I need please help with a script with a regex to fix a big text file under linux (with sed for example). My records looks like:
1373350|Doe, John|John|Doe|||B|Acme corp|...
1323350|Simpson, Homer|Homer|Simpson|||3|Moe corp|...
I need to validate if the 7th column has a unique character (maybe a letter or number) and if true, add the second column without the comma, i mean:
1373350|Doe, John|John|Doe|||B Doe John|Acme corp|...
1323350|Simpson, Homer|Homer|Simpson|||3 Simpson Homer|Moe corp|...
Any help? Thanks!
Awk is better suited for this job:
awk -F '|' 'BEGIN { OFS = FS } length($7) == 1 { x = $2; sub(/,/, "", x); $7 = $7 " " x } 1' filename
That is:
BEGIN { OFS = FS } # output separated the same way as the input
length($7) == 1 { # if the 7th field is one character long
x = $2 # make a copy of the second field
sub(/,/, "", x) # remove comma from it
$7 = $7 " " x # append it to seventh field
}
1 # print line
Related
I have to create a shellscript that indexes a book (text file) by taking any words that are encapsulated in angled brackets (<>) and making an index file out of that. I have two questions that hopefully you can help me with!
The first is how to identify the words in the text that are encapsulated within angled brackets.
I found a similar question that was asked but required words inside of square brackets and tried to manipulate their code but am getting an error.
grep -on \\<.*> index.txt
The original code was the same but with square brackets instead of the angled brackets and now I am receiving an error saying:
line 5: .*: ambiguous redirect
This has been answered
I also now need to take my index and reformat it like so, from:
1:big
3:big
9:big
2:but
4:sun
6:sun
7:sun
8:sun
Into:
big: 1 3 9
but: 2
sun: 4 6 7 8
I know that I can flip the columns with an awk command like:
awk -F':' 'BEGIN{OFS=":";} {print $2,$1;}' index.txt
But am not sure how to group the same words into a single line.
Thanks!
Could you please try following(if you are not worried about sorting order, in case you need to sort it then append sort to following code).
awk '
BEGIN{
FS=":"
}
{
name[$2]=($2 in name?name[$2] OFS:"")$1
}
END{
for(key in name){
print key": "name[key]
}
}
' Input_file
Explanation: Adding detailed explanation for above code.
awk ' ##Starting awk program from here.
BEGIN{ ##Starting BEGIN section from here.
FS=":" ##Setting field separator as : here.
}
{
name[$2]=($2 in name?name[$2] OFS:"")$1 ##Creating array named name with index of $2 and value of $1 which is keep appending to its same index value.
}
END{ ##Starting END block of this code here.
for(key in name){ ##Traversing through name array here.
print key": "name[key] ##Printing key colon and array name value with index key
}
}
' Input_file ##Mentioning Input_file name here.
If you want to extract multiple occurrences of substrings in between angle brackets with GNU grep, you may consider a PCRE regex based solution like
grep -oPn '<\K[^<>]+(?=>)' index.txt
The PCRE engine is enabled with the -P option and the pattern matches:
< - an open angle bracket
\K - a match reset operator that discards all text matched so far
[^<>]+ - 1 or more (due to the + quantifier) occurrences of any char but < and > (see the [^<>] bracket expression)
(?=>) - a positive lookahead that requires (but does not consume) a > char immediately to the right of the current location.
Something like this might be what you need, it outputs the paragraph number, line number within the paragraph, and character position within the line for every occurrence of each target word:
$ cat book.txt
Wee, <sleeket>, cowran, tim’rous beastie,
O, what a panic’s in <thy> breastie!
Thou need na start <awa> sae hasty,
Wi’ bickerin brattle!
I wad be laith to rin an’ chase <thee>
Wi’ murd’ring pattle!
I’m <truly> sorry Man’s dominion
Has broken Nature’s social union,
An’ justifies that ill opinion,
Which makes <thee> startle,
At me, <thy> poor, earth-born companion,
An’ fellow-mortal!
.
$ cat tst.awk
BEGIN { RS=""; FS="\n"; OFS="\t" }
{
for (lineNr=1; lineNr<=NF; lineNr++) {
line = $lineNr
idx = 1
while ( match( substr(line,idx), /<[^<>]+>/ ) ) {
word = substr(line,idx+RSTART,RLENGTH-2)
locs[word] = (word in locs ? locs[word] OFS : "") NR ":" lineNr ":" idx + RSTART
idx += (RSTART + RLENGTH)
}
}
}
END {
for (word in locs) {
print word, locs[word]
}
}
.
$ awk -f tst.awk book.txt | sort
awa 1:3:21
sleeket 1:1:7
thee 1:5:34 2:4:24
thy 1:2:23 2:5:9
truly 2:1:6
Sample input courtesy of Rabbie Burns
GNU datamash is a handy tool for working on groups of columnar data (Plus some sed to massage its output into the right format):
$ grep -oPn '<\K[^<>]+(?=>)' index.txt | datamash -st: -g2 collapse 1 | sed 's/:/: /; s/,/ /g'
big: 1 3 9
but: 2
sun: 4 6 7 8
To transform
index.txt
1:big
3:big
9:big
2:but
4:sun
6:sun
7:sun
8:sun
into:
big: 1 3 9
but: 2
sun: 4 6 7 8
you can try this AWK program:
awk -F: '{ if (entries[$2]) {entries[$2] = entries[$2] " " $1} else {entries[$2] = $2 ": " $1} }
END { for (entry in entries) print entries[entry] }' index.txt | sort
Shorter version of the same suggested by RavinderSingh13:
awk -F: '{
{ entries[$2] = ($2 in entries ? entries[$2] " " $1 : $2 ": " $1 }
END { for (entry in entries) print entries[entry] }' index.txt | sort
I have a file like this:
a,b,c,"hello, hi",d
I want the field separator to be not space, comma, not space.
Currently I have
cat file | awk 'BEGIN { FS = "[^ ],[^ ]" } ; { print $4 }'
which should give "hello, hi" but it returns nothing. I'm quite new to this regular expression thing so any help would be appreciated.
Eh, no it should not give hello, hi. What actually happens is:
a,b,c,"hello, hi",d
|| ||| || ||_|Third fied separator
|| ||| ||_______|
|| ||| | $3
|| |||_|
|| || Second field separator
|| ||
|| |+- $2 is a comma
||_|
| First field separator
|
+- $0 is empty
So after the third field separator, the line is empty. You can verify this behaviour with
aaa,baa,caa,"hello, hi",daa
as input-file.
If you work with CSV files regularly, consider installing the csvtool, then you can simply say:
echo 'a,b,c,"hello, hi",d' | csvtool col 4 -
and it will spit out
"hello, hi"
You can also use sed:
>sed 's/.*\("[^"]*"\).*/\1/' <<< 'a,b,c,"hello, hi",d'
"hello, hi"
or grep:
>grep -o '"[^"]*"' <<< 'a,b,c,"hello, hi",d'
"hello, hi"
solution is to define the field content instead of field separator. You need to use gawk because standard awk does not have this feature natively. (on linux, awk = gawk)
echo 'a,b,c,"hello, hi",d' \
| awk '
# define the content with FPAT
# here any non , or a encapsulate quoted content
BEGIN{ FPAT = "[^,]*|\"[^\"]*\"" }
# for showing each field
{for (i=1;i<=NF;i++) printf( "field %d: %s\n", i, $i)}
'
field 1: a
field 2: b
field 3: c
field 4: "hello, hi"
field 5: d
By default, regex matching try to always take the longest possible so a "..,..." is longer than ".. and/or ..." taking full quoted string instead of partial coma separated content of the same string
I have an input CSV file:
1,5,1
1,6,2
1,5,3
1,7,4
1,5,5
1,6,6
1,6,7
I need to create a string out of this as follows:
;5,1,3,5;6,2,6,7;7,4
So each character, except the first which is the value of the field $2, in the substring in between the ; denotes the row number of middle field; for example ;5,1,3,5 means that 5 is at row number 1,3,5.
I've been trying to use awk with gsub, trying to create the string MYSTR dynamically.
The regex inside the gsub is not working. I need a regex that will match ;$3 (the value of $3, which can be a two digit number) and replace it with ;$3,RowNO, if the pattern is not matched then add ;$3 at the end of the string.
This is what I have so far:
awk -F',' '{
print NR, $3;
noofchars=gsub(/;$3/,";"$3","NR,MYSTR);
print noofchars;
if ( noofchars == 1 )
;
else
MYSTR=MYSTR";"$3","NR;
print NR, $3;
print MYSTR;
}
END{print MYSTR;}' $1
The regex doesn't work because $3 isn't interpreted as the field #3 value but is seen as the anchor $ (that matches the end of the line) and a literal 3.
You can do it without gsub:
awk -F, '{a[$2]=a[$2]","NR}END{for (i in a){printf(";%d%s",i,a[i])}}'
Input
$ cat file
1,5,1
1,6,2
1,5,3
1,7,4
1,5,5
1,6,6
1,6,7
Output
$ awk -F, '{gsub(/[ ]+/,"",$3);a[$2] = ($2 in a ? a[$2]:$2) FS $3 }END{for(i in a)printf("%s%s",";",a[i]); print ""}' file
;5,1,3,5;6,2,6,7;7,4
Better Readable version
awk -F, '
{
gsub(/[ ]+/,"",$3); # suppress space char in third field
a[$2] = ($2 in a ? a[$2]:$2) FS $3 # array a where index being field2 and value will be field3, if index exists before append string with existing value
}
END{
for(i in a) # loop through array a and print values
printf("%s%s",";",a[i]);
print ""
}
' file
#vsshekhar: Try following too: It will provide you values in the correct same order which Input_file ($2) are coming.
awk -F, '{A[++i]=$2;B[A[i]]=B[A[i]]?B[A[i]] "," FNR:FNR} END{for(j=1;j<=i;j++){if(B[A[j]]){printf(";%s,%s",A[j],B[A[j]]);delete B[A[j]]}};print ""}' Input_file
Adding a non-one liner form of solution too now.
awk -F, '{
A[++i]=$2;
B[A[i]]=B[A[i]]?B[A[i]] "," FNR:FNR
}
END{
for(j=1;j<=i;j++){
if(B[A[j]]){
printf(";%s,%s",A[j],B[A[j]]);
delete B[A[j]]
}
};
print ""
}
' Input_file
This line is from a car dataset (https://archive.ics.uci.edu/ml/datasets/Auto+MPG)
looking like this:
15.0 8. 429.0 198.0 4341. 10.0 70. 1. "ford galaxie 500"
how would one replace the multiple whitespace (it has both space and tabs) w/ a single comma, but not inside the quotes, preferably using sed,to turn the dataset into a REAL csv. Thanks!
Do it with awk:
awk -F'"' 'BEGIN { OFS="\"" } { for(i = 1; i <= NF; i += 2) { gsub(/[ \t]+/, ",", $i); } print }' filename.csv
Using " as the field separator, every second field is going to be a part of the line where spaces should be replaced. Then:
BEGIN { OFS = FS } # output should also be separated by "
{
for(i = 1; i <= NF; i += 2) { # in every second field
gsub(/[ \t]+/, ",", $i) # replace spaces with commas
}
print # and print the whole shebang
}
This might work for you (GNU sed):
sed 's/\("[^"]*"\|[0-9.]*\)\s\s*/\1,/g' file
This takes a quoted string or a decimal number followed by white space and replaces the white space by a comma - throughout each and every line.
To be less specific use (as per comments):
sed -r 's/("[^"]*"|\S+)\s+/\1,/g' file
I have the following sentence in awk
$ gawk '$2 == "-" { print $1 }' file
I was wondering what thing this instruction exactly did because I can't parse exactly the words I need.
Edit: How can I do in order to skip the lines before the following astersiks?
Let's say I have the following lines:
text
text
text
* * * * * * *
line1 -
line2 -
And then I want to filter just
line1
line2
with the sentence I posted above...
$ gawk '$2 == "-" { print $1 }' file
Thanks for your time and response!
This will find all lines on which the second column (Separated by spaces) is a -, and will then print the first column.
The first part ($2 == "-") checks for the second column being a -, and then if that is the case, runs the attached {} block, which prints the first column ($0 being the whole line, and $1, $2, etc being the first, second, ... columns.)
Spaces are the separator here simply because they are the default separator in awk.
Edit: To do what you want to do now, try the following (Not the most elegant, but it should work.)
gawk 'BEGIN { p = 0 } { if (p != 0 && $2 == "-") { print $1 } else { p = ($0 == "* * * * * * *")? 1 : 0 } }'
Spread over more lines for clarity on what's happening:
gawk 'BEGIN { p = 0 }
{ if (p != 0 && $2 == "-")
{ print $1 }
else
{ p = ($0 == "* * * * * * *")? 1 : 0 }
}'
Answer to the original question:
If the second column in a line from the file matches the string "-" then it prints out the first column of the line, columns are by default separated by spaces.
This would match and print out one:
one - two three
This would not:
one two three four
Answer to the revised question:
This code should do what you need after the match of the given string:
awk '/\* \* \* \* \* \* \*/{i++}i && $2 == "-" { print $1 }' data2.txt
Testing on this data gives the following output:
2two
2two