Getting slime to find files on classpath, and contrib - clojure

I recently decided to start using Slime/Swank for writing Clojure. I installed Incanter, Clojure, Slime and Swank yesterday by following this blogpost to the letter, which worked fine. However, I'm experiencing a problem getting Slime to find directories and files on the classpath. I'm running Slime using lein swank and slime-connect in Aquamacs on OS X 10.6. I have two questions:
1) I set up a small project to build a game of life simulation. I have a file called grid.clj from doing this earlier, which I put in the project's lib directory. In core.clj I put the following
(ns gof.core
(:require grid))
(def w (grid.make_grid 8))
Doing C-x C-e after this piece of code gives this error message in the repl:
Could not locate grid__init.class or grid.clj on classpath:
[Thrown class java.io.FileNotFoundException]
so I looked at my classpath using
(doseq [p (.getURLs (java.lang.ClassLoader/getSystemClassLoader))] (println (.getPath p)))
which produced this:
/Users/zjanes/Documents/gof/test/
/Users/zjanes/Documents/gof/test-resources
/Users/zjanes/Documents/gof/src/
/Users/zjanes/Documents/gof/classes/
/Users/zjanes/Documents/gof/resources
/Users/zjanes/Documents/gof/lib/clojure-1.3.0.jar
/Users/zjanes/Documents/gof/lib/grid.clj
/Users/zjanes/.lein/plugins/swank-clojure-1.3.4.jar
nil
user>
It seems to me that grid.clj is on this classpath, so why am I getting the error message?
2) In trying to solve this I had a look at clojure-1.3.0.jar and couldn't find anything that looks like it comes from clojure.contrib. Is contrib not included when installing clojure as described above?
I'm sure it's obvious I'm a complete novice with clojure, so the clearer the answer, and the less presumed knowledge, the better.
For completeness, I've looked at these answers (1 2 3) and this page, plus some googling around.
Thanks in advance

that tutorial is from 2009 and as far as I can tell it can't be made to work using those instructions.
Clojure contrib has been split up into many sub projects in clojure 1.3 so it no longer exits under that name.
in general clojure namespaces now have two parts, for instance:
(ns gof.core
(:require [incanter.grid])

Related

Clojure: how to tell if code is running in the REPL or a JAR?

I am writing a CLI framework in Clojure called OneCLI. The main center piece of this framework is a function called go! which parses the command line, environment variables, and config files "for you" and runs one of several different user provided functions based on what was provided in those inputs.
Typically, go! is called from the -main function of the user's calling Clojure program. I use my own library, for example, in another "uberjar" style app called zic. The function go! calls System/exit as part of its run, passing it an exit code that comes from the result of the user provided function. This works great "in production", but it also means that I can't run the zic.cli/-main function from the REPL, as whenever I do it calls System/exit and the REPL exits.
Before you ask, running it from the REPL while developing on a raspberry pi avoids the expensive 45 seconds it takes to run lein uberjar/1 minute 30 seconds to run clj -X:depstar uberjar :jar ....
My question is: Is there some var or value I can check as part of Clojure's standard library that tells my OneCLI code whether it's running from the REPL or if it's running from a JAR?
Such a variable would enable me in OneCLI to detect that we're running from a REPL so that it can avoid calling System/exit.
Instead of trying to have one function that magically detects what environment you're running from, it's quite simple to just have two functions that behave differently.
Extract out the shared behavior to a function that is not part of -main. Call it run or whatever.
Have -main call that function, and then call System/exit
When you wish to use the program from a repl, call run instead of -main. It will finish normally, and not call System/exit.
I don't know how to detect if you're running at a REPL. I took a quick look through Clojure's launching code (clojure.main), but I didn't see any hooks to detect whether you're in a REPL compared to something run via clojure -m.
If you're using AOT (like you are in zic) then you could check whether any of the "REPL" variables (*1, *2, *3, and *e) are bound.
;; returns true in a REPL and `clojure -m`, and
;; returns false in an AOT jar file run with java -jar
(bound? #'*1)
This solves your question as it was asked, but I don't love this "magical" mechanism of guessing the programmer's intent. It might work for your use case (given I think AOT saves on startup time, and CLI tools probably want to start quickly), but none of the projects I work on use AOT at all.
Another option to solve your problem in the clojure -m case as well would be to require developers to explicitly opt out of the "exit on completion" behaviour. One way to do that could be to use a property.
(defn maybe-exit [exit-code]
(cond
(= (System/getProperty "onecli.oncompletion") "remain") (System/exit exit-code)
(= exit-code 0) nil
:else (throw (ex-info "Command completed unsuccessfully" {:exit-code exit-code}))))
Using this code, in a development environment you can add
:jvm-opts ["-Donecli.oncompletion=remain"]
to your deps.edn or project.clj file, but leave it out when running "in production". This has the advantage of being more explicit, but the cost is that developers have to be more explicit.
This is an interesting question because it's usually dreadful to put JVM shutdown into a library, but on the other hand a "real app" involves lots of boilerplate that would be great to share... such as hiding the jar's splash gif at the right time, or (re)opening a Windows terminal if the app wants stdio.
Your uberjar will contain clojure.main, so it is quite possible (and useful) to run the REPL in your uberjar (java -cp my-whole-app.jar clojure.main). Therefore, "detecting" clues on the classpath might not help.
Instead, manage JVM-shutdown work in the -main in the namespace that your jar's manifest declares as its Main-Class. That is: if you run it as java -jar my-whole-app.jar, then it should shut everything down properly.
But I do not always want -main to shut everything down, you say. Then you need two -mains. Make a second -main in a different namespace. Let the jar's Main-Class -main do absolutely nothing but (1) delegate to the second main and (2) shut down the JVM at the end. When you're in the REPL, invoke the second -main, the one that won't clobber the JVM. You can factor out most of each -main into a library. If you went "full framework" you could even make the framework own the uberjarring process and the Main-Class.
Every Java JAR file must have the file META-INF/MANIFEST.MF
added. If it isn't present, you cannot be running in a (normal) JAR file. While you could fool this detector by putting a bogus file on the classpath (i.e. in ./resources, for example), it is a reliable way of detecting a normal JAR file.
Problem:
Dependency JAR files are sometimes sloppy and will pollute the classpath with their own META-INF/MANIFEST.MF files, so the presence of any random META-INF/MANIFEST.MF is not enough to determine the answer in the presence of "noise" files. So, you need to check for the existence of your own specific META-INF/MANIFEST.MF file. This is easy to do if you know the Maven values for ArtifactId and GroupId.
In a Leiningen project, the first line of project.clj looks like
(defproject demo-grp/demo-art "0.1.0-SNAPSHOT"
for a group ID of demo-grp and an artifact ID of demo-art. If your file looks like this:
(defproject demo "0.1.0-SNAPSHOT"
then both the group ID and artifact ID will be demo. Your particular MANIFEST.MF will look like
> cat META-INF/MANIFEST.MF
Manifest-Version: 1.0
Created-By: Leiningen 2.9.1
Built-By: alan
Build-Jdk: 15
Leiningen-Project-ArtifactId: demo-art
Leiningen-Project-GroupId: demo-grp
Leiningen-Project-Version: 0.1.0-SNAPSHOT
Main-Class: demo.core
Set up a function using the to ID strings to detect the presence of your particular project MANIFEST.MF:
(ns demo.core
(:require [clojure.java.io :as io])
(:gen-class))
(def ArtifactId "demo-art")
(def GroupId "demo-grp")
(defn jar-file? []
(let [re-ArtifactId (re-pattern (str ".*ArtifactId.*" ArtifactId))
re-GroupId (re-pattern (str ".*GroupId.*" GroupId))
manifest (slurp (io/resource "META-INF/MANIFEST.MF"))
f1 (re-find re-ArtifactId manifest)
f2 (re-find re-GroupId manifest)
found? (boolean (and f1 f2))]
found?))
(defn -main []
(println "main - enter")
(println "Detected JAR file: " (jar-file?))
)
You can now test the code:
~/expr/demo > lein clean ; lein run
main - enter
Detected JAR file: false
~/expr/demo > lein clean ; lein uberjar
Compiling demo.core
Created /home/alan/expr/demo/target/uberjar/demo-art-0.1.0-SNAPSHOT.jar
Created /home/alan/expr/demo/target/uberjar/demo-art-0.1.0-SNAPSHOT-standalone.jar
~/expr/demo > java -jar /home/alan/expr/demo/target/uberjar/demo-art-0.1.0-SNAPSHOT-standalone.jar
main - enter
Detected JAR file: true
Example of "noise" JAR file: If we do a lein clean; lein run, and add a line to our main program
(println (slurp (io/resource "META-INF/MANIFEST.MF")))
we get out:
Manifest-Version: 1.0
Archiver-Version: Plexus Archiver
Built-By: jenkins
Created-By: Apache Maven 3.2.5
Build-Jdk: 1.8.0_111
I have no idea where this is coming from to get on the CLASSPATH.
P.S. for Leiningen JAR files
When using lein to build a JAR file, it always places a copy of the project.clj file at the location:
META-INF/leiningen/demo-grp/demo-art/project.clj
so you could also use this file's presence/absence as a detector.
Update
OK, it looks like the the MANIFEST.MF file is highly dependent on your build tool. See
https://docs.oracle.com/javase/tutorial/deployment/jar/defman.html
https://www.baeldung.com/java-jar-manifest
So, your choices appear to be:
For lein, you can use the above technique.
You could use the REPL trick of *1 from the other answer.
You could always have your build tool include a custom key-value pair in the manifest and then detect that.
Update #2
An alternate answer, and perhaps easier, is to use the lein-environ plugin and environ library (you need both) to detect the environment (assuming you are using lein to create your REPL). Your project.clj should look like:
:dependencies [
[clojure.java-time "0.3.2"]
[environ "1.2.0"]
[org.clojure/clojure "1.10.2-alpha1"]
[prismatic/schema "1.1.12"]
[tupelo "21.01.05"]
]
:plugins [[com.jakemccrary/lein-test-refresh "0.24.1"]
[lein-ancient "0.6.15"]
[lein-codox "0.10.7"]
[lein-environ "1.2.0"]
]
and you need a profiles.clj:
{:dev {:env {:env-mode "dev"}}
:test {:env {:env-mode "test"}}
:prod {:env {:env-mode "prod"}}}
and a namespace demo.config like:
(ns demo.config
(:require
[environ.core :as environ]
))
(def ^:dynamic *env-mode* (environ/env :env-mode))
(println " *env-mode* => " *env-mode*)
And then you get results like:
*env-mode* => dev ; for `lein run`
*env-mode* => test ; for `lein test`
*env-mode* => nil ; from `java -jar ...`
You need to type:
lein with-profile :prod run
to produce
*env-mode* => prod

how to get meaningful dependency errors in clojure?

If I add the following require:
(ns project.core
(:require
[compojure.route :as route])
(:gen-class))
(defn -main [& {:as args}]
(println "hello"))
an do
lein run
I get
Syntax error macroexpanding clojure.core/ns at (ring/util/mime_type.clj:1:1).
((require [clojure.string :as str])) - failed: Extra input spec: :clojure.core.specs.alpha/ns-form
is there a way I can get
"compojure.route not found; not defined; or whatever" e.g. something meaningful?
if I remove it it works fine. e.g. it says Hello
using Leiningen 2.9.4 on Java 14.0.1 OpenJDK 64-Bit Server VM
The project you are using is using very old dependencies. Clojure spec (introduced "recenlty") added macro/compile time checks and the mentioned file there triggers it.
compojure.route actually is found and it then requires its transitive deps. And while going down the chain ring.util.mime-type is required and the version you are using is not ready for current Clojure versions.
Your best bet here is to upgrade your deps. E.g. if you are following a book or if you are using a template this things can happen. If you have lein-ancient installed, it can attempt the update for you. Otherwise your best bet is to start in your project.clj and compare versions (e.g. check clojars).
If the problem still persists, have a look at lein deps :tree and see what is going on with the transtive deps.

How to integrate libraries (clojars) into Lightable plugins

As exercise to gain experience with ClojureScript I am writing a LightTable Plugin and I find no way to successfully use any standard library, I read the official documentation and even updated it to reflect latest changes regarding paths etc.. I followed this video and read the whole thread on the google group trying the proposed solutions, even working with the latest github source without luck.
I tried including core.async or cljs.http (I know the embedded nodejs alternative, just as example) following the proposed workflow by Irakli on the Google discussion. Simplest possible scenario:
$ lein version
Leiningen 2.5.0 on Java 1.7.0_55 Java HotSpot(TM) 64-Bit Server VM (Mac OS X 10.9.5) and LT latest (0.7.2)
$ lein new lt-plugin sample
plugin project.clj->
(defproject sample "0.0.1"
:dependencies [[org.clojure/clojure "1.5.1"]
[cljs-http "0.1.20"]
])
core file
(ns lt.plugins.sample
(:require [lt.object :as object]
[lt.objs.tabs :as tabs]
[lt.objs.command :as cmd]
[cljs-http.client :as http]
)
(:require-macros [lt.macros :refer [defui behavior]]))
(defn get-users
""
[]
(let [response (http/get "https://api.github.com/users" {:with-credentials? false})]
(prn (:status response))
(prn (map :login (:body response))))) ; evaluated correctly
(get-users) ; loads of errors like
WARNING: Referred var clojure.string/split does not exist at line 1 file:/Users/jaime/.m2/repository/noencore/noencore/0.1.16/noencore-0.1.16.jar!/no/en/core.cljs
I run lein deps, save, reload behaviours, restart, refresh plugin lists... all possible combinations tried, with the plugin folder within ~/Library/Application Support/LightTable/plugins or outside.
Should I download the jars and put them manually into a lib folder? I guess lein deps is not working as I expect
Yes currently seems that Cljs native or Cljx for that matter, doesn't resonate well with the LightTable UI.
Trying https://github.com/swannodette/om/wiki/Basic-Tutorial you'll find that it doesn't take much. You can create a LT keybinding to open browser tab, navigate to project folder index.html and make another for reloading (as autoreload is a work in progress I think). Then another tab with the Cljs file while you have the cljsbuild auto running, refresh browser and changes should be witnessed.

How to :use (or :require) a custom file in Clojure?

Super beginner question here. I'm following the (good) book Programming Clojure, and chapter 5 is about coding a small Snake game. Utility code is provided, and I decided to follow it by starting a new Leiningen project (lein new app snake). In my src/snake/core.clj I'd like to :use a file named import_static.clj written by the authors. I copied the file into src/snake, and in src/snake/core.clj I copied from the samples the import line (:use snake.import-static). But when I evalute the whole file in the REPL I have this error : "FileNotFoundException Could not locate import_static__init.class or import_static.clj on classpath".
Using Clojure 1.5.1, both in the project.clj file and the editor's REPL (SublimeText + plugin SublimeREPL). The directory structure :
src/
snake/
core.clj
import_static.clj
Top of core.clj :
(ns snake.core
(:import (java.awt Color Dimension)
(javax.swing JPanel JFrame Timer JOptionPane)
(java.awt.event ActionListener KeyListener))
(:gen-class)
(:use snake.import-static))
Top of import_static.clj :
(ns ^{:author "Stuart Sierra",
:doc "Import static Java methods/fields into Clojure"}
snake.import-static
(:use clojure.set))
I tried removing the snake from both the :use call and the namespace declaration, with no luck. Can you help me ? Note that I have no knowledge of the JVM, and it may be the classpath or my editor.
I just found out, and thought I would share the answer with everyone.
It had nothing to do with the code, but my editor's REPL. Lein's REPL was ok as I could run lein run and lein repl and see the prompt being set to the namespace snake.core=>, whereas in SublimeText's SublimeREPL's REPL it was set to user.core=>. I just had to close it, open the project.clj file and from here open launch a Clojure REPL with SublimeREPL. It is now set properly to snake.core=> and no more error.
Back to coding !

clojure namespaces .core file and repl

A beginners question.
running clojure using lein + emacs + nrepl.
I am slightly confused about the following:
I wish to use the exponent function. This function lives in the following place clojure.math.numeric-tower. I add [org.clojure/math.numeric-tower "0.0.1"] to the dependencies and run lein deps.
Now is it possible (I'm sure it is possible) to add this to my .core ns as follows:
(ns learning.core
(:require [clojure.math.numeric-tower :as math]))
(def i-know-the-answer
(math/expt 2 10))
now when I try to load (ctl-x e) this into the REPL, it throws errors.
clojure.lang.Compiler$CompilerException: java.lang.RuntimeException: No such namespace: math, compiling:(NO_SOURCE_PATH:2)
do the dependencies need to be loaded into the REPL directly? Can I not just change the source file / recompile it and use that?
Load the file with ctrl-c ctrl-l then Switch your repl to the namespace in that file with either
(in-ns 'learning.core)
Or hit ctrl-c alt-n from the Clojure buffer to switch the repl to the buffer's namespace. You can tell if it worked by looking at the prompt in the repl.