How do I fix this dependency issue in Clojure? - clojure

I'm having a lot of trouble fixing an issue where the dependencies for two different packages are colliding. My project.clj's dependencies look like this:
:dependencies [[org.clojure/clojure "1.6.0"]
[itsy "0.1.1"]
[amazonica "0.3.22" :exclusions [commons-logging org.apache.httpcomponents/httpclient com.fasterxml.jackson.core/jackson-core]]])
My namespace looks like this:
(ns crawler.core
(:require [itsy.core :refer :all])
(:require [itsy.extract :refer :all])
(:use [amazonica.core]
[amazonica.aws.s3]))
When I try to load the namespace into lein's repl with (load crawler/core), I get this error:
CompilerException java.lang.NoSuchMethodError: com.fasterxml.jackson.core.JsonFactory.requiresPropertyOrdering()Z, compiling:(amazonica/core.clj:1:1)
Online sources suggest that this is a dependency mismatch. How do I fix it?

I put the exclusion on itsy rather than amazonica and it worked. Also fixed the NS form in core.clj.
project.clj:
(defproject blabla "0.1.0-SNAPSHOT"
:description "FIXME: write description"
:url "http://example.com/FIXME"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:dependencies [[org.clojure/clojure "1.6.0"]
[itsy "0.1.1" :exclusions [com.fasterxml.jackson.core/jackson-core]]
[amazonica "0.3.22" :exclusions [commons-logging org.apache.httpcomponents/httpclient]]])
core.clj:
(ns blabla.core
(:require [itsy.core :refer :all]
[itsy.extract :refer :all]
[amazonica.core :refer :all]
[amazonica.aws.s3 :refer :all]))
(defn foo
"I don't do a whole lot."
[x]
(println x "Hello, World!"))
to deal with these situatuions in general run
lein deps :tree
and add exclusions until only the newest versions remain.

Related

Adding dependencies to clojure projects using lein

Despite adding the desired dependency to my project.clj file,
(defproject word-tree "0.1.0-SNAPSHOT"
:description "FIXME: write description"
:url "http://example.com/FIXME"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:dependencies [[org.clojure/clojure "1.10.1"]
[org.clojure/clojurescript "1.10.520"]
[clojure-opennlp "0.5.0"] ; <----------------------here
[reagent "0.8.1"]]
...
I am unable to access the functions that the dependency provides.
After referencing the namespace in one of my files,
(ns word-tree.suffix-tree
(:require [clojure.string :as str]
[opennlp.nlp :as nlp])) ; <-----this is the namespace of the dependency
I get this error:
No such namespace: opennlp.nlp, could not locate opennlp/nlp.cljs, opennlp/nlp.cljc, or JavaScript source providing "opennlp.nlp"
The weirdest part is that when I run lein deps :tree the dependency shows up!
$ lein deps :tree
...
[cider/piggieback "0.4.1" :scope "test"]
[cljfmt "0.5.7"]
[rewrite-clj "0.5.2"]
[rewrite-cljs "0.4.3"]
[clojure-complete "0.2.5" :exclusions [[org.clojure/clojure]]]
[clojure-opennlp "0.5.0"] <------------------------------------------------here!!!
[instaparse "1.4.9"]
[org.apache.opennlp/opennlp-tools "1.9.0"]
[figwheel-sidecar "0.5.19" :scope "test"]
...
For my project I really want to use this dependency but it's not working. Any advice would be most welcome. Thanks.
It seems to me the problem is that the library is for Clojure on the JVM only, and you are trying to use it on a ClojureScript project.
No such namespace: opennlp.nlp, could not locate opennlp/nlp.cljs, opennlp/nlp.cljc, or JavaScript source providing "opennlp.nlp"
The compiler tried to look for ClojureScript code (extension .cljs) or compatible with both Clojure and ClojureScript (extension .cljc) or plain JavaScript, but found none.

Why can't I require a Java library in my Clojure file?

I've gotten leiningen to find a library I have in a corporate Artifactory repository, and it seems to download it just fine, but when I open try to require it, running the code with lein run comes back with a FileNotFoundException.
My project file looks like this:
(defproject clj-test "0.1.0-SNAPSHOT"
:description "FIXME: write description"
:url "http://example.com/FIXME"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:dependencies [[org.clojure/clojure "1.8.0"]
[com.ourgroup/library "1.0.0"]]
:repositories [["releases" {:url "https://url-to-our-repo"
:username "username"
:password "password"}]]
:main ^:skip-aot clj-test.core
:target-path "target/%s"
:profiles {:uberjar {:aot :all}})
My single code file looks like this:
(ns clj-test.core
(:gen-class)
(:require [library :as lib]))
(defn -main
"I don't do a whole lot ... yet."
[& args]
(println "And now for something completely different..."))
You need to import a class. To get the name of the class take a look inside the jar (or at the Java source code) and find the Java package and class that make up the fully qualified class name that you need to import.
I've edited this. My earlier mistake has been corrected with the comment: "You require namespaces; you import classes. Requiring a class is no good". So for Java interop you need to import classes, the same as you would be doing if you were writing a Java source file.

Could not locate clojure/data/xml__init.class in a luminus project

In my luminus project I've added this:
[org.clojure/data.zip "0.1.2"]
to the list of dependencies but this throws an exception still:
(ns myapp.rss
(:use [clojure.data.xml :as xml :only [emit]]))
which is:
Could not locate clojure/data/xml__init.class or clojure/data/xml.clj on classpath
here is a working example to compare with:
project.clj:
(defproject hello "0.1.0-SNAPSHOT"
:description "FIXME: write description"
:url "http://example.com/FIXME"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:main hello.core
:dependencies [[org.clojure/clojure "1.7.0"]
[org.clojure/data.xml "0.0.8"]
[org.clojure/data.zip "0.1.2"]
[clj-http "2.2.0"]])
from core.clj:
(ns hello.core
(:require [clj-http.client :as http-client]
[clojure.zip :as zip]
[clojure.xml :as xml]
[clojure.data.xml :as xml-data :refer [emit]]
[clojure.data.zip.xml :as xml-z]))
(use ... :only) has been deprecated by the require :refer pattern.
And here are some common things to check:
you have actually fetched the dependencies since adding them to the project.clj file
Try running lein deps from the command line to make sure fetching the dependencies worked
restart cider (if in emacs)
try from lein repl
if none of this works look in ~/.m2/repository and make sure the class files are there
run ps -ef (if in linux) to look at the command used to start java and make sure the classpath contains your dependency.

Can't build a jar using Leiningen

I'm trying to make a stand alone jar from my bare-bones Clojure project using the Leiningen plugin in Intellij's Cursive.
To create the project, I just created the project.clj file, opened it, and Cursive offered to import it as a project.
project.clj:
(defproject WaterTimer "1"
:description "A timer that reminds you to drink water"
:main tone-producer/main)
tone-producer.clj:
(ns tone-producer
(:require [general-helpers :as g])
(:import [javax.sound.midi MidiSystem
Synthesizer
MidiChannel])
(:gen-class))
(defn main [& args]
(println "Test!"))
When I run the "uberjar" task, I get the following output:
Warning: specified :main without including it in :aot.
Implicit AOT of :main will be removed in Leiningen 3.0.0.
If you only need AOT for your uberjar, consider adding :aot :all into your
:uberjar profile instead.
Warning: The Main-Class specified does not exist within the jar. It may not be executable as expected. A gen-class directive may be missing in the namespace which contains the main method.
Created C:\Users\slomi\IdeaProjects\WaterTimer\target\WaterTimer-1.jar
Created C:\Users\slomi\IdeaProjects\WaterTimer\target\WaterTimer-1-standalone.jar
I also tried changing the main function to have the default name, and omit the name from the defproject:
(defproject WaterTimer "1"
:description "A timer that reminds you to drink water"
:main tone-producer)
(ns tone-producer
(:require [general-helpers :as g])
(:import [javax.sound.midi MidiSystem
Synthesizer
MidiChannel])
(:gen-class))
(defn -main [& args]
(println "Test!"))
But now I get the error:
Error: Could not find or load main class clojure.main
Compilation failed: Subprocess failed
The structure is:
WaterTimer
src
tone-producer.clj
project.clj
target
Any guidance here would be appreciated.
After a bit of fiddling
I dropped (:require [general-helpers :as g]) since its not necessary to demostrate the issue
Error: Could not find or load main class clojure.main Compilation failed
you didn't include the clojure dependency [1]
:gen-class needs AOT - as Sanchayan pointed out
see [2]
project.clj
(defproject WaterTimer "0.0.1"
:description "A timer that reminds you to drink water"
:dependencies [[org.clojure/clojure "1.8.0"]] ;; <- [1]
:main tone-producer
:aot [tone-producer]) ;; <- [2]
src/tone_producer.clj - USE '_' instead of '-' in the filename
(ns tone-producer
(:import [javax.sound.midi MidiSystem
Synthesizer
MidiChannel])
(:gen-class))
(defn -main [& args]
(println "Test!"))
Result:
$ lein uberjar
Compiling tone-producer
Compiling tone-producer
Created .../watertimer/target/WaterTimer-0.0.1.jar
Created .../watertimer/target/WaterTimer-0.0.1-standalone.jar
$ java -jar target/WaterTimer-0.0.1-standalone.jar
Test!
Generally I'd recommend to init a project with lein new <name> via command line and the import it into Cursive/Other IDE of choice.
For creating uberjars, the project file should have the :aot keyword enabling ahead of time compilation.
Here is an output from my project.clj file.
(defproject jdbc "0.1.0-SNAPSHOT"
:description "JDBC Project"
:url "http://example.com/FIXME"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:dependencies [[org.clojure/clojure "1.8.0"]
[org.clojure/java.jdbc "0.6.1"]
[postgresql "9.3-1102.jdbc41"]
[com.mchange/c3p0 "0.9.5.2"]
[byte-streams "0.2.2"]]
:main jdbc.core
:aot [jdbc.core])
Note the :main and :aot entries. Also it needs to be -main as already stated by birdspider.

Clojure "already refers to" exception for Hiccup's with-base-url

I am going through Liberator's Getting Started guide. At the very beginning, when trying to evaluate the above namespace declaration
(ns restserver.core
(:require [liberator.core :refer [resource defresource]]
[ring.middleware.params :refer [wrap-params]]
[compojure.core :refer [defroutes ANY]]))
i get
;!!CompilerException java.lang.IllegalStateException: with-base-url already refers to: #'hiccup.core/with-base-url in namespace: hiccup.page, compiling:(hiccup/page.clj:1:1)
List of declared dependencies in project.clj looks like this:
:dependencies [[org.clojure/clojure "1.7.0"]
[liberator "0.13"]
[compojure "1.4.0"]
[org.apache.storm/storm-core "0.9.5"]
[org.clojure/data.json "0.2.6"]
[ring "1.4.0"]]
It seems that storm-core dependency is causing this issue, as when i remove it, the problem is gone. How can i fix this problem? (apart from moving Storm-related code to a separate library)?
UPDATE: there is an issue on Storm project JIRA posted for exactly this problem.
Try excluding hiccup from the storm-core by providing exclusions on project.clj:
:dependencies [[org.clojure/clojure "1.7.0"]
[liberator "0.13"]
[compojure "1.4.0"]
[org.apache.storm/storm-core "0.9.5" :exclusions [hiccup]]
[org.clojure/data.json "0.2.6"]
[ring "1.4.0"]]