Xalan link failure using libraries built from source

Xalan link failure using libraries built from source - c++

I am upgrading one of our libraries to the latest version. The xalan from GitHub at https://github.com/apache/xalan-c. I was able to compile this library successfully using gcc 12. And when I ran make test command, it was all OK. But when used it in my code and it will fail when try to link, I got errors like this (I did check the library search path, both libxalan-c.so and libxalanMsg.so can be found by the ld):
g++ -g -O0 -Werror -Wunused -Wall -D__USE_XOPEN2K8 -D_REENTRANT -D__STL_PTHREADS -std=c++17 -pthread -Wno-parentheses -Wno-nonnull -pipe -lxerces-c -L/rapid/rapid_workspaces/chuhuan/GitHub/xalan-c/build/lib64/ -lxalan-c -lxalanMsg -Lxxxxxxxxx/TargetRTS/ -ldhf
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: linux/TargetRTS/ParamConfig.o: in function `dhf::DataHandlerFactory::initializeXMLLibs()':
xxxxxxxxx/DataHandlerFactory.hh:58: undefined reference to `xalanc_1_12::XalanTransformer::initialize(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DataHandlerFactory.hh:59: undefined reference to `xalanc_1_12::XPathEvaluator::initialize(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::transform(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
xxxxxxxxx/DOMImpl.cc:173: undefined reference to `xalanc_1_12::XercesParserLiaison::XercesParserLiaison(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:183: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(char16_t const*, xercesc_4_0::MemoryManager&, unsigned long)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:184: undefined reference to `xalanc_1_12::XercesDOMWrapperParsedSource::XercesDOMWrapperParsedSource(xercesc_4_0::DOMDocument const*, xalanc_1_12::XercesParserLiaison&, xalanc_1_12::XercesDOMSupport&, xalanc_1_12::XalanDOMString const&, xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:190: undefined reference to `xalanc_1_12::FormatterToXercesDOM::FormatterToXercesDOM(xercesc_4_0::DOMDocument*, xercesc_4_0::DOMElement*, xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:191: undefined reference to `xalanc_1_12::XalanTransformer::XalanTransformer(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:192: undefined reference to `xalanc_1_12::XSLTResultTarget::XSLTResultTarget(xalanc_1_12::FormatterListener&, xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:192: undefined reference to `xalanc_1_12::XSLTInputSource::XSLTInputSource(char const*, xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::get(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, double*)':
xxxxxxxxx/DOMImpl.cc:237: undefined reference to `xalanc_1_12::XercesParserLiaison::XercesParserLiaison(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:244: undefined reference to `xalanc_1_12::XercesParserLiaison::createDocument(xercesc_4_0::DOMDocument const*, bool, bool, bool)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:246: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(char const*, xercesc_4_0::MemoryManager&, unsigned long)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:248: undefined reference to `xalanc_1_12::XPathEvaluator::XPathEvaluator(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:250: undefined reference to `xalanc_1_12::XPathEvaluator::evaluate(xalanc_1_12::DOMSupport&, xalanc_1_12::XalanNode*, char16_t const*, xalanc_1_12::XalanElement const*)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::getSize(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int*)':
xxxxxxxxx/DOMImpl.cc:298: undefined reference to `xalanc_1_12::XercesParserLiaison::XercesParserLiaison(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:305: undefined reference to `xalanc_1_12::XercesParserLiaison::createDocument(xercesc_4_0::DOMDocument const*, bool, bool, bool)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:307: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(char const*, xercesc_4_0::MemoryManager&, unsigned long)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:309: undefined reference to `xalanc_1_12::XPathEvaluator::XPathEvaluator(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:313: undefined reference to `xalanc_1_12::XPathEvaluator::selectSingleNode(xalanc_1_12::DOMSupport&, xalanc_1_12::XalanNode*, char16_t const*, xalanc_1_12::XalanElement const*)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::get(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&)':
xxxxxxxxx/DOMImpl.cc:364: undefined reference to `xalanc_1_12::XercesParserLiaison::XercesParserLiaison(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:371: undefined reference to `xalanc_1_12::XercesParserLiaison::createDocument(xercesc_4_0::DOMDocument const*, bool, bool, bool)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:373: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(char const*, xercesc_4_0::MemoryManager&, unsigned long)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:375: undefined reference to `xalanc_1_12::XPathEvaluator::XPathEvaluator(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:377: undefined reference to `xalanc_1_12::XPathEvaluator::evaluate(xalanc_1_12::DOMSupport&, xalanc_1_12::XalanNode*, char16_t const*, xalanc_1_12::XalanElement const*)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::serialize(std::ostream&)':
xxxxxxxxx/DOMImpl.cc:486: undefined reference to `xalanc_1_12::XalanStdOutputStream::XalanStdOutputStream(std::ostream&, xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:490: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:490: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:490: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:490: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:490: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o):xxxxxxxxx/DOMImpl.cc:490: more undefined references to `xalanc_1_12::XalanDOMString::XalanDOMString(xercesc_4_0::MemoryManager&)' follow
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::serialize(std::ostream&)':
xxxxxxxxx/DOMImpl.cc:490: undefined reference to `xalanc_1_12::FormatterToXML::FormatterToXML(xalanc_1_12::Writer&, xalanc_1_12::XalanDOMString const&, bool, int, xalanc_1_12::XalanDOMString const&, xalanc_1_12::XalanDOMString const&, xalanc_1_12::XalanDOMString const&, xalanc_1_12::XalanDOMString const&, bool, xalanc_1_12::XalanDOMString const&, xalanc_1_12::FormatterListener::eFormat, bool, xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:501: undefined reference to `xalanc_1_12::XercesDOMWalker::traverse(xercesc_4_0::DOMNode*)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/TargetRTS//libdhf.a(DOMImpl.o): in function `dhf::DOMImpl::selectNode(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
xxxxxxxxx/DOMImpl.cc:510: undefined reference to `xalanc_1_12::XercesParserLiaison::XercesParserLiaison(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:517: undefined reference to `xalanc_1_12::XercesParserLiaison::createDocument(xercesc_4_0::DOMDocument const*, bool, bool, bool)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:522: undefined reference to `xalanc_1_12::XalanDOMString::XalanDOMString(char const*, xercesc_4_0::MemoryManager&, unsigned long)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:527: undefined reference to `xalanc_1_12::XPathEvaluator::XPathEvaluator(xercesc_4_0::MemoryManager&)'
xxxxxxxxxgcc-12.2.0/../binutils-2.36.1/bin/ld: xxxxxxxxx/DOMImpl.cc:528: undefined reference to `xalanc_1_12::XPathEvaluator::selectSingleNode(xalanc_1_12::DOMSupport&, xalanc_1_12::XalanNode*, char16_t const*, xalanc_1_12::XalanElement const*)'
collect2: error: ld returned 1 exit status
my cmake options:
CC=gcc-12.2.0/bin/gcc CXX=gcc-12.2.0/bin/g++ CFLAGS=-O3 CXXFLAGS=-O3 cmake -G "Unix Makefiles" -DCMAKE_INSTALL_PREFIX=xalan-c/build -DCMAKE_BUILD_TYPE=Release -Dmessage-loader=inmemory -Dtranscoder=default xalan-c
It seems something may be inconsistent with my build options, any idea to fix this?
Thanks very much!
Chunde

Eventually figured out the issue, this was because Xalan need to link to Xercesc, without specifying the path to the version 4.0.0 of Xercesc, it will link to the default version at system path. So I used
-DCMAKE_PREFIX_PATH
variable to set that, the new cmake command looks like this:
CC=gcc-12.2.0/bin/gcc CXX=gcc-12.2.0/bin/g++ CFLAGS=-O3 CXXFLAGS=-O3 cmake -DCMAKE_PREFIX_PATH=xxx/xerces-c_4.0.0/ -G "Unix Makefiles" -DCMAKE_INSTALL_PREFIX=xalan-c/build -DCMAKE_BUILD_TYPE=Release -Dmessage-loader=inmemory -Dtranscoder=default xalan-c

Related

trying to compile static libmysqlcppconn8-static.a on Ubuntu 18.04.6 LTS

After looking ant trying all links on the web i just can't figure what is wrong.
g++ version :
g++ (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0
This is my compilation line :
/usr/bin/g++ -fdiagnostics-color=always -Wall -std=c++11 -DSTATIC_CONCPP -I/home/vagrant/cpp/mysql-connector-cpp/include/ -I/home/vagrant/cpp/mysql-connector-cpp/include/mysqlx/ -I/home/vagrant/cpp/mysql-connector-cpp/common/ -I/home/vagrant/cpp/boost/ -I/home/vagrant/cpp/mysql-connector-cpp/build/cdk/protocol/mysqlx/protobuf -g /home/vagrant/cpp/mysql_conn_app/main.cpp /home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a -lssl -lcrypto -lpthread -lresolv -o /home/vagrant/cpp/mysql_conn_app/main.exe
This is the error:
/tmp/ccUnnhKN.o: In function `mysqlx::abi2::r0::string::traits<char>::from_str(mysqlx::abi2::r0::string&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)':
/home/vagrant/cpp/mysql-connector-cpp/include/mysqlx/devapi/common.h:220: undefined reference to `mysqlx::abi2::r0::string::Impl::from_utf8(mysqlx::abi2::r0::string&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/tmp/ccUnnhKN.o: In function `mysqlx::abi2::r0::string::traits<char>::to_str[abi:cxx11](mysqlx::abi2::r0::string const&)':
/home/vagrant/cpp/mysql-connector-cpp/include/mysqlx/devapi/common.h:225: undefined reference to `mysqlx::abi2::r0::string::Impl::to_utf8[abi:cxx11](mysqlx::abi2::r0::string const&)'
/tmp/ccUnnhKN.o: In function `mysqlx::abi2::r0::SessionSettings::SessionSettings(mysqlx::abi2::r0::string const&)':
/home/vagrant/cpp/mysql-connector-cpp/include/mysqlx/devapi/settings.h:526: undefined reference to `mysqlx::abi2::r0::common::Settings_impl::set_from_uri(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::log_handler_init()':
./build/cdk/protocol/mysqlx/./cdk/protocol/mysqlx/protocol.cc:131: undefined reference to `google::protobuf::SetLogHandler(void (*)(google::protobuf::LogLevel, char const*, int, std::string const&))'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Protocol_server::snd_Ok(cdk::foundation::string const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx.pb.h:947: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Protocol_server::snd_Error(unsigned short, cdk::foundation::string
....
what is wrong here ?
also when adding "-D_GLIBCXX_USE_CXX11_ABI=0" as suggested here:
still not working
/usr/bin/g++ -fdiagnostics-color=always -Wall -std=c++11 -D_GLIBCXX_USE_CXX11_ABI=0 -DSTATIC_CONCPP -I/home/vagrant/cpp/mysql-connector-cpp/include/ -I/home/vagrant/cpp/mysql-connector-cpp/include/mysqlx/ -I/home/vagrant/cpp/mysql-connector-cpp/common/ -I/home/vagrant/cpp/boost/ -I/home/vagrant/cpp/mysql-connector-cpp/build/cdk/protocol/mysqlx/protobuf -g /home/vagrant/cpp/mysql_conn_app/main.cpp /home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a -lssl -lcrypto -lpthread -lresolv -o /home/vagrant/cpp/mysql_conn_app/main.exe
gives :
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::log_handler_init()':
./build/cdk/protocol/mysqlx/./cdk/protocol/mysqlx/protocol.cc:131: undefined reference to `google::protobuf::SetLogHandler(void (*)(google::protobuf::LogLevel, char const*, int, std::string const&))'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Protocol_server::snd_Ok(cdk::foundation::string const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx.pb.h:947: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Protocol_server::snd_Error(unsigned short, cdk::foundation::string const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx.pb.h:1146: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Expr_builder_base::set_call(cdk::protocol::mysqlx::api::Db_obj const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx_expr.pb.h:2562: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
adding protobuf + -D_GLIBCXX_USE_CXX11_ABI=0 same error:
/usr/bin/g++ -fdiagnostics-color=always -Wall -std=c++11 -D_GLIBCXX_USE_CXX11_ABI=0 -DSTATIC_CONCPP -I/home/vagrant/cpp/mysql-connector-cpp/include/ -I/home/vagrant/cpp/mysql-connector-cpp/include/mysqlx/ -I/home/vagrant/cpp/mysql-connector-cpp/common/ -I/home/vagrant/cpp/boost/ -I/home/vagrant/cpp/mysql-connector-cpp/build/cdk/protocol/mysqlx/protobuf -g /home/vagrant/cpp/mysql_conn_app/main.cpp /home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a /home/vagrant/cpp/mysql-connector-cpp/build/cdk/protocol/mysqlx/protobuf/protobuf-3.19.4/cmake/libprotobufd.a /home/vagrant/cpp/mysql-connector-cpp/build/cdk/protocol/mysqlx/protobuf/protobuf-3.19.4/cmake/libprotobuf-lited.a /home/vagrant/cpp/mysql-connector-cpp/build/cdk/protocol/mysqlx/protobuf/protobuf-3.19.4/cmake/libprotocd.a -lssl -lcrypto -lpthread -lresolv -o /home/vagrant/cpp/mysql_conn_app/main.exe
gives :
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::log_handler_init()':
./build/cdk/protocol/mysqlx/./cdk/protocol/mysqlx/protocol.cc:131: undefined reference to `google::protobuf::SetLogHandler(void (*)(google::protobuf::LogLevel, char const*, int, std::string const&))'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Protocol_server::snd_Ok(cdk::foundation::string const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx.pb.h:947: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Protocol_server::snd_Error(unsigned short, cdk::foundation::string const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx.pb.h:1146: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Expr_builder_base::set_call(cdk::protocol::mysqlx::api::Db_obj const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx_expr.pb.h:2562: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx_expr.pb.h:2631: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `cdk::protocol::mysqlx::Expr_builder_base::var(cdk::foundation::string const&)':
./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx_expr.pb.h:2013: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)'
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o):./build/cdk/protocol/mysqlx/./build/cdk/protocol/mysqlx/protobuf/mysqlx_expr.pb.h:2874: more undefined references to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string&&, google::protobuf::Arena*)' follow
/home/vagrant/cpp/mysql-connector-cpp/build/libmysqlcppconn8-static.a(libcdk_proto_mysqlx_protocol.cc.o): In function `void google::protobuf::internal::ArenaStringPtr::Set<google::protobuf::internal::ArenaStringPtr::EmptyDefault>(google::protobuf::internal::ArenaStringPtr::EmptyDefault, char const*, google::protobuf::Arena*)':
./build/cdk/protocol/mysqlx/./cdk/extra/protobuf/protobuf-3.19.4/src/google/protobuf/arenastring.h:200: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::string const&, google::protobuf::Arena*)'

/usr/bin/ld: cannot find -lprotobuf

I am new to linux and c++. I am trying to run veins gym on Ubuntu-18.04. When I run snakemake -jall (see the link) I receive an error:
make: Entering directory '/home/rost/serpentine-env/src'
Creating executable: out/gcc-debug//experiment_dbg
/usr/bin/ld: cannot find -lprotobuf
collect2: error: ld returned 1 exit status
Makefile:96: recipe for target 'out/gcc-debug//experiment_dbg' failed
make: *** [out/gcc-debug//experiment_dbg] Error 1
make: Leaving directory '/home/rost/serpentine-env/src'
[Thu Dec 30 12:34:46 2021]
Error in rule build:
jobid: 1
output: src/experiment_dbg
shell:
make -j8 -C src MODE=debug
(one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)
Shutting down, this might take some time.
Exiting because a job execution failed. Look above for error message
Complete log: /home/rost/serpentine-env/.snakemake/log/2021-12-30T123446.742985.snakemake.log
To obtain a little more information, I run (source)
ld -lprotobuf --verbose
and I get
attempt to open //usr/local/lib/x86_64-linux-gnu/libprotobuf.so failed
attempt to open //usr/local/lib/x86_64-linux-gnu/libprotobuf.a failed
attempt to open //lib/x86_64-linux-gnu/libprotobuf.so failed
attempt to open //lib/x86_64-linux-gnu/libprotobuf.a failed
attempt to open //usr/lib/x86_64-linux-gnu/libprotobuf.so failed
attempt to open //usr/lib/x86_64-linux-gnu/libprotobuf.a failed
attempt to open //usr/lib/x86_64-linux-gnu64/libprotobuf.so failed
attempt to open //usr/lib/x86_64-linux-gnu64/libprotobuf.a failed
attempt to open //usr/local/lib64/libprotobuf.so failed
attempt to open //usr/local/lib64/libprotobuf.a failed
attempt to open //lib64/libprotobuf.so failed
attempt to open //lib64/libprotobuf.a failed
attempt to open //usr/lib64/libprotobuf.so failed
attempt to open //usr/lib64/libprotobuf.a failed
attempt to open //usr/local/lib/libprotobuf.so failed
attempt to open //usr/local/lib/libprotobuf.a failed
attempt to open //lib/libprotobuf.so failed
attempt to open //lib/libprotobuf.a failed
attempt to open //usr/lib/libprotobuf.so failed
attempt to open //usr/lib/libprotobuf.a failed
attempt to open //usr/x86_64-linux-gnu/lib64/libprotobuf.so failed
attempt to open //usr/x86_64-linux-gnu/lib64/libprotobuf.a failed
attempt to open //usr/x86_64-linux-gnu/lib/libprotobuf.so failed
attempt to open //usr/x86_64-linux-gnu/lib/libprotobuf.a failed
ld: cannot find -lprotobuf
I guess, I would have to make symlink manually, but I do not find any .so files in the archives from protobuf. Or maybe my interpretation is wrong. If some information is missing - I will provide.
Thank you!
UPDATE:
after runningsudo apt install libprotobuf-dev, command snakemake -jall produces
make: Entering directory '/home/rost/serpentine-env/src'
Creating executable: out/gcc-debug//experiment_dbg
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:563: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:571: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:579: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:593: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:644: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:690: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Request::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:757: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:946: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:954: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:962: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:976: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1027: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1073: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Reply::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1140: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::Init(veinsgym::proto::Init const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1166: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1174: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1182: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::Clear()':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1233: undefined reference to `google::protobuf::internal::ArenaStringPtr::ClearToEmpty()'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1234: undefined reference to `google::protobuf::internal::ArenaStringPtr::ClearToEmpty()'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1235: undefined reference to `google::protobuf::internal::ArenaStringPtr::ClearToEmpty()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1249: undefined reference to `google::protobuf::internal::InlineGreedyStringParser(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, char const*, google::protobuf::internal::ParseContext*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1259: undefined reference to `google::protobuf::internal::InlineGreedyStringParser(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, char const*, google::protobuf::internal::ParseContext*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1269: undefined reference to `google::protobuf::internal::InlineGreedyStringParser(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, char const*, google::protobuf::internal::ParseContext*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1284: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1335: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1371: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::MergeFrom(veinsgym::proto::Init const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.h:2983: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.h:3034: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.h:3085: undefined reference to `google::protobuf::internal::ArenaStringPtr::Set(google::protobuf::internal::ArenaStringPtr::EmptyDefault, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, google::protobuf::Arena*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Init::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1441: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Shutdown::Shutdown(veinsgym::proto::Shutdown const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1456: undefined reference to `google::protobuf::internal::ZeroFieldsBase::~ZeroFieldsBase()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Shutdown::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1480: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1580: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1588: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1602: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1639: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1668: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Step::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1724: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:1992: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2000: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2008: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2016: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2024: undefined reference to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)'
out/gcc-debug//protobuf/veinsgym.pb.o:/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2032: more undefined references to `google::protobuf::internal::ParseContext::ParseMessage(google::protobuf::MessageLite*, char const*)' follow
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2046: undefined reference to `google::protobuf::internal::UnknownFieldParse(unsigned long, google::protobuf::UnknownFieldSet*, char const*, google::protobuf::internal::ParseContext*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::_InternalSerialize(unsigned char*, google::protobuf::io::EpsCopyOutputStream*) const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2115: undefined reference to `google::protobuf::internal::WireFormat::InternalSerializeUnknownFieldsToArray(google::protobuf::UnknownFieldSet const&, unsigned char*, google::protobuf::io::EpsCopyOutputStream*)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::ByteSizeLong() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2177: undefined reference to `google::protobuf::Message::MaybeComputeUnknownFieldsSize(unsigned long, google::protobuf::internal::CachedSize*) const'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Space::GetMetadata() const':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2252: undefined reference to `google::protobuf::internal::AssignDescriptors(google::protobuf::internal::DescriptorTable const* (*)(), std::once_flag*, google::protobuf::Metadata const&)'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::Box(google::protobuf::Arena*, bool)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2264: undefined reference to `google::protobuf::RepeatedField<double>::RepeatedField(google::protobuf::Arena*)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2264: undefined reference to `google::protobuf::RepeatedField<double>::~RepeatedField()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::Box(veinsgym::proto::Box const&)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2273: undefined reference to `google::protobuf::RepeatedField<double>::RepeatedField(google::protobuf::RepeatedField<double> const&)'
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2273: undefined reference to `google::protobuf::RepeatedField<double>::~RepeatedField()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::~Box()':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2281: undefined reference to `google::protobuf::RepeatedField<double>::~RepeatedField()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::Clear()':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2308: undefined reference to `google::protobuf::RepeatedField<double>::Clear()'
out/gcc-debug//protobuf/veinsgym.pb.o: In function `veinsgym::proto::Box::_InternalParse(char const*, google::protobuf::internal::ParseContext*)':
/home/rost/serpentine-env/src/protobuf/veinsgym.pb.cc:2321: undefined reference to `google::protobuf::internal::PackedDoubleParser(void*, char const*, google::protobuf::internal::ParseContext*)'
...
/home/rost/serpentine-env/src/./protobuf/veinsgym.pb.h:780: undefined reference to `google::protobuf::internal::ZeroFieldsBase::InternalSwap(google::protobuf::internal::ZeroFieldsBase*)'
out/gcc-debug//serpentine/GymSplitter.o: In function `veinsgym::proto::Shutdown::CopyFrom(veinsgym::proto::Shutdown const&)':
/home/rost/serpentine-env/src/./protobuf/veinsgym.pb.h:835: undefined reference to `google::protobuf::internal::ZeroFieldsBase::CopyImpl(google::protobuf::Message*, google::protobuf::Message const&)'
out/gcc-debug//serpentine/GymSplitter.o: In function `veinsgym::proto::Box::set_values(int, double)':
/home/rost/serpentine-env/src/./protobuf/veinsgym.pb.h:3778: undefined reference to `google::protobuf::RepeatedField<double>::Set(int, double const&)'
out/gcc-debug//serpentine/GymSplitter.o: In function `void google::protobuf::RepeatedField<double>::Add<double const*>(double const*, double const*)':
/usr/local/include/google/protobuf/repeated_field.h:705: undefined reference to `google::protobuf::RepeatedField<double>::size() const'
/usr/local/include/google/protobuf/repeated_field.h:712: undefined reference to `google::protobuf::RepeatedField<double>::elements() const'
/usr/local/include/google/protobuf/repeated_field.h:712: undefined reference to `google::protobuf::RepeatedField<double>::size() const'
/usr/local/include/google/protobuf/repeated_field.h:713: undefined reference to `google::protobuf::RepeatedField<double>::size() const'
out/gcc-debug//serpentine/GymSplitter.o: In function `google::protobuf::RepeatedField<double>::FastAdderImpl<0, true>::FastAdderImpl(google::protobuf::RepeatedField<double>*)':
/usr/local/include/google/protobuf/repeated_field.h:448: undefined reference to `google::protobuf::RepeatedField<double>::unsafe_elements() const'
out/gcc-debug//serpentine/GymSplitter.o: In function `google::protobuf::RepeatedField<double>::FastAdderImpl<0, true>::Add(double)':
/usr/local/include/google/protobuf/repeated_field.h:457: undefined reference to `google::protobuf::RepeatedField<double>::unsafe_elements() const'
collect2: error: ld returned 1 exit status
Makefile:96: recipe for target 'out/gcc-debug//experiment_dbg' failed
make: *** [out/gcc-debug//experiment_dbg] Error 1
make: Leaving directory '/home/rost/serpentine-env/src'

unable to run mpicc in linux

My code was working fine on windows, now that I am trying to compile on ubuntu 20.4; I am getting this error; I am copying part of the error as there are a lot:
after runing : mpicc C.cpp -o C
usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xb8): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_capacity(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xc4): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_data() const'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xda): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_copy_chars(char*, char*, char*)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xed): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_set_length(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x10b): undefined reference to `__cxa_begin_catch'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x117): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x11c): undefined reference to `__cxa_rethrow'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x128): undefined reference to `__cxa_end_catch'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::deallocate(int*, unsigned long)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim[_ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim]+0x20): undefined reference to `operator delete(void*)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::allocate(unsigned long, void const*)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x30): undefined reference to `std::__throw_bad_alloc()'
/usr/bin/ld: C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x40): undefined reference to `operator new(unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o:(.data.rel.ro._ZTVN3MPI3WinE[_ZTVN3MPI3WinE]+0x48): undefined reference to `MPI::Win::Free()'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Intercomm::~Intercomm()':
C.cpp:(.text._ZN3MPI9IntercommD0Ev[_ZN3MPI9IntercommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Graphcomm::~Graphcomm()':
C.cpp:(.text._ZN3MPI9GraphcommD0Ev[_ZN3MPI9GraphcommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Cartcomm::~Cartcomm()':
when I check mpirun --version: I get this : mpirun (Open MPI) 4.0.3

This error:
usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xb8): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_capacity(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xc4): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_data() const'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xda): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_copy_chars(char*, char*, char*)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0xed): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_set_length(unsigned long)'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x10b): undefined reference to `__cxa_begin_catch'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x117): undefined reference to `std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_dispose()'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x11c): undefined reference to `__cxa_rethrow'
/usr/bin/ld: C.cpp:(.text._ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag[_ZNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEE12_M_constructIPcEEvT_S7_St20forward_iterator_tag]+0x128): undefined reference to `__cxa_end_catch'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::deallocate(int*, unsigned long)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim[_ZN9__gnu_cxx13new_allocatorIiE10deallocateEPim]+0x20): undefined reference to `operator delete(void*)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `__gnu_cxx::new_allocator<int>::allocate(unsigned long, void const*)':
C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x30): undefined reference to `std::__throw_bad_alloc()'
/usr/bin/ld: C.cpp:(.text._ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv[_ZN9__gnu_cxx13new_allocatorIiE8allocateEmPKv]+0x40): undefined reference to `operator new(unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o:(.data.rel.ro._ZTVN3MPI3WinE[_ZTVN3MPI3WinE]+0x48): undefined reference to `MPI::Win::Free()'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Intercomm::~Intercomm()':
C.cpp:(.text._ZN3MPI9IntercommD0Ev[_ZN3MPI9IntercommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Graphcomm::~Graphcomm()':
C.cpp:(.text._ZN3MPI9GraphcommD0Ev[_ZN3MPI9GraphcommD5Ev]+0x29): undefined reference to `operator delete(void*, unsigned long)'
/usr/bin/ld: /tmp/ccNx3sbm.o: in function `MPI::Cartcomm::~Cartcomm()':
Because you are compiling with mpicc:
Compiles and links MPI programs written in C
but you should be using in this case mpic++
mpic++ -- Open MPI C++ wrapper compiler

C++ compilation error undefined reference to log4cplus and boost

Context
I have pulled code from the concord repo at https://github.com/vmware/concord. I managed to build the docker images fine.
In the documentation at https://concord.readthedocs.io/en/latest/deployment/deployment.html#confguration-file-generator they mention a configuration file generator that is used to generate configuration files which is required to run a concord node using docker run (the command to run the concord node is defined at https://concord.readthedocs.io/en/latest/deployment/deployment.html#concord-nodes). This configuration file generator is a .cpp called conc_genconfig.cpp (available at https://github.com/vmware/concord/blob/master/tools/conc_genconfig.cpp) and requires a .yml as an input. This uses library files from log4cplus and boost. I installed these by looking at the Dockerfile under the builder folder (available at https://github.com/vmware/concord/blob/master/docker/dockerfiles/builder/Dockerfile)
Problem
When I compile conc_genconfig.cpp using the following command:
g++ -Wall -g -std=c++11 -LLIBDIR -I /home/ubuntu/concord/src -I /home/ubuntu/concord-bft/threshsign/include/threshsign conc_genconfig.cpp
I get the following output/compilation errors:
In file included from conc_genconfig.cpp:23:0:
/home/ubuntu/concord/src/config/configuration_manager.hpp:1547:23: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
kPositiveIntLimits({1, INT_MAX});
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1549:26: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
kPositiveUInt16Limits({1, UINT16_MAX});
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1551:26: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
kPositiveUInt64Limits({1, UINT64_MAX});
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1553:29: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
kPositiveULongLongLimits({1, ULLONG_MAX});
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1554:77: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
inline const std::pair<unsigned long long, unsigned long long> kUInt16Limits(
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1556:77: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
inline const std::pair<unsigned long long, unsigned long long> kUInt32Limits(
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1558:77: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
inline const std::pair<unsigned long long, unsigned long long> kUInt64Limits(
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1560:58: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
inline const std::pair<long long, long long> kInt32Limits({INT32_MIN,
^
/home/ubuntu/concord/src/config/configuration_manager.hpp:1566:45: warning: inline variables are only available with -std=c++1z or -std=gnu++1z
kConcordBFTCommunicationBufferSizeLimits({512, UINT32_MAX});
^
/tmp/cc2pIDGw.o: In function `main':
/home/ubuntu/concord/tools/conc_genconfig.cpp:44: undefined reference to `log4cplus::initialize()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:45: undefined reference to `log4cplus::Logger::getDefaultHierarchy()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:45: undefined reference to `log4cplus::BasicConfigurator::BasicConfigurator(log4cplus::Hierarchy&, bool)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:46: undefined reference to `log4cplus::PropertyConfigurator::configure()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:48: undefined reference to `log4cplus::Logger::getInstance(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:54: undefined reference to `boost::program_options::variables_map::variables_map()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:55: undefined reference to `boost::program_options::options_description::m_default_line_length'
/home/ubuntu/concord/tools/conc_genconfig.cpp:55: undefined reference to `boost::program_options::options_description::m_default_line_length'
/home/ubuntu/concord/tools/conc_genconfig.cpp:55: undefined reference to `boost::program_options::options_description::options_description(unsigned int, unsigned int)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:58: undefined reference to `boost::program_options::options_description::add_options()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:59: undefined reference to `boost::program_options::options_description_easy_init::operator()(char const*, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:63: undefined reference to `boost::program_options::options_description_easy_init::operator()(char const*, boost::program_options::value_semantic const*, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:70: undefined reference to `boost::program_options::options_description_easy_init::operator()(char const*, boost::program_options::value_semantic const*, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:71: undefined reference to `boost::program_options::options_description_easy_init::operator()(char const*, boost::program_options::value_semantic const*, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:85: undefined reference to `boost::program_options::store(boost::program_options::basic_parsed_options<char> const&, boost::program_options::variables_map&, bool)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:92: undefined reference to `boost::program_options::operator<<(std::ostream&, boost::program_options::options_description const&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:95: undefined reference to `boost::program_options::notify(boost::program_options::variables_map&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:97: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:97: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:97: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:100: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:100: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:100: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:108: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:108: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:108: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:114: undefined reference to `concord::config::YAMLConfigurationInput::YAMLConfigurationInput(std::istream&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:116: undefined reference to `concord::config::YAMLConfigurationInput::parseInput()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:129: undefined reference to `concord::config::ConcordConfiguration::ConcordConfiguration()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:130: undefined reference to `concord::config::specifyConfiguration(concord::config::ConcordConfiguration&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:131: undefined reference to `concord::config::ConcordConfiguration::setConfigurationStateLabel(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:134: undefined reference to `concord::config::loadClusterSizeParameters(concord::config::YAMLConfigurationInput&, concord::config::ConcordConfiguration&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:141: undefined reference to `concord::config::instantiateTemplatedConfiguration(concord::config::YAMLConfigurationInput&, concord::config::ConcordConfiguration&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:150: undefined reference to `concord::config::loadConfigurationInputParameters(concord::config::YAMLConfigurationInput&, concord::config::ConcordConfiguration&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:156: undefined reference to `concord::config::ConcordConfiguration::loadAllDefaults(bool, bool)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:158: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:158: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:158: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:164: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:164: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:164: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:167: undefined reference to `concord::config::generateConfigurationKeys(concord::config::ConcordConfiguration&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:168: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:168: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:168: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:177: undefined reference to `concord::config::ConcordConfiguration::generateAll(bool, bool)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:179: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:179: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:179: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:185: undefined reference to `concord::config::ConcordConfiguration::scopeIsInstantiated(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:186: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:186: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:186: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:192: undefined reference to `concord::config::ConcordConfiguration::validateAll(bool, bool)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:194: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:194: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:194: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:199: undefined reference to `concord::config::hasAllParametersRequiredAtConfigurationGeneration(concord::config::ConcordConfiguration&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:200: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:200: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:200: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:205: undefined reference to `concord::config::ConcordConfiguration::scopeSize(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:210: undefined reference to `concord::config::YAMLConfigurationOutput::YAMLConfigurationOutput(std::ostream&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:212: undefined reference to `concord::config::outputConcordNodeConfiguration(concord::config::ConcordConfiguration const&, concord::config::YAMLConfigurationOutput&, unsigned long)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:222: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:222: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:222: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:222: undefined reference to `concord::config::YAMLConfigurationOutput::~YAMLConfigurationOutput()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:231: undefined reference to `concord::config::outputPrincipalLocationsMappingJSON(concord::config::ConcordConfiguration&, std::ostream&)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:241: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:241: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:241: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:129: undefined reference to `concord::config::ConcordConfiguration::~ConcordConfiguration()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:114: undefined reference to `concord::config::YAMLConfigurationInput::~YAMLConfigurationInput()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:48: undefined reference to `log4cplus::Logger::~Logger()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:45: undefined reference to `log4cplus::BasicConfigurator::~BasicConfigurator()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:118: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:118: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:118: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:124: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:124: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:124: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:136: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:136: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:136: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:143: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:143: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:143: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:152: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:152: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:152: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:170: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:170: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:170: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:173: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:173: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:173: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:214: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:214: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:214: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:218: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:218: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:218: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:210: undefined reference to `concord::config::YAMLConfigurationOutput::~YAMLConfigurationOutput()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:233: undefined reference to `log4cplus::Logger::isEnabledFor(int) const'
/home/ubuntu/concord/tools/conc_genconfig.cpp:233: undefined reference to `log4cplus::detail::get_macro_body_oss[abi:cxx11]()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:233: undefined reference to `log4cplus::detail::macro_forced_log(log4cplus::Logger const&, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, char const*, int, char const*)'
/home/ubuntu/concord/tools/conc_genconfig.cpp:129: undefined reference to `concord::config::ConcordConfiguration::~ConcordConfiguration()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:114: undefined reference to `concord::config::YAMLConfigurationInput::~YAMLConfigurationInput()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:48: undefined reference to `log4cplus::Logger::~Logger()'
/home/ubuntu/concord/tools/conc_genconfig.cpp:45: undefined reference to `log4cplus::BasicConfigurator::~BasicConfigurator()'
/tmp/cc2pIDGw.o: In function `boost::program_options::value_semantic_codecvt_helper<char>::value_semantic_codecvt_helper()':
/usr/include/boost/program_options/value_semantic.hpp:91: undefined reference to `vtable for boost::program_options::value_semantic_codecvt_helper<char>'
/tmp/cc2pIDGw.o: In function `boost::program_options::value_semantic_codecvt_helper<char>::~value_semantic_codecvt_helper()':
/usr/include/boost/program_options/value_semantic.hpp:91: undefined reference to `vtable for boost::program_options::value_semantic_codecvt_helper<char>'
/tmp/cc2pIDGw.o: In function `boost::program_options::basic_command_line_parser<char>::basic_command_line_parser(int, char const* const*)':
/usr/include/boost/program_options/detail/parsers.hpp:44: undefined reference to `boost::program_options::detail::cmdline::cmdline(std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&)'
/tmp/cc2pIDGw.o: In function `boost::program_options::basic_command_line_parser<char>::options(boost::program_options::options_description const&)':
/usr/include/boost/program_options/detail/parsers.hpp:52: undefined reference to `boost::program_options::detail::cmdline::set_options_description(boost::program_options::options_description const&)'
/tmp/cc2pIDGw.o: In function `boost::program_options::basic_command_line_parser<char>::run()':
/usr/include/boost/program_options/detail/parsers.hpp:108: undefined reference to `boost::program_options::detail::cmdline::get_canonical_option_prefix()'
/usr/include/boost/program_options/detail/parsers.hpp:109: undefined reference to `boost::program_options::detail::cmdline::run()'
/tmp/cc2pIDGw.o: In function `std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > boost::program_options::to_internal<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >(std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&)':
/usr/include/boost/program_options/detail/convert.hpp:79: undefined reference to `boost::program_options::to_internal(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)'
/tmp/cc2pIDGw.o:(.data.rel.ro._ZTVN5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcEE[_ZTVN5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcEE]+0x38): undefined reference to `boost::program_options::value_semantic_codecvt_helper<char>::parse(boost::any&, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&, bool) const'
/tmp/cc2pIDGw.o:(.data.rel.ro._ZTIN5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcEE[_ZTIN5boost15program_options11typed_valueINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEcEE]+0x18): undefined reference to `typeinfo for boost::program_options::value_semantic_codecvt_helper<char>'
/tmp/cc2pIDGw.o: In function `boost::program_options::variables_map::~variables_map()':
/usr/include/boost/program_options/variables_map.hpp:146: undefined reference to `vtable for boost::program_options::variables_map'
/tmp/cc2pIDGw.o: In function `boost::program_options::typed_value<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, char>::name() const':
/usr/include/boost/program_options/detail/value_semantic.hpp:22: undefined reference to `boost::program_options::arg[abi:cxx11]'
/tmp/cc2pIDGw.o: In function `boost::program_options::typed_value<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, char>::xparse(boost::any&, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&) const':
/usr/include/boost/program_options/detail/value_semantic.hpp:184: undefined reference to `boost::program_options::validate(boost::any&, std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > > const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >*, int)'
collect2: error: ld returned 1 exit status
Versions and OS
I am using: Ubuntu 18.04.3 LTS
gcc version: gcc (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0
g++ version: g++ (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0
libboost version: Version: 1.65.1.0ubuntu1
Environment variables
I have set LD_LIBRARY_PATH to /usr/local/lib. This is where log4cplus libraries have been built.
I apologise if this question is not clear. Please let me know if that is the case so I can improve my question. If anyone can, please add the tag 'concord' to the question.

undefined reference errors when I add boost log dependecies

I am trying to add boost logging functionality.
But I've got a lot of errors with undefined reference.
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(core.o): In function `boost::thread_specific_ptr<boost::log::v2s_mt_nt5::core::implementation::thread_data>::~thread_specific_ptr()':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:79: undefined reference to `boost::detail::set_tss_data(void const*, boost::shared_ptr<boost::detail::tss_cleanup_function>, void*, bool)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(core.o): In function `boost::thread_specific_ptr<boost::log::v2s_mt_nt5::core::implementation::thread_data>::get() const':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:84: undefined reference to `boost::detail::get_tss_data(void const*)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(core.o): In function `boost::thread_specific_ptr<boost::log::v2s_mt_nt5::core::implementation::thread_data>::reset(boost::log::v2s_mt_nt5::core::implementation::thread_data*)':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:105: undefined reference to `boost::detail::set_tss_data(void const*, boost::shared_ptr<boost::detail::tss_cleanup_function>, void*, bool)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(record_ostream.o): In function `get':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:84: undefined reference to `boost::detail::get_tss_data(void const*)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(record_ostream.o): In function `reset':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:105: undefined reference to `boost::detail::set_tss_data(void const*, boost::shared_ptr<boost::detail::tss_cleanup_function>, void*, bool)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(record_ostream.o): In function `get':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:84: undefined reference to `boost::detail::get_tss_data(void const*)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(record_ostream.o): In function `reset':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:105: undefined reference to `boost::detail::set_tss_data(void const*, boost::shared_ptr<boost::detail::tss_cleanup_function>, void*, bool)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(record_ostream.o): In function `~thread_specific_ptr':
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:79: undefined reference to `boost::detail::set_tss_data(void const*, boost::shared_ptr<boost::detail::tss_cleanup_function>, void*, bool)'
D:\c++\boost_1_58_0/./boost/thread/tss.hpp:79: undefined reference to `boost::detail::set_tss_data(void const*, boost::shared_ptr<boost::detail::tss_cleanup_function>, void*, bool)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(severity_level.o): In function `void boost::this_thread::at_thread_exit<boost::_bi::bind_t<boost::_bi::unspecified, boost::checked_deleter<unsigned long long>, boost::_bi::list1<boost::_bi::value<unsigned long long*> > > >(boost::_bi::bind_t<boost::_bi::unspecified, boost::checked_deleter<unsigned long long>, boost::_bi::list1<boost::_bi::value<unsigned long long*> > >)':
D:\c++\boost_1_58_0/./boost/thread/detail/thread.hpp:861: undefined reference to `boost::detail::add_thread_exit_function(boost::detail::thread_exit_function_base*)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(once_block.o): In function `boost::detail::basic_cv_list_entry::wait(boost::detail::timeout)':
D:\c++\boost_1_58_0/./boost/thread/win32/condition_variable.hpp:94: undefined reference to `boost::this_thread::interruptible_wait(void*, boost::detail::timeout)'
D:\c++\boost_1_58_0\bin.v2\libs\log\build\gcc-mingw-5.1.0\debug\link-static\threading-multi/libboost_log-mgw51-mt-d-1_58.a(thread_id.o): In function `at_thread_exit<boost::log::v2s_mt_nt5::aux::this_thread::(anonymous namespace)::id_storage::deleter>':
D:\c++\boost_1_58_0/./boost/thread/detail/thread.hpp:861: undefined reference to `boost::detail::add_thread_exit_function(boost::detail::thread_exit_function_base*)'
collect2.exe: error: ld returned 1 exit status
My linked libraries looks like this.
My include declarations looks like this
Also my boost include folder is located in main x86_64-w64-mingw32 include folder

Had the same error under Windows 10, Cygwin GCC setup. I had to link boost_thread separately in addition to boost_log and boost_log_setup.
-lboost_log_setup -lboost_log -lboost_thread
I was using BOOST 1.66.

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