANSAC fit in 3DOF: 1D rot and 2D translation (maximizes the number of inliers)
// NOTE: no data normalization is currently performed
float fit3DofRANSAC(const vector<Point2f>& src, const vector<Point2f>& dst,
float* best_param, bool* inliers,
const Point2f center ,
const float inlierMaxEr,
const int niter) {
const int ITERATION_TO_SETTLE = 2; // iterations to settle inliers and param
const float INLIERS_RATIO_OK = 0.95f; // stopping criterion
// size of data vector
unsigned int N = src.size();
assert(N==dst.size());
// unrealistic case
if(N<2) {
best_param[0] = 0.0f; // ?
best_param[1] = 0.0f;
best_param[2] = 0.0f;
return LARGE_NUMBER;
}
unsigned int ninliers; // current number of inliers
unsigned int best_ninliers = 0; // number of inliers
float best_rmse = LARGE_NUMBER; // error
float cur_rmse; // current distance error
float param[3]; // rad, Tx, Ty
vector <Point2f> src_2pt(2), dst_2pt(2);// min set of 2 points (1 correspondence generates 2 equations)
srand (time(NULL));
// iterations
for (int iter = 0; iter<niter; iter++) {
#ifdef DEBUG_RANSAC
cout<<"iteration "<<iter<<": ";
#endif
// 1. Select a random set of 2 points (not obligatory inliers but valid)
int i1, i2;
i1 = rand() % N; // [0, N[
i2 = i1;
while (i2==i1) {
i2 = rand() % N;
}
src_2pt[0] = src[i1]; // corresponding points
src_2pt[1] = src[i2];
dst_2pt[0] = dst[i1];
dst_2pt[1] = dst[i2];
bool two_inliers[] = {true, true};
// 2. Quadratic fit for 2 points
cur_rmse = fit3DofQUADRATIC(src_2pt, dst_2pt, param, two_inliers, center);
// 3. Recalculate to settle params and inliers using a larger set
for (int iter2=0; iter2<ITERATION_TO_SETTLE; iter2++) {
ninliers = setInliers3Dof(src, dst, inliers, param, inlierMaxEr, center); // changes inliers
cur_rmse = fit3DofQUADRATIC(src, dst, param, inliers, center); // changes cur_param
}
// potential ill-condition or large error
if (ninliers<2) {
#ifdef DEBUG_RANSAC
cout<<" !!! less than 2 inliers "<<endl;
#endif
continue;
} else {
#ifdef DEBUG_RANSAC
cout<<" "<<ninliers<<" inliers; ";
#endif
}
#ifdef DEBUG_RANSAC
cout<<"; recalculate: RMSE = "<<cur_rmse<<", "<<ninliers <<" inliers";
#endif
// 4. found a better solution?
if (ninliers > best_ninliers) {
best_ninliers = ninliers;
best_param[0] = param[0];
best_param[1] = param[1];
best_param[2] = param[2];
best_rmse = cur_rmse;
#ifdef DEBUG_RANSAC
cout<<" --- Solution improved: "<<
best_param[0]<<", "<<best_param[1]<<", "<<param[2]<<endl;
#endif
// exit condition
float inlier_ratio = (float)best_ninliers/N;
if (inlier_ratio > INLIERS_RATIO_OK) {
#ifdef DEBUG_RANSAC
cout<<"Breaking early after "<< iter+1<<
" iterations; inlier ratio = "<<inlier_ratio<<endl;
#endif
break;
}
} else {
#ifdef DEBUG_RANSAC
cout<<endl;
#endif
}
} // iterations
// 5. recreate inliers for the best parameters
ninliers = setInliers3Dof(src, dst, inliers, best_param, inlierMaxEr, center);
return best_rmse;
} // fit3DofRANSAC()
Let me first make sure I'm interpreting your question correctly. You have two sets of 2D points, one of which contains all "good" points corresponding to some object of interest, and one of which contains those points under an affine transformation with noisy points added. Right?
If that's correct, then there is a fairly reliable and efficient way to both reject noisy points and determine the transformation between your points of interest. The algorithm that is usually used to reject noisy points ("outliers") is known as RANSAC, and the algorithm used to determine the transformation can take several forms, but the most current state of the art is known as the five-point algorithm and can be found here -- a MATLAB implementation can be found here.
Unfortunately I don't know of a mature implementation of both of those combined; you'll probably have to do some work of your own to implement RANSAC and integrate it with the five point algorithm.
Edit:
Actually, OpenCV has an implementation that is overkill for your task (meaning it will work but will take more time than necessary) but is ready to work out of the box. The function of interest is called cv::findFundamentalMat.
I believe you are looking for something like David Lowe's SIFT (Scale Invariant Feature Transform). Other option is SURF (SIFT is patent protected). The OpenCV computer library presents a SURF implementation
I would try and use distance geometry (http://en.wikipedia.org/wiki/Distance_geometry) for this
Generate a scalar for each point by summing its distances to all neighbors within a certain radius. Though not perfect, this will be good discriminator for each point.
Then put all the scalars in a map that allows a point (p) to be retrieve by its scalar (s) plus/minus some delta
M(s+delta) = p (e.g K-D Tree) (http://en.wikipedia.org/wiki/Kd-tree)
Put all the reference set of 2D points in the map
On the other (test) set of 2D points:
foreach test scaling (esp if you have a good idea what typical scaling values are)
...scale each point by S
...recompute the scalars of the test set of points
......for each point P in test set (or perhaps a sample for faster method)
.........lookup point in reference scalar map within some delta
.........discard P if no mapping found
.........else foreach P' point found
............examine neighbors of P and see if they have corresponding scalars in the reference map within some delta (i.e reference point has neighbors with approx same value)
......... if all points tested have a mapping in the reference set, you have found a mapping of test point P onto reference point P' -> record mapping of test point to reference point
......discard scaling if no mappings recorded
Note this is trivially parallelized in several different places
This is off the top of my head, drawing from research I did years ago. It lacks fine details but the general idea is clear: find points in the noisy (test) graph whose distances to their closest neighbors are roughly the same as the reference set. Noisy graphs will have to measure the distances with a larger allowed error that less noisy graphs.
The algorithm works perfectly for graphs with no noise.
Edit: there is a refinement for the algorithm that doesn't require looking at different scalings. When computing the scalar for each point, use a relative distance measure instead. This will be invariant of transform
From C++, you could use ITK to do the image registration. It includes many registration functions that will work in the presence of noise.
The KLT (Kanade Lucas Tomasi) Feature Tracker makes a Affine Consistency Check of tracked features. The Affine Consistency Check takes into account translation, rotation and scaling. I don't know if it is of help to you, because you can't use the function (which calculates the affine transformation of a rectangular region) directly. But maybe you can learn from the documentation and source-code, how the affine transformation can be calculated and adapt it to your problem (clouds of points instead of a rectangular region).
You want want the Denton-Beveridge point matching algorithm. Source code at the bottom of the page linked below, and there is also a paper that explain the algorithm and why Ransac is a bad choice for this problem.
http://jasondenton.me/pntmatch.html