Here is my basic data structure (or the relevant portions anyway) in DynamoDB; I have a files table that holds file data and has an id for the file. I also have a 'Definitions' table that holds items defined in the file. Definitions also have an ID (as the primary key) as well as a field called 'SourceFile' that references the file id in order to tie the definition to it's source file.
Most of the time I want to just get the definition by it's id and optionally get the file later which works just fine. However, in some cases I need to get all definitions for a set of files. I can do this with a scan but it's slow and I know that it will get slower as the table grows and isn't recommended. However I'm not sure how to do this with a query.
I can create a GSI that uses the SourceFile field as the primary key and use that to query against. This sounds like an answer (and may be), however I'm not sure. The problem is that some libraries may have 5k or 10k files (maybe more in rare cases). In a GSI I can only query against 1 file ID per query so I would have to throw a new query for each file and I can't imagine it's going to be very efficient to throw 10K queries at DynamoDB...
Is it better to create a tight loop (or multiple threads) and hit it with a ton of queries or to scan the table? Is there another way to do this that I'm not thinking of?
This is during an indexing and analysis process that is expected to take a bit of time so it's ok that it's not instant but I'd like it to be as efficient as possible...
Scans are the most efficient if you expect to be looking for a majority of data in your database. You can retrieve up to 1MB per scan request, and for each unit of capacity available you can read 4KB, so assuming you have enough capacity provisioned, you can retrieve thousands of items in a single request (assuming the items are pretty small).
The only alternative I can think of is to add more metadata that can help you index the files & definitions at a higher level - like, for instance, the library name/id. With that you can create a GSI on library name/id and query that way.
Running thousands of queries is going to less efficient than scanning assuming you are storing on the order of tens/hundreds of thousands of items.
Related to this question, I'm looking for more a more specific answer. In an effort to keep this non-subjective, here is a full thought process for creating an activities table with a stuck point that can be finished with a quick example answer.
In an effort to better understand DynamoDB, I'm creating a personal website that contains an activity feed from a DynamoDB table. The goal is to evenly distribute partition keys while still being able to sort across all partition keys (I'm struggling with this part).
Different types of activities will include blog posts, projects, twitter post references, LinkedIn post references, etc. Using the activity type as a partition key would not be wise as my activity is highly weighted, mostly on the twitter side, hardly ever creating blog posts.
A unique activity id seems to be the best option for evenly distributing activities across DynamoDB partitions. However, this completely removes the ability to sort activities to start, as queries require a partition id to be known first. This is where a secondary global index (SGI) will be helpful. With this, a sort key will not be required on the primary partition key, but paired in an SGI.
This is part where I'm stuck. What do I base the SGI partition key on? At the moment I'm thinking of a single value "activity" for all activities with a sort key of "date", but that is a single partition for all entries. Will a single SGI partition key value limit performance in this project?
Note that this is a small scale project. However, I'm thinking about large scale projects while building this one, attempting to create the best DynamoDB table possible in regards to optimized partition distribution, while still keeping it flexible for sorting all table records.
Consider GSI (Global Secondary Index) same as Main Table indexes while designing your schema as they also get Read/Write provisioning limits and are subject to hot partition throttling as well which back pressures on main table in other words if your GSI gets throttled then your main table will start throttling requests.
Will a single SGI partition key value limit performance in this project?
Single partition for complete table is definitely misuse of DDB scalable capability.
The goal is to evenly distribute partition keys while still being able to sort across all partition keys (I'm struggling with this part).
You can sort across partitions using GSI but you will again need partition key for your GSI and if that partition key is not distributed enough then you get into problems I mentioned above.
DDB is powerful for put/get operations if modeled right and for fairly simple queries with some filters. In general, you will utilize your throughput more efficiently as the ratio of partition key values accessed to the total number of partition key values in a table grows.
For your specific need its not directly possible to get scalable solution from DDB but we still have few options
Option 1:
We can model the data such that it is fairly distributed for writes and will need extra work while reading it back, this pattern is also known as Randomizing Across Multiple Partition Key Values. Since you don't want to access specific item for given time this will work for us.
Idea is to create fixed set (say 1 to 100) and randomly pick a number from it to append to creation date (not timestamp) and have creation timestamps as sort key.
This will distribute your load across multiple random partitions but increases the read complexity as you will need to query all partitions and merge to get final sort view for that date.
Option 2:
Use multiple tables for hot and cold data as it is time series based data. For info read
http://docs.aws.amazon.com/amazondynamodb/latest/developerguide/GuidelinesForTables.html#GuidelinesForTables.TimeSeriesDataAccessPatterns
Option 3:
Scan? Not a good choice if we talk about scalability and when your data grows but for fairly small set of data it surely helps so mentioning it.
These are just an example not saying a good fit for your usecase.
So here is a thought process question for you: write down all your use-cases and access patterns. Figure out their importance which are fine with eventual consistency which are not and see if DDB is good fit for them at first place, don't be tempted to use DDB and then struggling with access pattern scalability.
Also read https://stackoverflow.com/a/38790120/962545 for more questions you must be asking yourself before restricting yourself for specific access pattern you want from DDB.
Don't forget to read best practices: http://docs.aws.amazon.com/amazondynamodb/latest/developerguide/GuidelinesForTables.html
I am going to implement a notification system, and I am trying to figure out a good way to store notifications within a database. I have a web application that uses a PostgreSQL database, but a relational database does not seem ideal for this use case; I want to support various types of notifications, each including different data, though a subset of the data is common for all types of notifications. Therefore I was thinking that a NoSQL database is probably better than trying to normalize a schema in a relational database, as this would be quite tricky.
My application is hosted in Amazon Web Services (AWS), and I have been looking a bit at DynamoDB for storing the notifications. This is because it is managed, so I do not have to deal with the operations of it. Ideally, I'd like to have used MongoDB, but I'd really prefer not having to deal with the operations of the database myself. I have been trying to come up with a way to do what I want in DynamoDB, but I have been struggling, and therefore I have a few questions.
Suppose that I want to store the following data for each notification:
An ID
User ID of the receiver of the notification
Notification type
Timestamp
Whether or not it has been read/seen
Meta data about the notification/event (no querying necessary for this)
Now, I would like to be able to query for the most recent X notifications for a given user. Also, in another query, I'd like to fetch the number of unread notifications for a particular user. I am trying to figure out a way that I can index my table to be able to do this efficiently.
I can rule out simply having a hash primary key, as I would not be doing lookups by simply a hash key. I don't know if a "hash and range primary key" would help me here, as I don't know which attribute to put as the range key. Could I have a unique notification ID as the hash key and the user ID as the range key? Would that allow me to do lookups only by the range key, i.e. without providing the hash key? Then perhaps a secondary index could help me to sort by the timestamp, if this is even possible.
I also looked at global secondary indexes, but the problem with these are that when querying the index, DynamoDB can only return attributes that are projected into the index - and since I would want all attributes to be returned, then I would effectively have to duplicate all of my data, which seems rather ridiculous.
How can I index my notifications table to support my use case? Is it even possible, or do you have any other recommendations?
Motivation Note: When using a Cloud Storage like DynamoDB we have to be aware of the Storage Model because that will directly impact
your performance, scalability, and financial costs. It is different
than working with a local database because you pay not only for the
data that you store but also the operations that you perform against
the data. Deleting a record is a WRITE operation for example, so if
you don't have an efficient plan for clean up (and your case being
Time Series Data specially needs one), you will pay the price. Your
Data Model will not show problems when dealing with small data volume
but can definitely ruin your plans when you need to scale. That being
said, decisions like creating (or not) an index, defining proper
attributes for your keys, creating table segmentation, and etc will
make the entire difference down the road. Choosing DynamoDB (or more
generically speaking, a Key-Value store) as any other architectural
decision comes with a trade-off, you need to clearly understand
certain concepts about the Storage Model to be able to use the tool
efficiently, choosing the right keys is indeed important but only the
tip of the iceberg. For example, if you overlook the fact that you are
dealing with Time Series Data, no matter what primary keys or index
you define, your provisioned throughput will not be optimized because
it is spread throughout your entire table (and its partitions) and NOT
ONLY THE DATA THAT IS FREQUENTLY ACCESSED, meaning that unused data is
directly impacting your throughput just because it is part of the same
table. This leads to cases where the
ProvisionedThroughputExceededException is thrown "unexpectedly" when
you know for sure that your provisioned throughput should be enough for your
demand, however, the TABLE PARTITION that is being unevenly accessed
has reached its limits (more details here).
The post below has more details, but I wanted to give you some motivation to read through it and understand that although you can certainly find an easier solution for now, it might mean starting from the scratch in the near future when you hit a wall (the "wall" might come as high financial costs, limitations on performance and scalability, or a combination of all).
Q: Could I have a unique notification ID as the hash key and the user ID as the range key? Would that allow me to do lookups only by the range key, i.e. without providing the hash key?
A: DynamoDB is a Key-Value storage meaning that the most efficient queries use the entire Key (Hash or Hash-Range). Using the Scan operation to actually perform a query just because you don't have your Key is definitely a sign of deficiency in your Data Model in regards to your requirements. There are a few things to consider and many options to avoid this problem (more details below).
Now before moving on, I would suggest you reading this quick post to clearly understand the difference between Hash Key and Hash+Range Key:
DynamoDB: When to use what PK type?
Your case is a typical Time Series Data scenario where your records become obsolete as the time goes by. There are two main factors you need to be careful about:
Make sure your tables have even access patterns
If you put all your notifications in a single table and the most recent ones are accessed more frequently, your provisioned throughput will not be used efficiently.
You should group the most accessed items in a single table so the provisioned throughput can be properly adjusted for the required access. Additionally, make sure you properly define a Hash Key that will allow even distribution of your data across multiple partitions.
The obsolete data is deleted with the most efficient way (effort, performance and cost wise)
The documentation suggests segmenting the data in different tables so you can delete or backup the entire table once the records become obsolete (see more details below).
Here is the section from the documentation that explains best practices related to Time Series Data:
Understand Access Patterns for Time Series Data
For each table that you create, you specify the throughput
requirements. DynamoDB allocates and reserves resources to handle your
throughput requirements with sustained low latency. When you design
your application and tables, you should consider your application's
access pattern to make the most efficient use of your table's
resources.
Suppose you design a table to track customer behavior on your site,
such as URLs that they click. You might design the table with hash and
range type primary key with Customer ID as the hash attribute and
date/time as the range attribute. In this application, customer data
grows indefinitely over time; however, the applications might show
uneven access pattern across all the items in the table where the
latest customer data is more relevant and your application might
access the latest items more frequently and as time passes these items
are less accessed, eventually the older items are rarely accessed. If
this is a known access pattern, you could take it into consideration
when designing your table schema. Instead of storing all items in a
single table, you could use multiple tables to store these items. For
example, you could create tables to store monthly or weekly data. For
the table storing data from the latest month or week, where data
access rate is high, request higher throughput and for tables storing
older data, you could dial down the throughput and save on resources.
You can save on resources by storing "hot" items in one table with
higher throughput settings, and "cold" items in another table with
lower throughput settings. You can remove old items by simply deleting
the tables. You can optionally backup these tables to other storage
options such as Amazon Simple Storage Service (Amazon S3). Deleting an
entire table is significantly more efficient than removing items
one-by-one, which essentially doubles the write throughput as you do
as many delete operations as put operations.
Source:
http://docs.aws.amazon.com/amazondynamodb/latest/developerguide/GuidelinesForTables.html#GuidelinesForTables.TimeSeriesDataAccessPatterns
For example, You could have your tables segmented by month:
Notifications_April, Notifications_May, etc
Q: I would like to be able to query for the most recent X notifications for a given user.
A: I would suggest using the Query operation and querying using only the Hash Key (UserId) having the Range Key to sort the notifications by the Timestamp (Date and Time).
Hash Key: UserId
Range Key: Timestamp
Note: A better solution would be the Hash Key to not only have the UserId but also another concatenated information that you could calculate before querying to make sure your Hash Key grants you even access patterns to your data. For example, you can start to have hot partitions if notifications from specific users are more accessed than others... having an additional information in the Hash Key would mitigate this risk.
Q: I'd like to fetch the number of unread notifications for a particular user.
A: Create a Global Secondary Index as a Sparse Index having the UserId as the Hash Key and Unread as the Range Key.
Example:
Index Name: Notifications_April_Unread
Hash Key: UserId
Range Key : Unuread
When you query this index by Hash Key (UserId) you would automatically have all unread notifications with no unnecessary scans through notifications which are not relevant to this case. Keep in mind that the original Primary Key from the table is automatically projected into the index, so in case you need to get more information about the notification you can always resort to those attributes to perform a GetItem or BatchGetItem on the original table.
Note: You can explore the idea of using different attributes other than the 'Unread' flag, the important thing is to keep in mind that a Sparse Index can help you on this Use Case (more details below).
Detailed Explanation:
I would have a sparse index to make sure that you can query a reduced dataset to do the count. In your case you can have an attribute "unread" to flag if the notification was read or not, and use that attribute to create the Sparse Index. When the user reads the notification you simply remove that attribute from the notification so it doesn't show up in the index anymore. Here are some guidelines from the documentation that clearly apply to your scenario:
Take Advantage of Sparse Indexes
For any item in a table, DynamoDB will only write a corresponding
index entry if the index range key
attribute value is present in the item. If the range key attribute
does not appear in every table item, the index is said to be sparse.
[...]
To track open orders, you can create an index on CustomerId (hash) and
IsOpen (range). Only those orders in the table with IsOpen defined
will appear in the index. Your application can then quickly and
efficiently find the orders that are still open by querying the index.
If you had thousands of orders, for example, but only a small number
that are open, the application can query the index and return the
OrderId of each open order. Your application will perform
significantly fewer reads than it would take to scan the entire
CustomerOrders table. [...]
Instead of writing an arbitrary value into the IsOpen attribute, you
can use a different attribute that will result in a useful sort order
in the index. To do this, you can create an OrderOpenDate attribute
and set it to the date on which the order was placed (and still delete
the attribute once the order is fulfilled), and create the OpenOrders
index with the schema CustomerId (hash) and OrderOpenDate (range).
This way when you query your index, the items will be returned in a
more useful sort order.[...]
Such a query can be very efficient, because the number of items in the
index will be significantly fewer than the number of items in the
table. In addition, the fewer table attributes you project into the
index, the fewer read capacity units you will consume from the index.
Source:
http://docs.aws.amazon.com/amazondynamodb/latest/developerguide/GuidelinesForGSI.html#GuidelinesForGSI.SparseIndexes
Find below some references to the operations that you will need to programmatically create and delete tables:
Create Table
http://docs.aws.amazon.com/amazondynamodb/latest/APIReference/API_CreateTable.html
Delete Table
http://docs.aws.amazon.com/amazondynamodb/latest/APIReference/API_DeleteTable.html
I'm an active user of DynamoDB and here is what I would do... Firstly, I'm assuming that you need to access notifications individually (e.g. to mark them as read/seen), in addition to getting the latest notifications by user_id.
Table design:
NotificationsTable
id - Hash key
user_id
timestamp
...
UserNotificationsIndex (Global Secondary Index)
user_id - Hash key
timestamp - Range key
id
When you query the UserNotificationsIndex, you set the user_id of the user whose notifications you want and ScanIndexForward to false, and DynamoDB will return the notification ids for that user in reverse chronological order. You can optionally set a limit on how many results you want returned, or get a max of 1 MB.
With regards to projecting attributes, you'll either have to project the attributes you need into the index, or you can simply project the id and then write "hydrate" functionality in your code that does a look up on each ID and returns the specific fields that you need.
If you really don't like that, here is an alternate solution for you... Set your id as your timestamp. For example, I would use the # of milliseconds since a custom epoch (e.g. Jan 1, 2015). Here is an alternate table design:
NotificationsTable
user_id - Hash key
id/timestamp - Range key
Now you can query the NotificationsTable directly, setting the user_id appropriately and setting ScanIndexForward to false on the sort of the Range key. Of course, this assumes that you won't have a collision where a user gets 2 notifications in the same millisecond. This should be unlikely, but I don't know the scale of your system.
I want to run a MapReduce Job where I want to scan multiple columns from a given file and assign a unique ID(Index No.) to each distinct value for each column. The main challenge is to share the same ID for same value that is encountered on different node or different instances of Reducer.
Currently, I am using zookeeper for sharing the Unique IDs, but that is having its performance impact. I have even kept the information in local cache's at reducer level to avoid multiple trips to zookeeper for same value. I wanted to explore if there is any other better mechanism to do the same.
I can suggest two possible solutions for your problem
Create unique ID based on your value. This might be a hash function with low collision rate.
Use faster storage than ZooKeeper. You can try simple key value storage like Redis to store value to id mapping.
I'm rewriting an application which handles a lot of data (about 100 GB) which is designed as a relational model.
The application is very complex; it is some kind of conversion tool for open street map data of huge sizes (the whole world) and converts it into a map file for our own route planning software. The converter application for example holds the nodes in the open street map with their coordinate and all its tags (a lot of more than that, but this should serve as an example in this question).
Current situation:
Because this data is very huge, I split it into several files: Each file is a map from an ID to an atomic value (let's assume that the list of tags for a node is an atomic value; it is not but the data storage can treat it as such). So for nodes, I have a file holding the node's coords, one holding the node's name and one holding the node's tags, where the nodes are identified by (non-continuous) IDs.
The application once was split into several applications. Each application processes one step of the conversion. Therefore, such an application only needs to handle some of the data stored in the files. For example, not all applications need the node's tags, but a lot of them need the node's coords. This is why I split the relations into files, one file for each "column".
Each processing step can read a whole file at once into a data structure within RAM. This ensures that lookups can be very efficient (if the data structure is a hash map).
I'm currently rewriting the converter. It should now be one single application. And it should now not use separated files for each "column". It should rather use some well-known architecture to hold external data in a relational manner, like a database, but much faster.
=> Which library can provide the following features?
Requirements:
It needs to be very fast in iterating over the existing data (while not modifying the set of rows, but some values in the current row).
It needs to provide constant or near-constant lookup, similar to hash maps (while not modifying the whole relation at all).
Most of the types of the columns are constantly sized, but in general they are not.
It needs to be able to append new rows to a relation in constant or logarithmic time per row. Live-updating some kind of search index will not be required. Updating (rebuilding) the index can happen after a whole processing step is complete.
Some relations are key-value-based, while others are an (continuously indexed) array. Both of them should provide fast lookups.
It should NOT be a separate process, like a DBMS like MySQL would be. The number of queries will be enormous (around 10 billions) and will be totally the bottle neck of the performance. However, caching queries would be a possible workaround: Iterating over a whole table can be done in a single query while writing to a table (from which no data will be read in the same processing step) can happen in a batch query. But still: I guess that serializing, inter-process-transmitting and de-serializing SQL queries will be the bottle neck.
Nice-to-have: easy to use. It would be very nice if the relations can be used in a similar way than the C++ standard and Qt container classes.
Non-requirements (Why I don't need a DBMS):
Synchronizing writing and reading from/to the same relation. The application is split into multiple processing steps; every step has a set of "input relations" it reads from and "output relations" it writes into. However, some steps require to read some columns of a relation while writing in other columns of the same relation.
Joining relations. There are a few cross-references between different relations, however, they can be resolved within my application if lookup is fast enough.
Persistent storage. Once the conversion is done, all the data will not be required anymore.
The key-value-based relations will never be re-keyed; the array-based relations will never be re-indexed.
I can think of several possible solutions depending on lots of factors that you have not quantified in your question.
If you want a simple store to look things up and you have sufficient disk, SQLite is pretty efficient as a database. Note that there is no SQLite server, the 'server' is linked into your application.
Personally this job smacks of being embarrassingly parallel. I would think that a small Hadoop cluster would make quick work of the entire job. You could spin it up in AWS, process your data, and shut it down pretty inexpensively.