How to do below codes in proc sql.
Two proc statement and one merge given below.
proc sort data=new out=new1 nodupkey;
by id;
where roll=100;
run;
proc sort data new2 out =new4 nodupkey
by id;
where roll=100;
run;
data score;
merge new4 (in=a) new1;
by id;
if a;
run;
The merge you show is equivalent to SQL left-join. You want all the rows from "new2" and ignore all the rows from "new" that don't have a common id. The uniqueness of the id (per the pre-sorts) further supports a left-join equivalence.
Proc SQL;
select new.*, new2.*
from new2
left join new on new.id = new2.id
where roll=100
order by id;
quit;
For the scenario of atypical data where there is many:many ids in the merge, the left-join is not equivalent.
I did leave out the NODUPKEY equivalent. Presuming option EQUALS is in effect, the selection of a groups first row would be equivalent. The undocumented MONOTONIC() function can be used to apply a default row order to a sub-query, which can then be used in a by group having expression.
data LEFT;
input id x1 x2 x3;
datalines;
1 1 1 1
1 2 2 2
1 3 3 3
2 1 1 1
2 2 2 2
3 3 3 3
4 4 4 4
5 5 5 5
;
run;
data RIGHT;
input id y1 y2 y3 x1;
datalines;
1 1 1 1 11
2 1 1 1 22
3 1 2 3 4
3 2 3 4 5
3 3 4 5 6
4 1 1 1 44
6 6 6 6 6
;
run;
proc sql;
select
LEFT.id
, coalesce(RIGHT.x1,LEFT.x1) as x1
, LEFT.x2
, LEFT.x3
, RIGHT.y1
, RIGHT.y2
, RIGHT.y3
from
(
select * from (select monotonic() as _seq_, * from LEFT) group by id having _seq_ = min(_seq_)
)
as LEFT
left join
(
select * from (select monotonic() as _seq_, * from RIGHT) group by id having _seq_ = min(_seq_)
)
as RIGHT
on
LEFT.id = RIGHT.id
;
I feel the need to reiterate that SQL left join is not always the same a merge, and SQL does not have common variable 'overlaying' that is implicit in DATA Step. When LEFT and RIGHT collide on non-key variables, you need to select a coalescence of the common variables into a new like-named variable in the output.
I am attempting to group by a variable that is not unique with a discrete variable to get the unique combinations per non-unique variable. For example:
A B
1 a
1 b
2 a
2 a
3 a
4 b
4 d
5 c
5 e
I want:
A Unique_combos
1 a, b
2 a
3 a
4 b, d
5 e
My current attempt is something along the lines of:
proc sql outobs=50;
title 'Unique Combinations of b per a';
select a, b
from mylib.mydata
group by distinct a;
run;
If you are happy to use a data step instead of proc sql you can use the retain keyword combined with first/last processing:
Example data:
data have;
attrib b length=$1 format=$1. informat=$1.;
input a
b $
;
datalines;
1 a
1 b
2 a
2 a
3 a
4 b
4 d
5 c
5 e
;
run;
Eliminate duplicates and make sure the data is sorted for first/last processing:
proc sql noprint;
create table tmp as select distinct a,b from have order by a,b;
quit;
Iterate over the distinct list and concatenate the values of b together:
data want;
length combinations $200; * ADJUST TO BE BIG ENOUGH TO STORE ALL THE COMBINATIONS;
set tmp;
by a;
retain combinations '';
if first.a then do;
combinations = '';
end;
combinations = catx(', ',combinations, b);
if last.a then do;
output;
end;
drop b;
run;
Result:
combinations a
a, b 1
a 2
a 3
b, d 4
c, e 5
You just need to put a distinct keyword in the select clause, eg:
title 'Unique Combinations of b per a';
proc sql outobs=50;
select distinct a, b
from mylib.mydata;
The run statement is unnecessary, the sql procedure is normally ended with a quit - although I personally never use it, as the statement will execute upon hitting the semicolon and the procedure quits anyway upon hitting the next step boundary.
Suppose the data set have contains various outliers which have been identified in an outliers data set. These outliers need to be replaced with missing values, as demonstrated below.
Have
Obs group replicate height weight bp cholesterol
1 1 A 0.406 0.887 0.262 0.683
2 1 B 0.656 0.700 0.083 0.836
3 1 C 0.645 0.711 0.349 0.383
4 1 D 0.115 0.266 666.000 0.015
5 2 A 0.607 0.247 0.644 0.915
6 2 B 0.172 333.000 555.000 0.924
7 2 C 0.680 0.417 0.269 0.499
8 2 D 0.787 0.260 0.610 0.142
9 3 A 0.406 0.099 0.263 111.000
10 3 B 0.981 444.000 0.971 0.894
11 3 C 0.436 0.502 0.563 0.580
12 3 D 0.814 0.959 0.829 0.245
13 4 A 0.488 0.273 0.463 0.784
14 4 B 0.141 0.117 0.674 0.103
15 4 C 0.152 0.935 0.250 0.800
16 4 D 222.000 0.247 0.778 0.941
Want
Obs group replicate height weight bp cholesterol
1 1 A 0.4056 0.8870 0.2615 0.6827
2 1 B 0.6556 0.6995 0.0829 0.8356
3 1 C 0.6445 0.7110 0.3492 0.3826
4 1 D 0.1146 0.2655 . 0.0152
5 2 A 0.6072 0.2474 0.6444 0.9154
6 2 B 0.1720 . . 0.9241
7 2 C 0.6800 0.4166 0.2686 0.4992
8 2 D 0.7874 0.2595 0.6099 0.1418
9 3 A 0.4057 0.0988 0.2632 .
10 3 B 0.9805 . 0.9712 0.8937
11 3 C 0.4358 0.5023 0.5626 0.5799
12 3 D 0.8138 0.9588 0.8293 0.2448
13 4 A 0.4881 0.2731 0.4633 0.7839
14 4 B 0.1413 0.1166 0.6743 0.1032
15 4 C 0.1522 0.9351 0.2504 0.8003
16 4 D . 0.2465 0.7782 0.9412
The "get it done" approach is to manually enter each variable/value combination in a conditional which replaces with missing when true.
data have;
input group replicate $ height weight bp cholesterol;
datalines;
1 A 0.4056 0.8870 0.2615 0.6827
1 B 0.6556 0.6995 0.0829 0.8356
1 C 0.6445 0.7110 0.3492 0.3826
1 D 0.1146 0.2655 666 0.0152
2 A 0.6072 0.2474 0.6444 0.9154
2 B 0.1720 333 555 0.9241
2 C 0.6800 0.4166 0.2686 0.4992
2 D 0.7874 0.2595 0.6099 0.1418
3 A 0.4057 0.0988 0.2632 111
3 B 0.9805 444 0.9712 0.8937
3 C 0.4358 0.5023 0.5626 0.5799
3 D 0.8138 0.9588 0.8293 0.2448
4 A 0.4881 0.2731 0.4633 0.7839
4 B 0.1413 0.1166 0.6743 0.1032
4 C 0.1522 0.9351 0.2504 0.8003
4 D 222 0.2465 0.7782 0.9412
;
run;
data outliers;
input parameter $ 11. group replicate $ measurement;
datalines;
cholesterol 3 A 111
height 4 D 222
weight 2 B 333
weight 3 B 444
bp 2 B 555
bp 1 D 666
;
run;
EDIT: Updated outliers so that parameter avoids truncation and changed measurement to be numeric type so as to match the corresponding height, weight, bp, cholesterol. This shouldn't change the responses.
data want;
set have;
if group = 3 and replicate = 'A' and cholesterol = 111 then cholesterol = .;
if group = 4 and replicate = 'D' and height = 222 then height = .;
if group = 2 and replicate = 'B' and weight = 333 then weight = .;
if group = 3 and replicate = 'B' and weight = 444 then weight = .;
if group = 2 and replicate = 'B' and bp = 555 then bp = .;
if group = 1 and replicate = 'D' and bp = 666 then bp = .;
run;
This, however, doesn't utilize the outliers data set. How can the replacement process be made automatic?
I immediately think of the IN= operator, but that won't work. It's not the entire row which needs to be matched. Perhaps an SQL key matching approach would work? But to match the key, don't I need to use a where statement? I'd then effectively be writing everything out manually again. I could probably create macro variables which contain the various if or where statements, but that seems excessive.
I don't think generating statements is excessive in this case. The complexity arises here because your outlier dataset cannot be merged easily since the parameter values represent variable names in the have dataset. If it is possible to reorient the outliers dataset so you have a 1 to 1 merge, this logic would be simpler.
Let's assume you cannot. There are a few ways to use a variable in a dataset that corresponds to a variable in another.
You could use an array like array params{*} height -- cholesterol; and then use the vname function as you loop through the array to compare to the value in the parameter variable, but this gets complicated in your case because you have a one to many merge, so you would have to retain the replacements and only output the last record for each by group... so it gets complicated.
You could transpose the outliers data using proc transpose, but that will get lengthy because you will need a transpose for each parameter, and then you'd need to merge all the transposed datasets back to the have dataset. My main issue with this method is that code with a bunch of transposes like that gets unwieldy.
You create the macro variable logic you are thinking might be excessive. But compared to the other ways of getting the values of the parameter variable to match up with the variable names in the have dataset, I don't think something like this is excessive:
data _null_;
set outliers;
call symput("outlierstatement"||_n_,"if group = "||group||" and replicate = '"||replicate||"' and "||parameter||" = "||measurement||" then "|| parameter ||" = .;");
call symput("outliercount",_n_);
run;
%macro makewant();
data want;
set have;
%do i = 1 %to &outliercount;
&&outlierstatement&i;
%end;
run;
%mend;
Lorem:
Transposition is the key to a fully automatic programmatic approach. The transposition that will occur is of the filter data, not the original data. The transposed filter data will have fewer rows than the original. As John indicated, transposition of the want data can create a very tall table and has to be transposed back after applying the filters.
As to the the filter data, the presence of a filter row for a specific group, replicate and parameter should be enough to mark a cell for filtering. This is on the presumption that you have a system for automatic outlier detection and the filter values will always be in concordance with the original values.
So, what has to be done to automate the filter application process without code generating a wall of test and assign statements ?
Transpose filter data into same form as want data, call it Filter^
Merge Want and Filter^ by record key (which is the by group of Group and Replicate)
Array process the data elements, looking for filtering conditions.
For your consideration, try the following SAS code. There is an erroneous filter record added to the mix.
data have;
input group replicate $ height weight bp cholesterol;
datalines;
1 A 0.4056 0.8870 0.2615 0.6827
1 B 0.6556 0.6995 0.0829 0.8356
1 C 0.6445 0.7110 0.3492 0.3826
1 D 0.1146 0.2655 666 0.0152
2 A 0.6072 0.2474 0.6444 0.9154
2 B 0.1720 333 555 0.9241
2 C 0.6800 0.4166 0.2686 0.4992
2 D 0.7874 0.2595 0.6099 0.1418
3 A 0.4057 0.0988 0.2632 111
3 B 0.9805 444 0.9712 0.8937
3 C 0.4358 0.5023 0.5626 0.5799
3 D 0.8138 0.9588 0.8293 0.2448
4 A 0.4881 0.2731 0.4633 0.7839
4 B 0.1413 0.1166 0.6743 0.1032
4 C 0.1522 0.9351 0.2504 0.8003
4 D 222 0.2465 0.7782 0.9412
5 E 222 0.2465 0.7782 0.9412 /* test record for filter value misalignment test */
;
run;
data outliers;
length parameter $32; %* <--- widened parameter so it can transposed into column via id;
input parameter $ group replicate $ measurement ; %* <--- changed measurement to numeric variable;
datalines;
cholesterol 3 A 111
height 4 D 222
height 5 E 223 /* test record for filter value misalignment test */
weight 2 B 333
weight 3 B 444
bp 2 B 555
bp 1 D 666
;
run;
data want;
set have;
if group = 3 and replicate = 'A' and cholesterol = 111 then cholesterol = .;
if group = 4 and replicate = 'D' and height = 222 then height = .;
if group = 2 and replicate = 'B' and weight = 333 then weight = .;
if group = 3 and replicate = 'B' and weight = 444 then weight = .;
if group = 2 and replicate = 'B' and bp = 555 then bp = .;
if group = 1 and replicate = 'D' and bp = 666 then bp = .;
run;
/* Create a view with 1st row having all the filtered parameters
* This is necessary so that the first transposed filter row
* will have the parameters as columns in alphabetic order;
*/
proc sql noprint;
create view outliers_transpose_ready as
select distinct parameter from outliers
union
select * from outliers
order by group, replicate, parameter
;
/* Generate a alphabetic ordered list of parameters for use
* as a variable (aka column) list in the filter application step */
select distinct parameter
into :parameters separated by ' '
from outliers
order by parameter
;
quit;
%put NOTE: &=parameters;
/* tranpose the filter data
* The ID statement pivots row data into column names.
* The prefix=_filter_ ensure the new column names
* will not collide with the original data, and can be
* the shortcut listed with _filter_: in an array statement.
*/
proc transpose data=outliers_transpose_ready out=outliers_apply_ready prefix=_filter_;
by group replicate notsorted;
id parameter;
var measurement;
run;
/* Robust production code should contain a bin for
* data that does not conform to the filter application conditions
*/
data
want2(label="Outlier filtering applied" drop=_i_ _filter_:)
want2_warnings(label="Outlier filtering: misaligned values")
;
merge have outliers_apply_ready(keep=group replicate _filter_:);
by group replicate;
/* The arrays are for like named columns
* due to the alphabetic ordering enforced in data and codegen preparation
*/
array value_filter_check _filter_:;
array value ¶meters;
if group ne .;
do _i_ = 1 to dim(value);
if value(_i_) EQ value_filter_check(_i_) then
value(_i_) = .;
else
if not missing(value_filter_check(_i_)) AND
value(_i_) NE value_filter_check(_i_)
then do;
put 'WARNING: Filtering expected but values do not match. ' group= replicate= value(_i_)= value_filter_check(_i_)=;
output want2_warnings;
end;
end;
output want2;
run;
Confirm your want and automated want2 agree.
proc compare noprint data=want compare=want2 outnoequal out=diffs;
by group replicate;
run;
Enjoy your SAS
You could use a hash table. Load a hash table with the outlier dataset, with parameter-group-replicate defined as the key. Then read in the data, and as you read each record, check each of the variables to see if that combination of parameter-group-replicate can be found in the hash table. I think below works (I'm no hash expert):
data want;
if 0 then set outliers (keep=parameter group replicate);
if _N_ = 1 then
do;
declare hash h(dataset:'outliers') ;
h.defineKey('parameter', 'group', 'replicate') ;
h.defineDone() ;
end;
set have ;
array vars {*} height weight bp cholesterol ;
do i=1 to dim(vars);
parameter=vname(vars{i});
if h.check()=0 then call missing(vars{i});
end;
drop i parameter;
run;
I like #John's suggestion:
You could use an array like array params{*} height -- cholesterol; and
then use the vname function as you loop through the array to compare
to the value in the parameter variable, but this gets complicated in
your case because you have a one to many merge, so you would have to
retain the replacements and only output the last record for each by
group... so it gets complicated.
Generally in a one to many merge I would avoid recoding variables from the dataset that is unique, because variables are retained within BY groups. But in this case, it works out well.
proc sort data=outliers;
by group replicate;
run;
data want (keep=group replicate height weight bp cholesterol);
merge have (in=a)
outliers (keep=group replicate parameter in=b)
;
by group replicate;
array vars {*} height weight bp cholesterol ;
do i=1 to dim(vars);
if vname(vars{i})=parameter then call missing(vars{i});
end;
if last.replicate;
run;
Thank you #John for providing a proof of concept. My implementation is a little different and I think worth making a separate entry for posterity. I went with a macro variable approach because I feel it is the most intuitive, being a simple text replacement. However, since a macro variable can contain only 65534 characters, it is conceivable that there could be sufficient outliers to exceed this limit. In such a case, any of the other solutions would make fine alternatives. Note that it is important that the put statement use something like best32. Too short a width will truncate the value.
If you desire to have a dataset containing the if statements (perhaps for verification), simply remove the into : statement and place a create table statements as line at the beginning of the PROC SQL step.
data have;
input group replicate $ height weight bp cholesterol;
datalines;
1 A 0.4056 0.8870 0.2615 0.6827
1 B 0.6556 0.6995 0.0829 0.8356
1 C 0.6445 0.7110 0.3492 0.3826
1 D 0.1146 0.2655 666 0.0152
2 A 0.6072 0.2474 0.6444 0.9154
2 B 0.1720 333 555 0.9241
2 C 0.6800 0.4166 0.2686 0.4992
2 D 0.7874 0.2595 0.6099 0.1418
3 A 0.4057 0.0988 0.2632 111
3 B 0.9805 444 0.9712 0.8937
3 C 0.4358 0.5023 0.5626 0.5799
3 D 0.8138 0.9588 0.8293 0.2448
4 A 0.4881 0.2731 0.4633 0.7839
4 B 0.1413 0.1166 0.6743 0.1032
4 C 0.1522 0.9351 0.2504 0.8003
4 D 222 0.2465 0.7782 0.9412
;
run;
data outliers;
input parameter $ 11. group replicate $ measurement;
datalines;
cholesterol 3 A 111
height 4 D 222
weight 2 B 333
weight 3 B 444
bp 2 B 555
bp 1 D 666
;
run;
proc sql noprint;
select
cat('if group = '
, strip(put(group, best32.))
, " and replicate = '"
, strip(replicate)
, "' and "
, strip(parameter)
, ' = '
, strip(put(measurement, best32.))
, ' then '
, strip(parameter)
, ' = . ;')
into : listIfs separated by ' '
from outliers
;
quit;
%put %quote(&listIfs);
data want;
set have;
&listIfs;
run;
I have 2 tables as followings:
Table 1
data table1;
input id $ value;
datalines;
A 1
A 2
B 1
B 2
C 1
D 1
;
Table 2
data table2;
input id $ value;
datalines;
A 1
B 2
C 1
D 1
E 1
;
As you may observed that the unique id for table 1 is A, B, C, D.
I would like to delete observations those id in table2 do not appear in table1.
Therefore last observation of table2 should be deleted as E not in {A, B, C, D}
Desired output:
A 1
B 2
C 1
D 1
You can do this with proc sql:
proc sql;
delete from table2
where not exists (select 1 from table1 where table1.id = table2.id);
I have two datasets of the following structure
ID1 Cat1
1 a
2 a
3 b
5 b
5 b
6 c
7 d
and
ID2 Cat2
11 z
12 z
13 z
14 y
15 x
I want to column-combine then and then have the unmatched rows just be missing. So ultimately I want:
ID1 Cat1 ID2 Cat2
1 a 11 z
2 a 12 z
3 b 13 z
4 b 14 y
5 b 15 x
6 c
7 d
The purpose of this is that I have two sorted datasets (by ID) and want to do a matching of the first category (Cat1) with the second (Cat2). The second category has a predefined number of "slots" and those slots should be matched on the order of the IDs. The only relationship between ID1 and ID2 is that they are ordered the same way. So the two lowest should be a match and so on.
You want a one to one merge.
The documentation is here
In order to do a one to one merge you just need to merge without a by statement
This type of merge simply matches the observations based on its row number, so be careful, it may give you unintended results if you are missing a row you thought you had or something else wasn't as you expected.
for example:
proc sort data = have1; run;
proc sort data = have2; run;
data want;
merge have1 have2;
run;