I have a code on my computer uses Petsc which depends on mpi. On my computer it works well. I put it on cluster, exported paths of gcc, Petsc and openmpi (although I was using mpich on my computer I hope openmpi will also work) to LD_LIBRARY_PATH and PATH. I also changed paths in makefile. Petsc, gcc, openmpi were all available on cluster so I did not configure anything. When I did make, compiler gave error:
fatal error: mpi.h: No such file or directory
I know I did not give complete information but I can tell more if needed. How can I make the Petsc to know where is mpi.h?
Typically, you should use mpicc (or mpicxx for C++) to compile instead of gcc (or g++ for C++). These commands are simple wrappers around gcc and g++ that simply add in the appropriate -I/path/to/mpi/includes and -L/path/to/mpi/libs automatically and should be included with your openmpi install. In the absence of that, simply add -I/path/to/mpi/includes in your command to compile the appropriate files. This tells the compiler where to look for the appropriate header files.
To answer the question. To prevent a C/C++ editor from showing errors as you tyoe in the "special code" just use:
#include </usr/include/mpi/mpi.h>
which seems to be a link -- but doing that turns off the errors in Netbeans editor so I can code without distraction.
Note: Using Ubuntu 18.04 Desktop as editing machine -- and testing run machine -- but I compile manually using mpic as noted previously.
sudo mpicc c_pi.c -o c_pi
and then...
mpiexec ./c_pi
hth
Related
I'm pretty new to C++ and I'm having a hard time trying to install external libraries. I want to get started with GUI programming and I have searched all over, but I cannot find a way to add wxWidgets to Code::Blocks. I've tried a few different guides and Stack Overflow responses but none of them have actually worked.
I'm using this 'Hello World!' test program to see if it works, every time I try to run it I just get this error: fatal error: wx/wxprec.h: No such file or directory. I can't seem to figure out how to tell Code::Blocks where the library is.
The most recent resource I have tried is this one, I followed it step by step, but still I got this error.
What linker/compiler settings do I need to use in Code::Blocks? What lib files do I need to add and where do I add them to? Do I need to build the .zip file? How do I do this?
Please could I get a step by step guide on exactly how to add wxWidgets (or indeed any external library) to Code::Blocks as well as some information on why certain things are required?
Here's what I tried
Following the steps in the link above, this is what I have in my build options:
I tried adding this in my global compiler settings...
I still have this error...
CodeBlocks seems to have some special wxWidgets integration, but it didn't always work for me, so I prefer to set up the project manually.
CB ships an outdated compiler. While it may work, updating it is a good idea.
Get rid of the MinGW version shipped with CB, or at least remove it from the PATH.
Install MSYS2. Use it to install a new GCC and GDB, as described in the link.
Configure CB to use MSYS2's GCC and GDB, by specifying the paths to them in the CB config (they're installed to C:\msys64\mingw64\bin).
wxWidgets seem to ship prebuilt libraries for MinGW, but since we're using MSYS2, we might as well use the version provided by MSYS2.
Use MSYS2 to install wxWidgets: pacman -S mingw-w64-x86_64-wxWidgets3.2-msw.
MSYS2 seems to ship several different versions of wxWidgets: 3.0, 3.1, 3.2, and each of them in two variants: -msw and -gtk. 3.2-msw looks like a reasonable choice to me, but I haven't used this library before.
wxWidgets doesn't seem to use the standard way of telling you what compiler flags to use (which would be pkg-config, or at least a CMake file). Instead they ship their own script to determine the flags, called wx-config.
Run wx-config --cflags to get the compiler flags, and run wx-config --libs to get the linker flags. Paste them into the project settings (compiler settings and linker settings respectively). Edit the project settings, not the global compiler settings.
I'm using ortools in c++ to model a vehicle routing problem. I was wondering whether there was a way to compile the code using my own Makefile by including the proper flags for the compiler, so that I don't have to use
make build SOURCE=/path/to/my/program
I have compiled ortools from source on Debian 10, making sure to follow the proper instructions on the guide (make third-party then make cc then make install_cc). make test_cc runs and finished without problems, so I don't think there is any issues with the installation.
The only clue that I found about this topic was someone writing they used
g++ -std=c++11 -o my_program my_program.cc -I/usr/local/include/or-tools -lortools
to compile their program, but upon trying that, I have a lot of undefined references. I have read somewhere that one should use -std=c++17 instead of -std=c++11 but either way it does not work.
Please let me know if you need more details.
All binary packages comes with a supplied makefile.
You can see the source here: https://github.com/google/or-tools/blob/stable/tools/Makefile.cc.java.dotnet
If you run make detect_cc. It will print out all compiling and linking options for your platform.
Since ortools is a shared library, you will have to specify its path using the environment variable LD_LIBRARY_PATH in addition to specifying the path using the -L flag.
export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:<path-to-lib>.
You can put the export command above in the .bashrc file or run it every time your run the code. Also, you will have to used C++17.
I am trying to report a bug for a project using Bazel. As part of the issue report I would like to include information about the used C++ compiler.
Which command can I use to do so?
bazel build -s //the_target shows me that external/local_config_cc/wrapped_clang seems to be the compiler. In bazel-<project>/... I can find that path, but running the executable wrapped_clang in there, just leads to an abort.
This answer only applies if you're using Bazel autoconfigured C++ toolchain. If you don't you'll have to modify it.
So for debugging the best would be to zip entire local_config_cc and also to provide version of the compiler ($CC --version). You get the local_config_cc at:
`bazel info output_base`/external/local_config_cc
Path to the compiler is written into the wrapped_clang script in case of the toolchain that supports both C++ and ObjC (this one gets enabled when Xcode is properly detected). C++ only toolchain invokes compiler directly (but the CROSSTOOL file can still be useful for debugging). And just in case, you can force C++ only toolchain by setting BAZEL_USE_CPP_ONLY_TOOLCHAIN=1 environment variable.
I wrote c++ code that in including some libraries that I included using -l option. The code is right on my machine but I want finally run this code on another machine named B. I built it on my machine using c++11 and GNU GCC Compiler and attempt to run it on machine B but it errors :
error while loading shared libraries: libcppkafka.so.0.1: cannot open shared object file: No such file or directory
How can I build c++ code with all dependencies to disappear this error?
note: libcppkafka.so.0.1 is in my machine in path /usr/local/lib
note: I use codeblock IDE, so I appreciate that if solution will be codeblock compatible
note: Both machines are ubuntu 16.04
In order to achieve your goal you have 2 options.
You can copy your shared libraries(libcppkafka.so) with your executable and configure its location correctly.
Or you can avoid shared libraries by statically linking them to your program. For this you'll need to have static version of those libraries (libcppkafka in your case)
Since both machines are running the same distribution and version (Ubuntu 16.04), you could find out on the first machine the installed and useful packages, and install these on the second machine.
You'll need to copy the non-packaged things, e.g. in (some part of) /usr/local/lib
You could consider making a real .deb package for your thing (but that is more work).
Notice that an IDE is just an IDE and don't compile anything (an IDE is running external compiler commands; your compiler is GCC invoked as g++). You should perhaps compile on the command line (and you could even make that some shell script, to run on the other machine).
So I'm using Anaconda to run Python 2.7 32-bit on my company's server. That works dandy. Anaconda came with MinGW, so I'm attempting to use the g++ compiler in there. Everything works for me. I can compile c++ source, and then run the resulting executable. The issue comes when coworkers try to do the same. Apparently, the g++ compiler creates a dependency for the executable it makes on a particular dll located within Anaconda. I have a path variable to where this dll lives, my coworkers do not, thus, they cannot run any executable made by g++.
Is there a way to specify where this dll dependency is when I compile executable so that anyone can use them? Something like:
g++ someCode.cpp -o someCode.exe locationOfDll=path2dll
Just to be clear, everyone can successfully compile c++ source code, but only I can run the resulting executable. Thanks in advance
EDIT: I forgot to mention that simply giving everyone the path variable is not an option.
Does this help? It discusses updating the library search paths.
http://www.mingw.org/wiki/HOWTO_Specify_the_Location_of_Libraries_for_use_with_MinGW