I'm trying to run the example "Scale_Space_Surface_Reconstruction_3" from CGAL library on CodeBlocks IDE on Ubuntu platform, as it would be nice
to have the IDE support for code completion and a more automatic configuration process.
I managed to successfully execute it by compiling it with cmake on the terminal window.
However, on CodeBlocks, after creating a new project and copying the code from the example, I get the following error:
/usr/local/include/CGAL/Scale_Space_Reconstruction_3/Scale_Space_Surface_Reconstruction_Impl_3.h:165:23: error: variable or field 'pca' declared void
Approximation pca( _nn[i]);
By looking inside the code, I found out that this is due to an undefined Macro CGAL_EIGEN3_ENABLED. As my experiment shows, if I define the macro at
pre-processing time, I do not get the same error. That is because, by defining the macro, the type definition Default::Get< wA,void>::type, becomes
Default::Get< wA, Weighted_PCA_approximation_3<Gt>>::type, and the compiler does not complain any more.
Unfortunately, as a deserved prize for messing with things I do not really understand, I get a segmentation fault at runtime.
How should I change the compiler options of codeBlocks to make the compilation succeed, and the executable run successfully?
I have the following include paths:
/usr/local/lib/CGAL/ /usr/local/include /usr/include /usr/include/eigen3.
I also included the following libraries:
libCGAL.so, libCGAL_Core.so, libCGAL_ImageIO.so, libgmp.so, libmpfr.so, libtbb.so, libtbbmalloc.so, libtbbmalloc_proxy.so
Related
When I compile a project using cross compiler,I come across the following error:
internal compiler error: in decode_addr_const, at varasm.c:2632
Where can I find the varasm.c file?I searched the project directory and cross compiler directory,but I didn't find it.
Thanks for helpping,Light
The compiler maker has that file, and probably won't give it to you.
But as it seems to be an error in the compiler, you can either contact them / file a bug report, or try to avoid the error by changing your code a bit (which is a guessing game, as you don't know how you made it run into the error). Or use another compiler, if there are choices.
I am trying to work through this tutorial on OpenCL, on a Windows 10 dev system which has integrated Intel HD graphics. I have installed Intel's OpenCL SDK. I have added the include directory from the SDK install into Properties > C/C++ General > Paths and Symbols > Includes. I am using MinGW as my compiler for Eclipse
In response to a number of linker errors that popped up when I first tried to compile the project, I set up the linker in eclipse to point to opencl.lib as outlined in this answer.
That took care of the linker errors, but there's an offending line from the tutorial which makes it impossible for the tutorial boiler-plate to compile:
87 cl_int result = program.build({ device }, "");
Set up as I am, this gives me the following warning and error:
..\src\main.cpp:93:32: warning: extended initializer lists only available with -std=c++11 or -std=gnu++11
..\src\main.cpp:93:45: error: no matching function for call to 'cl::Program::build(<brace-enclosed initializer list>, const char [1])'
If I'm reading this correctly (I haven't used C++ since before C++11 was a thing), the compiler is first warning me that it doesn't properly recognize what {device} is supposed to be (a vector of devices which has only one entry in it, initialized earlier in the code). Then, since it doesn't recognize {device}, the compiler errors out because it can't find a signature for cl::Program::build with arguments that match whatever-the-heck it's interpreting {device} to be.
Following the warning's advice, I followed the instructions given in this answer to add the -std=c++11 option for the compiler. However, when I do that the linker errors come back. Trying to compile with these options results in about thirty errors which all basically say they can't find any reference for the CL calls in the library files. For example:
C:/Program Files (x86)/Intel/OpenCL SDK/6.3/include/CL/cl.hpp:1753: undefined reference to `clGetPlatformInfo#20'
How do I make the compiler behave? I think I remember reading somewhere that the order of compiler options in the command line matters withe regards to linking, could that be messing up my compile since I added the -std=c++11 option?
I (sort of) figured out why the compiler was unhappy--the library I was linking was the x64 library for OpenCL installed in [base Intel dir]\OpenCL SDK\6.3\lib\x64, but (I think?) my compiler is not set up to create x64 apps. When I link to the .lib file in OpenCL SDK\6.3\lib\x86 my linker errors disappeared.
I am trying to compile the boost log library and I keep getting this error from the dump_avx2.cpp file
error: always_inline function '_mm256_set1_epi32' requires target feature 'sse4.2', but would be inlined into function 'dump_data_avx2' that is compiled without support for 'sse4.2'
boost/boost/libs/log/src/dump_avx2.cpp:71:31: note: expanded from macro 'BOOST_LOG_AUX_MM_CONSTANTS'
const __m256i mm_char_0 = _mm256_set1_epi32(0x30303030);\
^
I get a lot of errors that are very similar to the one above, all of them have the same error message but different locations in the file where they occur, for reference I am on the commit hash 68701167a1020b0b4c47b76e31d3a3da9e2faf3f for the Boost.Log submodule as fetched from the github repo (https://github.com/boostorg/boost)
Does anyone know how I can go about resolving this issue? I am building with a C++14 compiler and this is what I get when I type g++ --version
Apple LLVM version 8.0.0 (clang-800.0.42.1)
Thanks!
Note I should clarify that in this context it is required that I compile this library separately.
Note There seem to be two related source files dump_ssse3.cpp and the mentioned dump_avx2.cpp file, do I have to compile only one of them? I cannot make out what to do from the Jamfile in the build folder :(
That looks like a bug in clang (LLVM). First, the intrinsic belongs to AVX2, not SSE4.2. Second, the whole dump_avx2.cpp file is compiled with -mavx2, so the required extensions are enabled. You can see the compiler switches in the error message from b2. And no, both dump_ssse3.cpp and dump_avx2.cpp should be compiled. The library does runtime detection of the available instructions in the CPU and selects the proper implementation.
I am wrapping a small c++ program in R by using Rcpp, and I checked beforehand that the c++ code is compiling directly with g++ 4.8.4 without warnings or errors. There are no external librairies, only STL is used.
When I compile my package in RStudio with devtools, I obtain the following error:
Updating PerseusR documentation
Loading PerseusR
Error in dyn.load(dllfile) :
unable to load shared object '/home/leonid/Documents/Programmation/PerseusR project/PerseusR/src/PerseusR.so':
/home/leonid/Documents/Programmation/PerseusR project/PerseusR/src/PerseusR.so: undefined symbol: _Z9lexicoPoslllRSt6vectorIlSaIlEE
Calls: suppressPackageStartupMessages ... -> load_all -> load_dll -> library.dynam2 -> dyn.load
Execution halted
Exited with status 1.
It seems that the compilation is fine and there is a problem with the loading of some dynamic libraries.
In the undefined symbol, lexicoPos is the name of a function in the c++ code.
Any ideas on how to solve this problem?
If your home-grown attempt fails, I suggest you start with a created example: Call Rcpp.package.skeleton() and compare all the files it creates with what you have.
Maybe you forgot the required line in NAMESPACE, maybe it is something -- we cannot tell from the information you supplied.
I sucessfully ran the sample codes in the package. Then I copied code from sample1 into another file of mine and set it up to compile using Makefile.
Also copied sample copies into the same directory.
The samples in the directory compile and run fine.
But using R in my already existing code is giving issues. When compiling it gives an error saying expected unqualified-id before âreturnâ. This happens in the line where I declare RInside R(argc, argv).
Another weird thing i noticed is if i include at the bottom of included files, I get a bunch of errors in Rcpp etc. but if i include it at the top, all those errors disappear.
Also, is the default compile option of -O3 required for the package? I have been using -Ofast for most of my codes. Browsing through the questions here I think I need to make changes to CXXFLAGS in Makevars but i can't find out where.
Any help appreciated.
I have boiled down the errors to another file included in my setup which is "k.h". This is a file which is used to interface c++ with kdb+ database. If I include the file before I get errors in Rcpp classes. When included after RInside, I get the earlier error of unqualified id before return.
This is the file in question: k.h
Resolved: It appears it was a variable name conflict. In all examples we have RInside R(argc, argv). As soon as I changed it to RInside L(argc, argv) everything worked fine. Don't know exactly why this was the case but it solves the problem at least. Tested outputs too.