I needed to retain the words enclosed in brackets and delete the others in the following string.
(a(b(c)d)(e)f)
So what I expected would be (((c))(e)).
To delete a, b, d, f, I tried the 'not followed by' regex.
str <- "(a(b(c)d)(e)f)"
gsub("([a-z]+)(?!\\))", "", str) #(sub. anything that isn't followed by a ")" )
The message shows my regex in invalid. As I can see, the brackets in the second part of the regex "(?!\))" don't match properly. As for my editor, the first "(" matches with the immediately following ")", which is not meant to be a closure bracket (the one to its right is). I could make out just this error from my regex. Can you please tell me what actually is wrong? Is there any other way to do this?
In two steps, and using positive lookaheads:
str1 <- gsub("\\([a-z](?=\\()", "\\(", str, perl=TRUE)
str1
# [1] "(((c)d)(e)f)"
str2 <- gsub("\\)[a-z](?=\\))", "\\)", str1, perl=TRUE)
str2
# [1] "(((c))(e))"
Edit: it turns out you can even do it in one:
gsub("([\\(\\)])[a-z](?=\\1)", "\\1", str, perl=TRUE)
# [1] "(((c))(e))"
I agree with #Dason's comment:
st <- "(a(b(c)d)(e)f)"
while(grepl("\\([a-z]+\\(",st)) {
st <- sub("\\([a-z]+(\\(.+\\))[a-z]+\\)","\\1",st)
}
> st
[1] "(c)(e)"
Written on my iPad :-)
Related
I'm trying to subdivide my metacharacter expression in my gsub() function. But it does not return anything found.
Task: I want to delete all sections of string that contain either .ST or -XST in my vector of strings.
As you can see below, using one expression works fine. But the | expression simply does not work. I'm following the metacharacter guide on https://www.stat.auckland.ac.nz/~paul/ItDT/HTML/node84.html
What can be the issue? And what caused this issue?
My data
> rownames(table.summary)[1:10]
[1] "AAK.ST" "ABB.ST" "ALFA.ST" "ALIV-SDB.ST" "AOI.ST" "ATCO-A.ST" "ATCO-B.ST" "AXFO.ST" "AXIS.ST" "AZN.ST"
> gsub(pattern = '[.](.*)$ | [-](.*)$', replacement = "", x = rownames(table.summary)[1:10])
[1] "AAK.ST" "ABB.ST" "ALFA.ST" "ALIV-SDB.ST" "AOI.ST" "ATCO-A.ST" "ATCO-B.ST" "AXFO.ST" "AXIS.ST" "AZN.ST"
> gsub(pattern = '[.](.*)$', replacement = "", x = rownames(table.summary)[1:10])
[1] "AAK" "ABB" "ALFA" "ALIV-SDB" "AOI" "ATCO-A" "ATCO-B" "AXFO" "AXIS" "AZN"
> gsub(pattern = '[-](.*)$', replacement = "", x = rownames(table.summary)[1:10])
[1] "AAK.ST" "ABB.ST" "ALFA.ST" "ALIV" "AOI.ST" "ATCO" "ATCO" "AXFO.ST" "AXIS.ST" "AZN.ST"
It seems you tested your regex with a flag like IgnorePatternWhitespace (VERBOSE, /x) that allows whitespace inside patterns for readability. You can use it with perl=T option:
d <- c("AAK.ST","ABB.ST","ALFA.ST","ALIV-SDB.ST","AOI.ST","ATCO-A.ST","ATCO-B.ST","AXFO.ST", "AXIS.ST","AZN.ST")
gsub('(?x)[.](.*)$ | [-](.*)$', '', d, perl=T)
## [1] "AAK" "ABB" "ALFA" "ALIV" "AOI" "ATCO" "ATCO" "AXFO" "AXIS" "AZN"
However, you really do not have to use that complex regex here.
If you plan to remove all substrings from ther first hyphen or dot up to the end, you may use the following regex:
[.-].*$
The character class [.-] will match the first . or - symbol and .* wil match all characters up to the end of the string ($).
See IDEONE demo:
d <- c("AAK.ST","ABB.ST","ALFA.ST","ALIV-SDB.ST","AOI.ST","ATCO-A.ST","ATCO-B.ST","AXFO.ST", "AXIS.ST","AZN.ST")
gsub("[.-].*$", "", d)
Result: [1] "AAK" "ABB" "ALFA" "ALIV" "AOI" "ATCO" "ATCO" "AXFO" "AXIS" "AZN"
This will find .ST or -XST at the end of the text and substitute it with empty characters string (effectively removing that part). Don't forget that gsub returns modified string, not modifies it in place. You won't see any change until you reassign return value back to some variable.
strings <- c("AAK.ST", "ABB.ST", "ALFA.ST", "ALIV-SDB.ST", "AOI.ST", "ATCO-A.ST", "ATCO-B.ST", "AXFO.ST", "AXIS.ST", "AZN.ST", "AAC-XST", "AAD-XSTV")
strings <- gsub('(\\.ST|-XST)$', '', strings)
Your regular expression ([.](.*)$ | [-](.*)$'), if not for unnecessary spaces, would remove everything from first dot (.) or dash (-) to end of text. This might be what you want, but not what you said you want.
Given the following vector of strings x
x <- c("hello", "foo_bar", "blah_blub_(bleep)", "blah_(xyz)", "xyz(_$_)")
I am looking for a regexp to extract everything before the optional parenthesis (and its content). So the final result for the above vector should be:
c("hello", "foo_bar", "blah_blub", "blah", "xyz")
I came up with the following regexp which, however, does not work (why?):
R> sub("^(.*)[_?\\(.*\\)]?$", \\1, x)
[1] "hello" "foo_bar" "blah_blub_(bleep)" "blah_(xyz)" "xyz(_$_)"
Any help is appreciated!
We can match the pattern of zero or more _ followed by ( followed by one more characters until the end of the string and replace it with ''.
sub('_*\\(.*$', '', x)
#[1] "hello" "foo_bar" "blah_blub" "blah" "xyz"
I know you can remove trailing and leading spaces with
gsub("^\\s+|\\s+$", "", x)
And you can remove internal spaces with
gsub("\\s+"," ",x)
I can combine these into one function, but I was wondering if there was a way to do it with just one use of the gsub function
trim <- function (x) {
x <- gsub("^\\s+|\\s+$|", "", x)
gsub("\\s+", " ", x)
}
testString<- " This is a test. "
trim(testString)
Here is an option:
gsub("^ +| +$|( ) +", "\\1", testString) # with Frank's input, and Agstudy's style
We use a capturing group to make sure that multiple internal spaces are replaced by a single space. Change " " to \\s if you expect non-space whitespace you want to remove.
Using a positive lookbehind :
gsub("^ *|(?<= ) | *$",'',testString,perl=TRUE)
# "This is a test."
Explanation :
## "^ *" matches any leading space
## "(?<= ) " The general form is (?<=a)b :
## matches a "b"( a space here)
## that is preceded by "a" (another space here)
## " *$" matches trailing spaces
You can just add \\s+(?=\\s) to your original regex:
gsub("^\\s+|\\s+$|\\s+(?=\\s)", "", x, perl=T)
See DEMO
You've asked for a gsub option and gotten good options. There's also rm_white_multiple from "qdapRegex":
> testString<- " This is a test. "
> library(qdapRegex)
> rm_white_multiple(testString)
[1] "This is a test."
If an answer not using gsub is acceptable then the following does it. It does not use any regular expressions:
paste(scan(textConnection(testString), what = "", quiet = TRUE), collapse = " ")
giving:
[1] "This is a test."
You can also use nested gsub. Less elegant than the previous answers tho
> gsub("\\s+"," ",gsub("^\\s+|\\s$","",testString))
[1] "This is a test."
A comment on my answer to this question which should give the desired result using strsplit does not, even though it seems to correctly match the first and last commas in a character vector. This can be proved using gregexpr and regmatches.
So why does strsplit split on each comma in this example, even though regmatches only returns two matches for the same regex?
# We would like to split on the first comma and
# the last comma (positions 4 and 13 in this string)
x <- "123,34,56,78,90"
# Splits on every comma. Must be wrong.
strsplit( x , '^\\w+\\K,|,(?=\\w+$)' , perl = TRUE )[[1]]
#[1] "123" "34" "56" "78" "90"
# Ok. Let's check the positions of matches for this regex
m <- gregexpr( '^\\w+\\K,|,(?=\\w+$)' , x , perl = TRUE )
# Matching positions are at
unlist(m)
[1] 4 13
# And extracting them...
regmatches( x , m )
[[1]]
[1] "," ","
Huh?! What is going on?
The theory of #Aprillion is exact, from R documentation:
The algorithm applied to each input string is
repeat {
if the string is empty
break.
if there is a match
add the string to the left of the match to the output.
remove the match and all to the left of it.
else
add the string to the output.
break.
}
In other words, at each iteration ^ will match the begining of a new string (without the precedent items.)
To simply illustrate this behavior:
> x <- "12345"
> strsplit( x , "^." , perl = TRUE )
[[1]]
[1] "" "" "" "" ""
Here, you can see the consequence of this behavior with a lookahead assertion as delimiter (Thanks to #JoshO'Brien for the link.)
string<-c(" this is a string ")
Is it possible to trim-off the white spaces on both the sides of the string (or just one side as required) and replace it with a desired character, such as this, in R? The number of white spaces differ on each side of the string and have to be retained on replacement.
"~~~~~~~this is a string~~"
This seems like an inefficient way of doing it, but maybe you should be looking in the direction of gregexpr and regmatches instead of gsub:
x <- " this is a string "
pattern <- "^ +?\\b|\\b? +$"
startstop <- gsub(" ", "~", regmatches(x, gregexpr(pattern, x))[[1]])
text <- paste(regmatches(x, gregexpr(pattern, x), invert=TRUE)[[1]], collapse="")
paste0(startstop[1], text, startstop[2])
# [1] "~~~~this is a string~~"
And, for fun, as a function, and a "vectorized" function:
## The function
replaceEnds <- function(string) {
pattern <- "^ +?\\b|\\b? +$"
startstop <- gsub(" ", "~", regmatches(string, gregexpr(pattern, string))[[1]])
text <- paste(regmatches(string, gregexpr(pattern, string), invert = TRUE)[[1]],
collapse = "")
paste0(startstop[1], text, startstop[2])
}
## use Vectorize here if you want to apply over a vector
vReplaceEnds <- Vectorize(replaceEnds)
Some sample data:
myStrings <- c(" Four at the start, 2 at the end ",
" three at the start, one at the end ")
vReplaceEnds(myStrings)
# Four at the start, 2 at the end three at the start, one at the end
# "~~~~Four at the start, 2 at the end~~" "~~~three at the start, one at the end~"
Use gsub:
gsub(" ", "~", " this is a string ")
[1] "~~~~this~is~a~string~~"
This function uses regular expressions to replace (i.e. sub), all occurrences of a pattern inside a string.
In your case, you have to express the pattern in a special way:
gsub("(^ *)|( *$)", "~~~", " this is a string ")
[1] "~~~this is a string~~~"
The pattern means:
(^ *): Find one or more spaces at the start of the string
( *$): Find one or more spaces at the end of the string
`|: The OR operator
Now you can use this approach to tackle your problem of replacing each space with a new character:
txt <- " this is a string "
foo <- function(x, new="~"){
lead <- gsub("(^ *).*", "\\1", x)
last <- gsub(".*?( *$)", "\\1", x)
mid <- gsub("(^ *)|( *$)", "", x)
paste0(
gsub(" ", new, lead),
mid,
gsub(" ", new, last)
)
}
> foo(" this is a string ")
[1] "~~~~this is a string~~"
> foo(" And another one ")
[1] "~And another one~~~~~~~~"
For more, see ?gsub or ?regexp.
Or using a more complex pattern matching and gsub...
gsub("\\s(?!\\b)|(?<=\\s)\\s(?=\\b)", "~", " this is a string " , perl = TRUE )
#[1] "~~~~this is a string~~"
Or with #AnandaMahto's data:
gsub("\\s(?!\\b)|(?<=\\s)\\s(?=\\b)", "~", myStrings , perl = TRUE )
#[1] "~~~~Four at the start, 2 at the end~~"
#[2] "~~~three at the start, one at the end~"
Explanation
This uses the positive and negative lookahead and look behind assertions:
\\s(?!\\b) - match a space, \\s not followed by a word boundary, (?!\\b). This would work by itself for everything except the last space before the first word, i.e. by itself we would get
"~~~~ this is a string~~". So we need another pattern...
(?<=\\s)\\s(?=\\b) - match a space, \\s that is preceded by another space, (?<=\\s) and is followed by a word boundary, (?=\\b).
And it is gsub so it tries to make the maximal number of matches that it can.