I'm trying to come up with some sensible solution for a build written using SCons, which relies on quite a lot of applications to be accessible in a Unix-like way, using Unix-like paths etc. However, when I'm trying to use SCons plugin, or Git plugin in Jenkins, it tries to invoke the plugins using something like cmd /c git.exe - and this will certainly fail, because Git was installed using Cygwin and is only known in Cygwin shell, but not in CMD. But even if I could make git and the rest available to cmd.exe, other problems arise: the Cygwin version of Git expects paths to have forward slashes and treats backward slashes as escape characters. Idiotic Windows file-system related issues kick in too (I can't give Jenkins permissions to delete my own files!).
So, is there a way to somehow make Jenkins only use Cygwin shell, and never cmd.exe? Or should I be prepared to run some Linux in a VM to have this handled?
You could configure Jenkins to execute the cygwin command with the specific shell command, as follows:
c:\cygwin\bin\mintty --hold always --exec /cygdrive/c/path/to/bash/script.sh
Where script.sh will execute all the commands needed for the Jenkins execution.
Just for the record here's what I ended up doing:
Added a user SYSTEM to Cygwin, mkpasswd -u SYSTEM
Edited /etc/passwd by adding the newly created user's home directory to the record. Now it looks something like the below:
SYSTEM:*:18:544:,S-1-5-18:/home/SYSTEM:
Copied my own user's configuration settings such as .netrc, .ssh and so on into the SYSTEM home. Then, from Windows Explorer, through an array of popups I've claimed ownership of all of these files to SYSTEM user. One by one! I love Microsoft!
In Jenkins I now run a wrapper for my build that sets some other environment variables etc. by calling c:\cygwin\bin\bash --login -i /path/to/script/script
Gave it up because of other difficulties in configuration and made Jenkins service run under my user rather then SYSTEM. Here's a blog post on how to do it: http://antagonisticpleiotropy.blogspot.co.il/2012/08/running-jenkins-in-windows-with-regular.html but, basically, you need to open Windows services, then find Jenkins service, select it's properties, go to "Logon" tab and change the user to the "this user".
One way to do this is to start your "execute shell" build steps with
#!c:\cygwin\bin\bash --login
The trick is of course that it resets your current directory so you need to
cd `cygpath $WORKSPACE`
to get back to the workspace.
Adding to thon56's good answer: this is helpful: "set -ex"
#!c:\cygwin\bin\bash --login
cd `cygpath $WORKSPACE`
set -ex
Details:
-e to exit on error. This is important if you want your jobs to fail on error.
-x to echo command to the screen, if desired.
You can also use #!c:\cygwin\bin\bash --login -ex, but that echos a lot of login steps that you most likely don't care to see.
Related
When working with a ColdFusion server you can access the CFIDE/administrator to set config values, which update the cfusion/lib/ xml files (e.g. neo-runtime.xml, neo-mail.xml, etc.)
I'd like to automate a deployment process that includes setting these administrator values so that I don't have to log in and manually set them for each new box that shares settings. I'm unsure of the best way to go about it.
Some thoughts I had are:
Replacing the full files with ones containing my custom settings. I've done this for local development, but it may not be an ideal method due to CF hot-fixes potentially adding/removing/changing attributes.
A script to read the wddx xml file and replace the attribute values. I'm having trouble finding information about how to do this method.
Has anyone done anything like this before? Or does anyone have any recommendations on how to best go about this?
At one company, we checked all the neo-*.xml files into source control, with a set for each environment Devs only had access to the dev settings and we could deploy a local development environment with all the correct settings for new employees quickly.
but it may not be an ideal method due to CF hot-fixes potentially adding/removing/changing attributes.
You have to keep up with those changes and migrate each environment appropriately.
While I was there, we upgraded from 8 to 9, 9 to 11 and from 11 to 2016. Environments would have to be mixed as it took time to verify the applications worked with each new version of CF. Each server got their correct XML files for that environment and scripts would copy updates as needed. We had something like 55 servers in production running 8 instances each, so this scaled well.
There is a very usefull tool developed by Ortus Solutions for this kind of automatizations called cfconfig that can be installed with their commandbox command line utility. This tool isn't only capable of setting configurations of the administrator: It is also capable of exporting/importing settings to a json file (cfconfig.json). It might be what you need.
Here is the link to their docs
https://cfconfig.ortusbooks.com/introduction/getting-started-guide
CFConfig worked perfectly for my needs. I marked #AndreasRu answer as accepted for introducing me to that tool! I'm just adding this response with some additional detail for posterity.
Install CommandBox as part of deployment script
Install CFConfig as part of deployment script
Use CFConfig to export a config.json file from an existing box that will share settings with the new deployment. Store this json file in source control for each type/env of box.
Use CFConfig to import the config.json as part of deployment script
Here's a simple example of what this looks like on debian
# Installs CommandBox
curl -fsSl https://downloads.ortussolutions.com/debs/gpg | apt-key add -
echo "deb https://downloads.ortussolutions.com/debs/noarch /" | tee -a /etc/apt/sources.list.d/commandbox.list
apt-get update && apt-get install apt-transport-https commandbox
# Installs CFConfig module
box install commandbox-cfconfig
# Import config settings
box cfconfig import from=/<path-to-config>/config.json to=/opt/ColdFusion/cfusion/ toFormat=adobe#11.0.19
I am migrating a Django application from Openshift v2 to v3 (In case you don't know, RedHat is shutting down v2 on September 30th, see: https://blog.openshift.com/migrate-to-v3-v2-eol/)
So, I am following this blog post to help me: https://blog.openshift.com/migrating-django-applications-openshift-3/ . I am new to all these Docker / Kubernetes concepts the new version is build upon.
I was able to make some progress : I managed to get a successful build of my app. Yet it crashes at deployment time:
---> Running application from script (app.sh) ...
/usr/libexec/s2i/run: line 42: /opt/app-root/src/app.sh: Permission denied
Indeed, app.sh has lost its x permission. I log into the failing container as debug and see it:
> oc debug dc/<my app>
> (app-root)sh-4.2$ ls -l /opt/app-root/src/app.sh
-rw-rw-r--. 1 default root 127 Sep 6 21:20 /opt/app-root/src/app.sh
The blog posts states "Ensure that the app.sh file is executable by running chmod +x app.sh.", which I did on my local repo. Whatever, I want to do it again directly in the pod, but it doesn't work:
(app-root)sh-4.2$ chmod +x /opt/app-root/src/app.sh
chmod: changing permissions of ‘/opt/app-root/src/app.sh’: Operation not permitted
So, how can I set the x permission to app.sh ? Thank you
Without looking into more details, any S2I builder image will gladly use your custom supplied run script to start the application in an alternative way.
Create .s2i/bin/ (mind the dot) in your source code directory, place the run script into it and rebuild the app in OpenShift - it will automatically use your custom run script upon deployment.
This is the preferred way of starting applications using custom commands in OpenShift.
Regarding your immediate problem, there is a very simple reason why you can not change the permissions of the script: you were trying to modify the permissions in the deployed pod, and not the builder pod. Deployed pods run using different UIDs, usually somewhere in the range of 100000000, and definitely do not match the file ownership as generated by the build. Hence permission denied.
The root cause of your problem (app.sh losing executable permissions) must be in the way the build process installs those files, and indeed looking at the /usr/libexec/s2i/assemble script in the base image does seem to reveal the culprit. The last two lines are:
# set permissions for any installed artifacts
fix-permissions /opt/app-root
If you wanted to change this part of the build instead of using a custom run script, I suggest you then create .s2i/bin/assemble in your project's source code and make it look sort of like this:
#!/bin/bash
echo "Running stock build:"
${STI_SCRIPTS_PATH}/assemble
echo "Fixing the mess:"
chmod 755 /opt/app-root/src/app.sh
This will fix whatever the stock build process does to file permissions, and will do it using the same UID as the rest of the build, so file ownership shouldn't be an issue.
as I stumbled upon this issue myself I've found a way to resolve it.
You have to make your file app.sh executable and push it in your repo as such.
If git does not track this modification as it did for me, you have to use: git update-index --chmod=+x app.sh for it to work.
I have a standard Debian 8.9 instance on google cloud compute (GCE) where my startup script is ignored.
In the custom metadata field, for startup-script, I am trying to run an Rscript (which is used for batch execution of R files), followed by a system shutdown, with the following:
#! /bin/bash
sudo /usr/bin/Rscript /home/myuser/launch_script.R
sudo shutdown -h now
Starting the instance is immediately followed by a shutdown and the Rscript is ignored. Removing the last line to shutdown causes the GCE instance to start, but the Rscript to be ignored. Running just "sudo /usr/bin/Rscript /home/myuser/launch_script.R" from the terminal results in the script being run. It has a chmod of 755, so I don't think this is a permissions issue.
In addition to this problem, I have read elsewhere that logging should happen in /var/log/, but there is nothing there. Instead, I have a bunch of log files (that only contain the start-up script and nothing else) in the root of my instance:
I got in touch with Google cloud support, who gave the following response:
script definition is kept under /var/run/google.startup.script
If the script does not run initially, you can force it manually with : $ sudo google_metadata_script_runner --script-type startup # for Debian, or # sudo /usr/share/google/run-startup-scripts # on Ubuntu and older images
I'm posting this information here, because it is not in their documentation (as of August 2017). I'm not sure how helpful it is, since the google.startup.script didn't exist in my case (using the latest Debian image on GCE), but I did run the other commands.
However, I think my main issues were:
I was using autossh to connect to a remote database. The startup-script was running before autossh. Building a 40 second delay into the script and running the script as a user (not sudo-type root) seems to have solved this problem for now. Autossh was being run as the main user, which I think gets loaded before lower-privilege user-defined scripts get loaded.
I was using some gcloud commands from the user account which had its own authentication issues. Running gcloud auth login as the user and ensuring correct permissions on my private key solved this.
Always remember to check the messages and syslog files in /var/log for troubleshooting. This allowed me to see the order of things being loaded at system-boot.
I am stuck at using Amazon EC2 CLI.
I have downloaded the Command Line Tools from
http://aws.amazon.com/developertools/351.
I placed the bin and lib folder into my Amazon project folder: /Users/Invictus/EC2
I downloaded the cert-xxxx.pem and pk-xxx.pem into the same folder.
Created a .bash_profile in the same folder.
I tried to execute ec2-describe-images -o amazon after I moved to cd /Users/Invictus/EC2.
The system does not recognise the command: command not found.
If I try to execute the same command inside the bin folder, the result is the same.
My .bash_profile:
export EC2_HOME=~/.EC2
export PATH=$PATH:$EC2_HOME/bin
export EC2_PRIVATE_KEY=`ls $EC2_HOME/pk-*.pem`
export EC2_CERT=`ls $EC2_HOME/cert-*.pem`
export JAVA_HOME=/System/Library/Frameworks/JavaVM.framework/Home/
Where did I make a mistake?
My aim is to connect to the launched instance and be able to execute commands there from my local machine.
I have Java installed.
The newer AWS Unified CLI Tools is much, much easier to set up. All you need is Python, which comes built-in to every Mac.
Here are a few things I can think of:
Your .bash_profile should be in /Users/Invictus/ , not /Users/Invictus/EC2. Move it to your home directory and log off and log back in (or restart your machine) and see if it picks up the right path.
Instead of ec2-describe-images, can you run it as "./ec2-describe-images" - does that work? If not, can you check the permissions on that script?
When I build project from terminal by using 'xcodebuild' command I succeed, but when I try to do run same script from cron task I receive error
"Code Sign error: The identity '****' doesn't match any valid certificate/private key pair in the default keychain"
I think problem is in settings and permissions of crontab utility, it seems crontab does not see my keychain
Can anyone provide me terminal command how to make my keychain visible for crontab
I encountered a similar issue with trying to build nightly via cron. The only resolution I found was to create a plist in /Library/LaunchDaemons/ and load it via launchctl. The key necessary is "SessionCreate" otherwise you will quickly run in to problems similar to what was encountered with trying to use cron -- namely that your user login.keychain is not available to the process. "SessionCreate" is similar to "su -l" in that (as far as I understand) it simulates a login and thus default keychains you expect will be available; otherwise, you are stuck with only the System keychain despite the task running as your user.
I found the answers (though not the top answer currently) here useful in troublw shooting this issue: Missing certificates and keys in the keychain while using Jenkins/Hudson as Continuous Integration for iOS and Mac development
You execute your cron job with which account ?
most probably the problem !!
You can add
echo `whoami`
at the beginning of your script to see with which user the script is launched.
Also when a Bash script is launched from cron, it don't use the same environment variable (non login shell) as when you launch it as a user.
When the script launches from cron, it doesn't load your $HOME/.profile (or .bash_profile). Anything you run from cron has to be 100% self-sufficient in terms of it's environment. I'd suggest you make yourself a file called something like "set_build_env.sh" It should contain everything from your .profile that you need to build, such as $PATH, $HOME, $CLASSPATH etc. Then in your build script, load set_build_env.sh using the dot notation or source cmd as ericc said. You should also remove the build-specific lines from your.profile and then source set_build_env from there too so only one place to maintain. Example:
source /home/dmitry/set_build_env.sh #absolute path
. /home/dmitry/set_build_env.sh #dot-space notation same as "source"