I'm having problems installing Diffuse on Ubuntu 20 - compare

I need a good "compare and merge" utility.
I though that Diffuse would be good since it has 3-way compare and is GIT compatible - but I can't figure out how to install it. I tried with python2 and with python3.
after apt-get update, I tried sudo apt-get install diffuse
and received the following:
Package diffuse is not available, but is referred to by another package.
This may mean that the package is missing, has been obsoleted, or
is only available from another source
E: Package 'diffuse' has no installation candidate
I'd appreciate any help - or suggestion for a good GUI compare that does 3-way comparison.
Thanks,
Mechi

Related

completely remove edb-debugger from ubuntu 18.04

I was trying to upgrade my edb debugger from 0.9 to 1.0. I cloned the repo from github, compiled it and installed it. Unfortunately I forgot to uninstall the old version itself so I ran into some problems. Ithen decided to remove all of edb and start from scratch. I did all sorts of sudo commands (i.e. purge autoremove etc) yet the edb icon is still in my applications menu and works (to a degree cause then I get failed to load necessary plugin). Probably help to mention that I used cmake to compile and install the newer version.
So the question is how do I go about removing all of edb and start over ?
idzireit
This will remove the edb-debugger package and any other dependant packages which are no longer needed.
sudo apt-get remove --auto-remove edb-debugger
If you also want to delete your local/config files for edb-debugger then this will work.
sudo apt-get purge edb-debugger
sudo apt-get purge --auto-remove edb-debugger
To fully install edb-debugger ,follow this link
https://github.com/eteran/edb-debugger/wiki/Installing
Or else try this in your terminal
sudo apt-get install edb-debugger
If this process do not work, please comment below
I have made a very ugly work around o get it working without any errors. When it loads up I changed the symbol directory to point at the symbol directory from the build. In my case this would be the following:
/home/USERNAME/edb-debugger/build/plugins/SymbolViewer/CMakeFiles/SymbolViewer_autogen.dir
Then I did the same with the plugin directroy and made it point to:
/home/USERNAME/edb-debugger/build
I left the third directory (Session Directory) alone. Might play around with that at a later date but it is working even though loaded with ugly hacks.
If anyone has any better answers please advise how to prettify this fix up some.

upgrading protobuf tensorflow on jetson tx2

To give as much background as possible -
I have a machine learning model trained using keras i'm trying to embed on an nvidia jetson tx2.
I have set up tensorflow on there (a bit of a pain in itself) however when i run my script i'm hitting an error with protobuf.
Using TensorFlow backend.
[libprotobuf FATAL google/protobuf/stubs/common.cc:61] This program requires version 3.1.0 of the Protocol Buffer runtime library, but the installed version is 2.6.1. Please update your library. If you compiled the program yourself, make sure that your headers are from the same version of Protocol Buffers as your link-time library. (Version verification failed in "external/protobuf/src/google/protobuf/any.pb.cc".)
terminate called after throwing an instance of 'google::protobuf::FatalException'
what(): This program requires version 3.1.0 of the Protocol Buffer runtime library, but the installed version is 2.6.1. Please update your library. If you compiled the program yourself, make sure that your headers are from the same version of Protocol Buffers as your link-time library. (Version verification failed in "external/protobuf/src/google/protobuf/any.pb.cc".)
Aborted (core dumped)
So - i upgraded protobuf using pip at first but i thought the clash is because c++ version is taking priority and the version in linux was still stating 2.6.1 however after building in c++ the version is now shown as 3.1.0 however i am still getting the same error.
From the nvidia dev forums i received some feedback
"/usr/lib/aarch64-linux-gnu/libprotobuf.so.9.0.1
This means that C/C++ code will find version 2.6.
pip install protobuf-3.1.0-py2.py3-none-any.whl
This means that Python code will find version 3.1.
You need to upgrade the C++ (system) library to match version 3.1.
I don't think there's a default package on Ubuntu that does this, so you will have to either hack it by building your own and installing it on top of the system package, or you will have to find a deb package that has a newer version that will still install on your current system."
Ive really been struggling with this as i cant find a way to upgrade the system files. Any help would be much appreciated
Thanks
edit: i'm also wondering could this be a clash with GTK (i am also using openCV here so thats worth a mention!)
Please check your version of libprotobuf-dev.
Please try to uninstall your existing one on your PC with following commands:
apt-get remove --purge libprotobuf-dev
Then, build new version of libprotobuf-dev:
apt-get install autoconf automake libtool curl make g++ unzip
wget https://github.com/google/protobuf/releases/download/v3.5.0/protobuf-cpp-3.5.0.tar.gz
tar -xvf protobuf-cpp-3.5.0.tar.gz
cd protobuf-3.5.0
./autogen.sh
./configure
make
make check
sudo make install
sudo ldconfig
Good luck.
References:
https://github.com/BVLC/caffe/issues/5711
https://github.com/google/protobuf/issues/2979
step 1:
first, uninstall with purge protobuf
sudo apt-get remove --purge libprotobuf
step 2:
start a fresh one
$ wget https://raw.githubusercontent.com/jkjungavt/jetson_nano/master/install_protobuf-3.6.1.sh
sudo chmod +x install_protobuf-3.6.1.sh
./install_protobuf-3.6.1.sh #this time will take 30 min on my board.

Matplotlib install issues. Pip Centos - Freetype "Missing" when it is installed

I am using a virtualenv for a django setup. I am trying to build a view that pulls data from logs and then graphs the data. Eventually I would like to have this real-time and live. If you have any recommendations on other solutions that would suit my project best, please do not hesitate to include them in the comment fields below.
I have attempted to install matplotlib from pip using pip install matplotlib.
I receive the following message:
* The following required packages can not be built:
* freetype
I then validated that it was installed
yum install freetype
Package freetype-2.3.11-14.el6_3.1.x86_64 already installed and latest version
I then found that there is a python-matplotlib which is an older version .99. However, I want to keep this inside of the virtual environment and not system wide.
find / -name *freetype*
/var/lib/yum/yumdb/f/d2807dcfe3762c0b9f8ef1d9bf0f05788e73282a-freetype-2.3.11-14.el6_3.1- x86_64
/usr/lib64/libfreetype.so.6.3.22
/usr/lib64/libfreetype.so.6
/usr/share/doc/freetype-2.3.11
I searched all over stackoverflow and only saw solutions for ubuntu which did not transfer over to centos.
Thank you for your time,
John
pip is going to compile matlibplot on your local machine, so you'll need freetype development headers installed as well.
CentOS 6+, Fedora, etc.:
$ sudo yum -y install freetype freetype-devel libpng-devel
On older operating systems (e.g. CentOS 5), you may run into a more specific freetype versioning issue with newer releases of matlibplot. If you're version agnostic, sticking with a legacy 1.3.x release will negate these dependency issues:
$ pip install matplotlib==1.3.1
Please note, you may need to downgrade your numpy to 1.8 in order to make matplotlib 1.3 work.
$ pip install numpy==1.8
Good luck!
I have just had a similar (albeit not exactly the same) situation. I'll write it up here as this page comes up among the first search results.
CentOS 5
pip install matplotlib complains about freetype
Both freetype and freetype-devel are installed.
~/.pip/pip.log provides the explanation of the problem. There is the line:
freetype: no [Requires freetype2 2.3 or later. Found 2.2.1.]
Obviously, the solution is either to upgrade freetype or downgrade matplotlib.
The second is easier (assuming I am OK with the older version).
pip install matplotlib==1.3.1 works fine.
On the matplotlib installation, this is what I did. Not sure if this is going to help you. Just followed the steps here:
http://pkgs.org/centos-6/centos-x86_64/python-matplotlib-0.99.1.2-1.el6.x86_64.rpm.html
I did not use pip, btw and have CentOS 6.4.
I had this happen to me in two different situations, see if yours is one of them:
freetype was installed, but not in the $PATH yet. Just exiting the shell and starting a new one fixed this.
I was building matplotlib from source, and trying to build from the master branch. After I switched to v1.3.x it correctly detected freetype.

Install Spatialite for python (GeoDjango) on OS X

I am tearing my hair out trying to install Spatialite for GeoDjango!
I am already using Homebrew, it's generally easy and convenient so I initially tried to follow the Homebrew instructions for GeoDjango.
But this stops short of installing any database, i.e. Spatialite. The next step is to try and install Spatialite itself, but there are no Homebrew-specific instructions provided by Django docs.
I found this tutorial which looks perfect - a Homebrew and virtualenv-friendly install of Spatialite for GeoDjango.
But it doesn't work... it appears that my pysqlite is linked against the non-spatial-enabled version of SQLite that comes with OS X, rather than the Spatial-ised one I installed from Homebrew, I get this error when Django tried to connect to the db:
"The pysqlite library does not support C extension loading. Both SQLite and pysqlite must be configured to allow the loading of extensions to use SpatiaLite."
The author of pysqlite hasn't responded to my pleas for help on Github and I haven't found anything via Google.
So I went back to the drawing board and decided to follow the "Mac OS X-specific instructions" in the GeoDjango docs... by installing the various geo libs from the KyngChaos binary packages.
The docs say "Install the packages in the order they are listed above" but I found I couldn't install UnixImageIO without installing PROJ first. The link in the docs to download Spatialite binaries (http://www.gaia-gis.it/spatialite-2.3.1/binaries.html) is broken so I used the "Spatialite Tools v4.1" from KyngChaos instead.
Proceeding to the next step I get this error:
$ spatialite geodjango.db "SELECT InitSpatialMetaData();"
SQLite header and source version mismatch
2013-10-17 12:57:35 c78be6d786c19073b3a6730dfe3fb1be54f5657a
2013-09-03 17:11:13 7dd4968f235d6e1ca9547cda9cf3bd570e1609ef
Not really sure what's wrong at this point.
There is someone else here on SO who has gone the KyngChaos route and just ends up with the same "Both SQLite and pysqlite must be configured to allow the loading of extensions" error I got from the Homebrew route anyway.
I found this ticket #17756 for adding pyspatialite support to Django - pyspatialite is supposed to be an easier way to pip install everything but unfortunately it doesn't work either (see comments towards bottom of ticket).
I'm a bit reluctant to start trying to build everything from source by hand as it seems likely I'll just run into the same problems again, but spending hours Googling for info about cryptic compiler errors, magic flags and paths etc along the way.
I'm about ready to give up and just use Postgres/PostGIS.
I was able to get this working now, using the tip here:
https://github.com/ghaering/pysqlite/issues/60#issuecomment-50345210
I'm not sure if it was using the real paths that fixed it, or just the Homebrew kegs or underlying packages have been updated and now install cleanly. Still, it works now.
I reproduce below the steps I took:
brew update
brew install sqlite # 3.8.5
brew install libspatialite # 4.2.0
brew install spatialite-tools # 4.1.1
git clone https://github.com/ghaering/pysqlite.git
cd pysqlite
(where brew reported I had existing versions I unlinked them and installed the latest as commented above)
then edited setup.cfg to comment out #define=SQLITE_OMIT_LOAD_EXTENSION and specify the paths:
include_dirs=/usr/local/opt/sqlite/include
library_dirs=/usr/local/opt/sqlite/lib
activated the virtualenv where I want it installed, then
python setup.py build
python setup.py install
(build_static still fails with clang: error: no such file or directory: 'sqlite3.c')
(maybe I should have done pip install . as suggested in the github issue)
now the spatialite geodjango.db "SELECT InitSpatialMetaData();" succeeds, albeit with an ignorable error:
InitSpatiaMetaData() error:"table spatial_ref_sys already exists"
i.e. it's probably not even necessary to run that command
When I was istalling this i follow this instructions https://docs.djangoproject.com/en/dev/ref/contrib/gis/install/spatialite/#pysqlite2
pysqlite2
If you’ve decided to use a newer version of pysqlite2 instead of the sqlite3 Python stdlib module, then you need to make sure it can load external extensions (i.e. the required enable_load_extension method is available so SpatiaLite can be loaded).
This might involve building it yourself. For this, download pysqlite2 2.6, and untar:
$ wget https://pypi.python.org/packages/source/p/pysqlite/pysqlite-2.6.3.tar.gz
$ tar xzf pysqlite-2.6.3.tar.gz
$ cd pysqlite-2.6.3
Next, use a text editor (e.g., emacs or vi) to edit the setup.cfg file to look like the following:
[build_ext]
#define=
include_dirs=/usr/local/include
library_dirs=/usr/local/lib
libraries=sqlite3
#define=SQLITE_OMIT_LOAD_EXTENSION
I had the same error: SQLite header and source version mismatch.
For me it was enough to update libsqlite3-dev.
After that invoking $ spatialite geo.db "SELECT InitSpatialMetaData();" creates proper database.

Specify which version to install with macports

I would like to install a specific version of gdb and gcc with macports on mac os x leopard, not the last one, but the 6.8 for gdb. Is it possible?
It is possible. It's just convoluted and tedious. It's listed in the documentation these days.
Steps
Go to macports trac and find the package you're looking for. This is the link for subversion, which is the package I'll be using in the example.
Click the PortFile
Click Revision Log (top right)
Pour through the revisions until you find the version you're looking for. Remember the revision number.
In this example I'm looking for version 1.7 of subversion.
With that revision number noted. You need to checkout the version of that subdirectory at that revision.
cd /tmp
svn co http://svn.macports.org/repository/macports/trunk/dports/devel/subversion --revision 106629
Then cd into the folder and run the install
cd subversion
sudo port install
Then it should become selected by default. You can check with
sudo port installed subversion
The following ports are currently installed:
subversion #1.7.10_0 (active)
subversion #1.8.8_0
subversion #1.8.10_0
As I just came across this question when trying to figure out how to download an older version of curl, I thought I'd share an update:
The currently accepted answer did not work for me any longer. This is with MacPorts 2.2.0. What I did was the following.
I started following the directions located here. I ended up using the SVN method, since the first method didn't work. What I didn't realize is that I was missing a critical step.
I found another post that suggested moving the downloaded directory to /private/tmp. After doing this, I cd into the new directory and after a sudo port install I was able to install the older version.
I am on a Mac running OS X 10.8, so your mileage may vary.
This post is old.. but specifying a version is possible. For example I want to install ZeroMQ version 3.2.2 so I use:
sudo port install zmq #3.2.2
And it always helps to goto the MacPorts website and search to see if they have what you are looking for.
As far as I know it is not possible at all to install other versions than the exact version, unless there is a specific port for a certain version.
The only thing you could do is fetch the portfile of the desired version from the Macports subversion repository.
In your case only gdb 7.2 is available on the current version, no variants and no other versions - sorry :)